RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 NBPF12Q5TAG4 269 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 OXER1Q8TDS5 423 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 NCLNQ969V3 563 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 SPON2Q9BUD6 331 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 INTS2Q9H0H0 1204 aaKnown RBP12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZMYM2Q9UBW7 1377 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 TMEM120BA0PK00 339 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 KLHL2O95198 593 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 RPA1P27694 616 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 OR1G1P47890 313 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 TAF2Q6P1X5 1199 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 CDKL3Q8IVW4 592 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 FAF2Q96CS3 445 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZNF512Q96ME7 567 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 AGBL1Q96MI9 1066 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 IDI2Q9BXS1 227 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 ADNPQ9H2P0 1102 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZNF212Q9UDV6 495 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 MAGED2Q9UNF1 606 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 LRCH1Q9Y2L9 728 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 SLC4A1P02730 911 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 ADORA2BP29275 332 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 PRCPP42785 496 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZNF235Q14590 738 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 WDR72Q3MJ13 1102 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 CYP4A22Q5TCH4 519 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 RAD9BQ6WBX8 426 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 MYLK4Q86YV6 388 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 OR2W6PQ8NHA6 318 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 OMA1Q96E52 524 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 FAM163AQ96GL9 167 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 ISCUQ9H1K1 167 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 KCNH7Q9NS40 1196 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 CPA4Q9UI42 421 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 ANAPC7Q9UJX3 599 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZC3H4Q9UPT8 1303 aaKnown RBP12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 EIF3DO15371 548 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 TCF7P36402 384 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 KIF1AQ12756 1690 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 Q4G0T1 1027 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 TLK2Q86UE8 772 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 LRRC34Q8IZ02 419 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 NKX2-3Q8TAU0 364 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 CDCA5Q96FF9 252 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 FAM192AQ9GZU8 254 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZMYND8Q9ULU4 1186 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 PCDHB12Q9Y5F1 795 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 CCDC195A0A1B0GUA6 201 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 TRIM49BA6NDI0 452 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZNF839A8K0R7 811 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 PSMD3O43242 534 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 FSBPO95073 299 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 DSG3P32926 999 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 ROR2Q01974 943 aaKnown RBP12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 LRRC8EQ6NSJ5 796 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 ELOA2Q8IYF1 753 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 DAGLBQ8NCG7 672 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 TRIM54Q9BYV2 358 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 WNT8AQ9H1J5 351 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 FBXO2Q9UK22 296 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 DTNAQ9Y4J8 743 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 TRIM17Q9Y577 477 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 SNX9Q9Y5X1 595 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 RAB14P61106 215 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 DMPKQ09013 629 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 NANOGNBQ7Z5D8 188 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 RFFLQ8WZ73 363 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 TRIM63Q969Q1 353 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 TMEM143Q96AN5 459 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 CHP1Q99653 195 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 MKNK1Q9BUB5 465 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 RBM12Q9NTZ6 932 aaKnown RBP12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 DSEQ9UL01 958 aa12.8□□□□□ -0.36
PCDHGA6-201ENST00000517434 HNRNPCL2B2RXH8 293 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 O00370 1275 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 P4HA2O15460 535 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 URODP06132 367 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 ODC1P11926 461 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 VCAM1P19320 739 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 TAF6P49848 677 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 ALDH18A1P54886 795 aaKnown RBP12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 PDIA2Q13087 525 aaKnown RBP12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 CCDC85BQ15834 202 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 IZUMO3Q5VZ72 239 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 C15orf52Q6ZUT6 534 aaKnown RBP12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 SYDE1Q6ZW31 735 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 REXO1L1PQ8IX06 675 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 NMD3Q96D46 503 aaKnown RBP12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 YME1L1Q96TA2 773 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 VPS11Q9H270 941 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 KIF20BQ96Q89 1820 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 CLPTM1O96005 669 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 ACTR2P61160 394 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 GPR141Q7Z602 305 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 TBC1D19Q8N5T2 526 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 SHCBP1Q8NEM2 672 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 HSPH1Q92598 858 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 TUBE1Q9UJT0 475 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms