RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 PPP2R3AQ06190 1150 aa20.58■□□□□ 0.89
NCKIPSD-209ENST00000470006 DMC1Q14565 340 aa20.58■□□□□ 0.89
NCKIPSD-209ENST00000470006 FBXO43Q4G163 708 aa20.58■□□□□ 0.89
NCKIPSD-209ENST00000470006 LRSAM1Q6UWE0 723 aa20.58■□□□□ 0.89
NCKIPSD-209ENST00000470006 DAW1Q8N136 415 aa20.58■□□□□ 0.89
NCKIPSD-209ENST00000470006 SNX29Q8TEQ0 813 aa20.58■□□□□ 0.89
NCKIPSD-209ENST00000470006 CHFRQ96EP1 664 aa20.58■□□□□ 0.89
NCKIPSD-209ENST00000470006 BICD1Q96G01 975 aa20.58■□□□□ 0.89
NCKIPSD-209ENST00000470006 PLEKHA5Q9HAU0 1116 aa20.58■□□□□ 0.89
NCKIPSD-209ENST00000470006 CCL26Q9Y258 94 aa20.58■□□□□ 0.89
NCKIPSD-209ENST00000470006 E9PMD0 336 aa20.57■□□□□ 0.88
NCKIPSD-209ENST00000470006 JAK2O60674 1132 aa20.57■□□□□ 0.88
NCKIPSD-209ENST00000470006 CLTAP09496 248 aa20.57■□□□□ 0.88
NCKIPSD-209ENST00000470006 AARSP49588 968 aaKnown RBP eCLIP20.57■□□□□ 0.88
NCKIPSD-209ENST00000470006 RING1Q06587 406 aa20.57■□□□□ 0.88
NCKIPSD-209ENST00000470006 USP39Q53GS9 565 aaKnown RBP20.57■□□□□ 0.88
NCKIPSD-209ENST00000470006 SYT13Q7L8C5 426 aa20.57■□□□□ 0.88
NCKIPSD-209ENST00000470006 CYP2U1Q7Z449 544 aa20.57■□□□□ 0.88
NCKIPSD-209ENST00000470006 DEFB124Q8NES8 71 aa20.57■□□□□ 0.88
NCKIPSD-209ENST00000470006 ACDQ96AP0 544 aa20.57■□□□□ 0.88
NCKIPSD-209ENST00000470006 RUSC1Q9BVN2 902 aa20.57■□□□□ 0.88
NCKIPSD-209ENST00000470006 IL21Q9HBE4 155 aa20.57■□□□□ 0.88
NCKIPSD-209ENST00000470006 HSFX1Q9UBD0 423 aa20.57■□□□□ 0.88
NCKIPSD-209ENST00000470006 ZMYM5Q9UJ78 669 aa20.57■□□□□ 0.88
NCKIPSD-209ENST00000470006 WASF3Q9UPY6 502 aa20.57■□□□□ 0.88
NCKIPSD-209ENST00000470006 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.57■□□□□ 0.88
NCKIPSD-209ENST00000470006 DSPP15924 2871 aaKnown RBP20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 SOBPA7XYQ1 873 aa20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 CYP3A5P20815 502 aa20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 CSRP1P21291 193 aaKnown RBP20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 SMTNP53814 917 aa20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 RAD51AP2Q09MP3 1159 aa20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 NSUN7Q8NE18 718 aaKnown RBP20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 TSTD1Q8NFU3 115 aa20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 GATA6Q92908 595 aa20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 USP13Q92995 863 aaPredicted RBP20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 GTF3C6Q969F1 213 aa20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 FAM212AQ96EL1 285 aa20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 SENP8Q96LD8 212 aa20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 TMEM121BQ9BXQ6 578 aaPredicted RBP20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 TPSD1Q9BZJ3 242 aa20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 TDP1Q9NUW8 608 aa20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 EBF1Q9UH73 591 aa20.56■□□□□ 0.88
NCKIPSD-209ENST00000470006 MYH11P35749 1972 aa20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 LACTBL1A8MY62 500 aa20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 PATE3B3GLJ2 98 aa20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 ATF6P18850 670 aa20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 NMT1P30419 496 aaKnown RBP20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 DHPSP49366 369 aaPredicted RBP20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 LILRA4P59901 499 aa20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 MCL1Q07820 350 aa20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 ORC2Q13416 577 aaPredicted RBP20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 GNL2Q13823 731 aaKnown RBP20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 ME3Q16798 604 aa20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 TTC38Q5R3I4 469 aa20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 NAIF1Q69YI7 327 aaPredicted RBP20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 RINT1Q6NUQ1 792 aa20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 C11orf74Q86VG3 221 aa20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 TTC30AQ86WT1 665 aa20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 CPA6Q8N4T0 437 aa20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 OR10T2Q8NGX3 314 aa20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 C17orf75Q9HAS0 396 aa20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 CIZ1Q9ULV3 898 aaPredicted RBP20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 STK24Q9Y6E0 443 aa20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 ANK1P16157 1881 aa20.55■□□□□ 0.88
NCKIPSD-209ENST00000470006 TTC26A0AVF1 554 aa20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 PPEF2O14830 753 aa20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 GJA4P35212 333 aa20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 TNFSF9P41273 254 aa20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 FXR2P51116 673 aaKnown RBP eCLIP20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 PDGFRLQ15198 375 aa20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 ZRSR1Q15695 479 aaKnown RBP20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 ZBTB6Q15916 424 aa20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 TXNDC8Q6A555 127 aa20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 ZPBP2Q6X784 338 aa20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 METTL23Q86XA0 190 aa20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 PIGKQ92643 395 aa20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 MRPS31Q92665 395 aaKnown RBP20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 CD101Q93033 1021 aa20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 RAB34Q9BZG1 259 aa20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 SLC32A1Q9H598 525 aa20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 KIF9Q9HAQ2 790 aa20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 ABI2Q9NYB9 513 aaPredicted RBP20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 KCNG1Q9UIX4 513 aa20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 MAGED2Q9UNF1 606 aaPredicted RBP20.54■□□□□ 0.88
NCKIPSD-209ENST00000470006 CDX4O14627 284 aaPredicted RBP20.53■□□□□ 0.88
NCKIPSD-209ENST00000470006 HYAL3O43820 417 aaPredicted RBP20.53■□□□□ 0.88
NCKIPSD-209ENST00000470006 DDX6P26196 483 aaKnown RBP eCLIP20.53■□□□□ 0.88
NCKIPSD-209ENST00000470006 IRX4P78413 519 aa20.53■□□□□ 0.88
NCKIPSD-209ENST00000470006 MAPK7Q13164 816 aa20.53■□□□□ 0.88
NCKIPSD-209ENST00000470006 KRT79Q5XKE5 535 aa20.53■□□□□ 0.88
NCKIPSD-209ENST00000470006 PMS2CLQ68D20 193 aa20.53■□□□□ 0.88
NCKIPSD-209ENST00000470006 THEM5Q8N1Q8 247 aa20.53■□□□□ 0.88
NCKIPSD-209ENST00000470006 RPF1Q9H9Y2 349 aaKnown RBP20.53■□□□□ 0.88
NCKIPSD-209ENST00000470006 DUS2Q9NX74 493 aaKnown RBP20.53■□□□□ 0.88
NCKIPSD-209ENST00000470006 DENND4CQ5VZ89 1909 aa20.53■□□□□ 0.88
NCKIPSD-209ENST00000470006 NBEAQ8NFP9 2946 aa20.52■□□□□ 0.88
NCKIPSD-209ENST00000470006 ASCC3Q8N3C0 2202 aaKnown RBP20.52■□□□□ 0.88
NCKIPSD-209ENST00000470006 MAPTP10636 758 aaKnown RBP20.52■□□□□ 0.88
NCKIPSD-209ENST00000470006 MAPK8P45983 427 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms