RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-208ENST00000477234 LRRC3Q9BY71 257 aa13.35□□□□□ -0.27
SBF1-208ENST00000477234 CCDC86Q9H6F5 360 aaKnown RBP13.35□□□□□ -0.27
SBF1-208ENST00000477234 GOLGA2P5Q9HBQ8 144 aa13.35□□□□□ -0.27
SBF1-208ENST00000477234 SCUBE2Q9NQ36 999 aa13.35□□□□□ -0.27
SBF1-208ENST00000477234 GKN1Q9NS71 199 aa13.35□□□□□ -0.27
SBF1-208ENST00000477234 KLK13Q9UKR3 277 aa13.35□□□□□ -0.27
SBF1-208ENST00000477234 TNFSF13BQ9Y275 285 aa13.35□□□□□ -0.27
SBF1-208ENST00000477234 NCANO14594 1321 aa13.35□□□□□ -0.27
SBF1-208ENST00000477234 AKAP13Q12802 2813 aa13.35□□□□□ -0.27
SBF1-208ENST00000477234 ASXL3Q9C0F0 2248 aa13.34□□□□□ -0.27
SBF1-208ENST00000477234 K7ERI5 159 aa13.34□□□□□ -0.27
SBF1-208ENST00000477234 BMP15O95972 392 aa13.34□□□□□ -0.27
SBF1-208ENST00000477234 LIG1P18858 919 aa13.34□□□□□ -0.27
SBF1-208ENST00000477234 DHPSP49366 369 aaPredicted RBP13.34□□□□□ -0.27
SBF1-208ENST00000477234 CACNB1Q02641 598 aaPredicted RBP13.34□□□□□ -0.27
SBF1-208ENST00000477234 C19orf57Q0VDD7 668 aa13.34□□□□□ -0.27
SBF1-208ENST00000477234 DNAJB7Q7Z6W7 309 aaPredicted RBP13.34□□□□□ -0.27
SBF1-208ENST00000477234 SYT12Q8IV01 421 aa13.34□□□□□ -0.27
SBF1-208ENST00000477234 CPA6Q8N4T0 437 aa13.34□□□□□ -0.27
SBF1-208ENST00000477234 RPLP0P6Q8NHW5 317 aa13.34□□□□□ -0.27
SBF1-208ENST00000477234 PIGKQ92643 395 aa13.34□□□□□ -0.27
SBF1-208ENST00000477234 KIFAP3Q92845 792 aa13.34□□□□□ -0.27
SBF1-208ENST00000477234 FAM83CQ9BQN1 747 aa13.34□□□□□ -0.27
SBF1-208ENST00000477234 SCAND2PQ9GZW5 306 aaPredicted RBP13.34□□□□□ -0.27
SBF1-208ENST00000477234 CCDC113Q9H0I3 377 aa13.34□□□□□ -0.27
SBF1-208ENST00000477234 TTC12Q9H892 705 aaPredicted RBP13.34□□□□□ -0.27
SBF1-208ENST00000477234 TUFT1Q9NNX1 390 aa13.34□□□□□ -0.27
SBF1-208ENST00000477234 GJB4Q9NTQ9 266 aa13.34□□□□□ -0.27
SBF1-208ENST00000477234 URB1O60287 2271 aaKnown RBP13.33□□□□□ -0.28
SBF1-208ENST00000477234 IGSF10Q6WRI0 2623 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 MEFVO15553 781 aaPredicted RBP13.33□□□□□ -0.28
SBF1-208ENST00000477234 MAP3K13O43283 966 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 XPOTO43592 962 aaKnown RBP13.33□□□□□ -0.28
SBF1-208ENST00000477234 OPHN1O60890 802 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 SMARCB1Q12824 385 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 DUSP4Q13115 394 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 CALCRLQ16602 461 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 PKN3Q6P5Z2 889 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 PIK3AP1Q6ZUJ8 805 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 GAREM2Q75VX8 874 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 MAEAQ7L5Y9 396 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 PIP4P1Q86T03 277 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 POTEDQ86YR6 584 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 CMTM8Q8IZV2 173 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 ERMNQ8TAM6 284 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 PIGOQ8TEQ8 1089 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 CNOT6LQ96LI5 555 aaKnown RBP13.33□□□□□ -0.28
SBF1-208ENST00000477234 CNTN3Q9P232 1028 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 KCNG1Q9UIX4 513 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 PCDHB9Q9Y5E1 797 aa13.33□□□□□ -0.28
SBF1-208ENST00000477234 ARHGEF35A5YM69 484 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 M0QZQ0 153 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 TK2O00142 265 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 DCLK1O15075 740 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 EGFP01133 1207 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 CYP11B2P19099 503 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 MUTP22033 750 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 GALK1P51570 392 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 GFPT1Q06210 699 aaPredicted RBP13.32□□□□□ -0.28
SBF1-208ENST00000477234 SCAPQ12770 1279 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 PSMD2Q13200 908 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 SEMA3BQ13214 749 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 NR5A1Q13285 461 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 SLC14A1Q13336 389 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 ORC2Q13416 577 aaPredicted RBP13.32□□□□□ -0.28
SBF1-208ENST00000477234 NPY5RQ15761 445 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 COL28A1Q2UY09 1125 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 ZNF568Q3ZCX4 644 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 HSF5Q4G112 596 aaPredicted RBP13.32□□□□□ -0.28
SBF1-208ENST00000477234 CENPPQ6IPU0 288 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 SLC23A3Q6PIS1 610 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 RAB44Q7Z6P3 723 aaPredicted RBP13.32□□□□□ -0.28
SBF1-208ENST00000477234 C2orf15Q8WU43 125 aaKnown RBP13.32□□□□□ -0.28
SBF1-208ENST00000477234 CD101Q93033 1021 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 LRRC3BQ96PB8 259 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 TSPAN18Q96SJ8 248 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 TCHPQ9BT92 498 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 MRPL4Q9BYD3 311 aaKnown RBP13.32□□□□□ -0.28
SBF1-208ENST00000477234 GPRC5CQ9NQ84 441 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 TDP1Q9NUW8 608 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 ITPR1Q14643 2758 aa13.32□□□□□ -0.28
SBF1-208ENST00000477234 TCHHQ07283 1943 aa13.31□□□□□ -0.28
SBF1-208ENST00000477234 MCF2P10911 925 aa13.31□□□□□ -0.28
SBF1-208ENST00000477234 ENGP17813 658 aa13.31□□□□□ -0.28
SBF1-208ENST00000477234 SOX4Q06945 474 aaPredicted RBP13.31□□□□□ -0.28
SBF1-208ENST00000477234 ZNF268Q14587 947 aaPredicted RBP13.31□□□□□ -0.28
SBF1-208ENST00000477234 DUOXA1Q1HG43 343 aa13.31□□□□□ -0.28
SBF1-208ENST00000477234 STXBP5Q5T5C0 1151 aa13.31□□□□□ -0.28
SBF1-208ENST00000477234 EEF1DP3Q658K8 133 aa13.31□□□□□ -0.28
SBF1-208ENST00000477234 C19orf48Q6RUI8 117 aa13.31□□□□□ -0.28
SBF1-208ENST00000477234 RASSF3Q86WH2 238 aa13.31□□□□□ -0.28
SBF1-208ENST00000477234 OXER1Q8TDS5 423 aa13.31□□□□□ -0.28
SBF1-208ENST00000477234 TNFRSF25Q93038 417 aa13.31□□□□□ -0.28
SBF1-208ENST00000477234 ATP2A3Q93084 1043 aa13.31□□□□□ -0.28
SBF1-208ENST00000477234 DNAJC25Q9H1X3 360 aa13.31□□□□□ -0.28
SBF1-208ENST00000477234 CXCL16Q9H2A7 254 aa13.31□□□□□ -0.28
SBF1-208ENST00000477234 EBF3Q9H4W6 596 aa13.31□□□□□ -0.28
SBF1-208ENST00000477234 PLEKHA5Q9HAU0 1116 aa13.31□□□□□ -0.28
SBF1-208ENST00000477234 TBX20Q9UMR3 447 aa13.31□□□□□ -0.28
SBF1-208ENST00000477234 SLC6A14Q9UN76 642 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms