RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 PTPRDP23468 1912 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 LRRC10BA6NIK2 292 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 CBFA2T2O43439 604 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 LILRB3O75022 631 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 CLASP2O75122 1294 aaKnown RBP12.16□□□□□ -0.46
NUP50-216ENST00000486184 LRRN2O75325 713 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 PDGFRBP09619 1106 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 SLC9A1P19634 815 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 ACAT1P24752 427 aaKnown RBP12.16□□□□□ -0.46
NUP50-216ENST00000486184 PON1P27169 355 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 ELF1P32519 619 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 CDH8P55286 799 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 UBASH3AP57075 661 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 FANCCQ00597 558 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 ROR1Q01973 937 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 GCNT1Q02742 428 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 MAPRE1Q15691 268 aaKnown RBP12.16□□□□□ -0.46
NUP50-216ENST00000486184 CCDC85BQ15834 202 aaPredicted RBP12.16□□□□□ -0.46
NUP50-216ENST00000486184 SLC39A12Q504Y0 691 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 LIN9Q5TKA1 542 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 SLC8B1Q6J4K2 584 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 ENOSF1Q7L5Y1 443 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 KBTBD7Q8WVZ9 684 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 TNIP3Q96KP6 325 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 SYT15Q9BQS2 421 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 LSM14BQ9BX40 385 aaKnown RBP12.16□□□□□ -0.46
NUP50-216ENST00000486184 UBE2TQ9NPD8 197 aaPredicted RBP12.16□□□□□ -0.46
NUP50-216ENST00000486184 APEX2Q9UBZ4 518 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 CDH9Q9ULB4 789 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 STXBP5LQ9Y2K9 1186 aa12.16□□□□□ -0.46
NUP50-216ENST00000486184 GABRDO14764 452 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 OR4Q2P0C623 313 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 RFX1P22670 979 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 CLCN4P51793 760 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 NDST1P52848 882 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 PSMC1P62191 440 aaKnown RBP12.15□□□□□ -0.46
NUP50-216ENST00000486184 HYAL1Q12794 435 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 SMARCB1Q12824 385 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 RAB33AQ14088 237 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 SYCP1Q15431 976 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 NFE2Q16621 373 aaPredicted RBP12.15□□□□□ -0.46
NUP50-216ENST00000486184 INTS6LQ5JSJ4 861 aaKnown RBP12.15□□□□□ -0.46
NUP50-216ENST00000486184 TPGS2Q68CL5 300 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 RRAGAQ7L523 313 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 LIMS2Q7Z4I7 341 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 UNC93AQ86WB7 457 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 OSTM1Q86WC4 334 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 ARHGEF19Q8IW93 802 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 EFHBQ8N7U6 833 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 NEK11Q8NG66 645 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 OR10T2Q8NGX3 314 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 ZNF461Q8TAF7 563 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 LMO3Q8TAP4 145 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 CASP10Q92851 521 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 ARID3AQ99856 593 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 NT5C1AQ9BXI3 368 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 ZCWPW1Q9H0M4 648 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 SDCBP2Q9H190 292 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 CISHQ9NSE2 258 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 CLDND1Q9NY35 253 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 BARX2Q9UMQ3 279 aaPredicted RBP12.15□□□□□ -0.46
NUP50-216ENST00000486184 LAMA3Q16787 3333 aa12.15□□□□□ -0.46
NUP50-216ENST00000486184 ATP8B3O60423 1300 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 CHD7Q9P2D1 2997 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 A0A1B0GTH6 734 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 WDR27A2RRH5 827 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 PRRG1O14668 218 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 ADAM12O43184 909 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 TGM5O43548 720 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 TBC1D4O60343 1298 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 CILPO75339 1184 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 C1RP00736 705 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 KRT5P13647 590 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 LMO2P25791 158 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 GTF2F1P35269 517 aaKnown RBP eCLIP12.14□□□□□ -0.47
NUP50-216ENST00000486184 USP8P40818 1118 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 CYP27A1Q02318 531 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 ADCY1Q08828 1119 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 INCA1Q0VD86 236 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 GPR17Q13304 367 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 RAPGEF1Q13905 1077 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 ARHGAP44Q17R89 818 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 PHLDB3Q6NSJ2 640 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 RSPO2Q6UXX9 243 aaPredicted RBP12.14□□□□□ -0.47
NUP50-216ENST00000486184 C4orf50Q6ZRC1 276 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 CCDC149Q6ZUS6 474 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 SPATA2LQ8IUW3 424 aaPredicted RBP12.14□□□□□ -0.47
NUP50-216ENST00000486184 KREMEN2Q8NCW0 462 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 MAFAQ8NHW3 353 aaPredicted RBP12.14□□□□□ -0.47
NUP50-216ENST00000486184 C2orf15Q8WU43 125 aaKnown RBP12.14□□□□□ -0.47
NUP50-216ENST00000486184 JAKMIP2Q96AA8 810 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 PGLYRP2Q96PD5 576 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 ERGIC2Q96RQ1 377 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 TMEM209Q96SK2 561 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 RTP3Q9BQQ7 232 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 PLEKHA4Q9H4M7 779 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 CYP4F11Q9HBI6 524 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 MAN1C1Q9NR34 630 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 FAM207AQ9NSI2 230 aaPredicted RBP12.14□□□□□ -0.47
NUP50-216ENST00000486184 DZANK1Q9NVP4 752 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms