RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 OR10T2Q8NGX3 314 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 SPPL2BQ8TCT7 592 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 PNMA5Q96PV4 448 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 ZCWPW1Q9H0M4 648 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 EBF3Q9H4W6 596 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.42■□□□□ 0.06
VARS-228ENST00000495010 VPS45Q9NRW7 570 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 TBX20Q9UMR3 447 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 GREB1Q4ZG55 1949 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 CYB561D2O14569 222 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 TRDMT1O14717 391 aaKnown RBP15.41■□□□□ 0.06
VARS-228ENST00000495010 RNF40O75150 1001 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 FAM13AO94988 1023 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 CYP11A1P05108 521 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 ATF6P18850 670 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 DDX6P26196 483 aaKnown RBP eCLIP15.41■□□□□ 0.06
VARS-228ENST00000495010 MPLP40238 635 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 ELF2Q15723 593 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 RNF43Q68DV7 783 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 MCTP1Q6DN14 999 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 FSTL4Q6MZW2 842 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 PKN3Q6P5Z2 889 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 DCP1BQ8IZD4 617 aaKnown RBP15.41■□□□□ 0.06
VARS-228ENST00000495010 MAB21L3Q8N8X9 362 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 FAM83CQ9BQN1 747 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 PYM1Q9BRP8 204 aaKnown RBP15.41■□□□□ 0.06
VARS-228ENST00000495010 KIF9Q9HAQ2 790 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 IL21Q9HBE4 155 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 SH2B1Q9NRF2 756 aaPredicted RBP15.41■□□□□ 0.06
VARS-228ENST00000495010 RXFP3Q9NSD7 469 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 ABI2Q9NYB9 513 aaPredicted RBP15.41■□□□□ 0.06
VARS-228ENST00000495010 ODF2LQ9ULJ1 636 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 DERAQ9Y315 318 aa15.41■□□□□ 0.06
VARS-228ENST00000495010 MAP1BP46821 2468 aaKnown RBP15.4■□□□□ 0.06
VARS-228ENST00000495010 KIF26AQ9ULI4 1882 aaPredicted RBP15.4■□□□□ 0.06
VARS-228ENST00000495010 VWA3AA6NCI4 1184 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 TULP1O00294 542 aaPredicted RBP15.4■□□□□ 0.06
VARS-228ENST00000495010 PIRO00625 290 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 TM4SF5O14894 197 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 RHOBTB1O94844 696 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 KCNK5O95279 499 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 EGFP01133 1207 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 KRT18P05783 430 aaKnown RBP15.4■□□□□ 0.06
VARS-228ENST00000495010 ADRB2P07550 413 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 NFICP08651 508 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 HAPLN1P10915 354 aaPredicted RBP15.4■□□□□ 0.06
VARS-228ENST00000495010 DRD1P21728 446 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 TAF6P49848 677 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 SHC2P98077 582 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 RILPL1Q5EBL4 403 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 TRIM68Q6AZZ1 485 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 MRPS31Q92665 395 aaKnown RBP15.4■□□□□ 0.06
VARS-228ENST00000495010 ZC3H10Q96K80 434 aaKnown RBP15.4■□□□□ 0.06
VARS-228ENST00000495010 P2RY13Q9BPV8 354 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 SMOC1Q9H4F8 434 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 ZHX3Q9H4I2 956 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 HPS4Q9NQG7 708 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 TDP1Q9NUW8 608 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 CPSF3Q9UKF6 684 aaKnown RBP15.4■□□□□ 0.06
VARS-228ENST00000495010 MAGED2Q9UNF1 606 aaPredicted RBP15.4■□□□□ 0.06
VARS-228ENST00000495010 KIF3AQ9Y496 699 aa15.4■□□□□ 0.06
VARS-228ENST00000495010 A0A0B4J269 797 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 FAM189A1O60320 539 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 PIGRP01833 764 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 ABCD1P33897 745 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 GALK1P51570 392 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 ATP2C1P98194 919 aaPredicted RBP15.39■□□□□ 0.05
VARS-228ENST00000495010 DHX8Q14562 1220 aaKnown RBP15.39■□□□□ 0.05
VARS-228ENST00000495010 KARSQ15046 597 aaKnown RBP15.39■□□□□ 0.05
VARS-228ENST00000495010 PDGFRLQ15198 375 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 FBXO43Q4G163 708 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 PLA2G2CQ5R387 149 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 GPBP1Q86WP2 473 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 CPA6Q8N4T0 437 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 TTC16Q8NEE8 873 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 USP13Q92995 863 aaPredicted RBP15.39■□□□□ 0.05
VARS-228ENST00000495010 CALML4Q96GE6 196 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 HHIPQ96QV1 700 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 REEP2Q9BRK0 252 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 LSM14BQ9BX40 385 aaKnown RBP15.39■□□□□ 0.05
VARS-228ENST00000495010 ASB7Q9H672 318 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 PARVGQ9HBI0 331 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 DPP3Q9NY33 737 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 CCL26Q9Y258 94 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 PCDHB5Q9Y5E4 795 aa15.39■□□□□ 0.05
VARS-228ENST00000495010 ANO9A1A5B4 782 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 SOBPA7XYQ1 873 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 TRAK2O60296 914 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 NEFLP07196 543 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 CSH1P0DML2 217 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 CSH2P0DML3 217 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 NMT1P30419 496 aaKnown RBP15.38■□□□□ 0.05
VARS-228ENST00000495010 ACOT2P49753 483 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 NLRP12P59046 1061 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 TSPY1Q01534 308 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 CREB5Q02930 508 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 PSMD2Q13200 908 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 SV2CQ496J9 727 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 PLK5Q496M5 336 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 TMEM119Q4V9L6 283 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms