RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 MAMSTRQ6ZN01 415 aa14.31□□□□□ -0.12
CPSF4-210ENST00000469897 BRSK2Q8IWQ3 736 aa14.31□□□□□ -0.12
CPSF4-210ENST00000469897 C1orf127Q8N9H9 656 aa14.31□□□□□ -0.12
CPSF4-210ENST00000469897 SPPL2BQ8TCT7 592 aa14.31□□□□□ -0.12
CPSF4-210ENST00000469897 C2orf15Q8WU43 125 aaKnown RBP14.31□□□□□ -0.12
CPSF4-210ENST00000469897 PI4K2AQ9BTU6 479 aa14.31□□□□□ -0.12
CPSF4-210ENST00000469897 C8orf33Q9H7E9 229 aaPredicted RBP14.31□□□□□ -0.12
CPSF4-210ENST00000469897 PDE11AQ9HCR9 933 aa14.31□□□□□ -0.12
CPSF4-210ENST00000469897 PRMT8Q9NR22 394 aaPredicted RBP14.31□□□□□ -0.12
CPSF4-210ENST00000469897 OLFML3Q9NRN5 406 aa14.31□□□□□ -0.12
CPSF4-210ENST00000469897 RBAKQ9NYW8 714 aaPredicted RBP14.31□□□□□ -0.12
CPSF4-210ENST00000469897 NCDNQ9UBB6 729 aa14.31□□□□□ -0.12
CPSF4-210ENST00000469897 PCDHB5Q9Y5E4 795 aa14.31□□□□□ -0.12
CPSF4-210ENST00000469897 DOCK6Q96HP0 2047 aa14.31□□□□□ -0.12
CPSF4-210ENST00000469897 FRMD3A2A2Y4 597 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 STX6O43752 255 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 EXTL3O43909 919 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 PRPF40AO75400 957 aaKnown RBP14.3□□□□□ -0.12
CPSF4-210ENST00000469897 PRAMEF12O95522 483 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 KRT19P08727 400 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 HMGA1P17096 107 aaKnown RBP14.3□□□□□ -0.12
CPSF4-210ENST00000469897 ACAT1P24752 427 aaKnown RBP14.3□□□□□ -0.12
CPSF4-210ENST00000469897 CDC25CP30307 473 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 PNPLA4P41247 253 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 CXCL12P48061 93 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 GPR15P49685 360 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 TNK2Q07912 1038 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 DDR2Q16832 855 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 ARHGAP29Q52LW3 1261 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 SDHAF4Q5VUM1 108 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 TXNDC11Q6PKC3 985 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 ERMP1Q7Z2K6 904 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 TMEM150AQ86TG1 271 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 PDCL2Q8N4E4 241 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 CXorf38Q8TB03 319 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 BPIFB1Q8TDL5 484 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 HPS3Q969F9 1004 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 GCNAQ96QF7 691 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 TMEM206Q9H813 350 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 DDX43Q9NXZ2 648 aaKnown RBP14.3□□□□□ -0.12
CPSF4-210ENST00000469897 GTF3C4Q9UKN8 822 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 L1RE1Q9UN81 338 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 MAGED2Q9UNF1 606 aaPredicted RBP14.3□□□□□ -0.12
CPSF4-210ENST00000469897 CFAP54Q96N23 3096 aa14.3□□□□□ -0.12
CPSF4-210ENST00000469897 MYBPHLA2RUH7 354 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 SPECC1L-ADORA2AF8WAN1 911 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 HUS1O60921 280 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 F11P03951 625 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 TDGF1P13385 188 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 WEE1P30291 646 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 NASPP49321 788 aaPredicted RBP14.29□□□□□ -0.12
CPSF4-210ENST00000469897 CCR3P51677 355 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 NRLP54845 237 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 RBP5P82980 135 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 SATB1Q01826 763 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 BFSP1Q12934 665 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 PPP2R5DQ14738 602 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 STK38Q15208 465 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 WDR44Q5JSH3 913 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 LMBRD2Q68DH5 695 aaPredicted RBP14.29□□□□□ -0.12
CPSF4-210ENST00000469897 RALGPS2Q86X27 583 aaPredicted RBP14.29□□□□□ -0.12
CPSF4-210ENST00000469897 CCDC65Q8IXS2 484 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 CMTM8Q8IZV2 173 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 CELF5Q8N6W0 485 aaKnown RBP14.29□□□□□ -0.12
CPSF4-210ENST00000469897 MAB21L3Q8N8X9 362 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 LINC00301Q8NCQ3 95 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 STKLD1Q8NE28 680 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 GLIS3Q8NEA6 775 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 ZNF560Q96MR9 790 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 ACBD6Q9BR61 282 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 FAM126AQ9BYI3 521 aaPredicted RBP14.29□□□□□ -0.12
CPSF4-210ENST00000469897 EPC1Q9H2F5 836 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 GKN1Q9NS71 199 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 THG1LQ9NWX6 298 aaKnown RBP14.29□□□□□ -0.12
CPSF4-210ENST00000469897 OBP2AQ9NY56 170 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 SNX9Q9Y5X1 595 aa14.29□□□□□ -0.12
CPSF4-210ENST00000469897 K7ELQ4 463 aaPredicted RBP14.28□□□□□ -0.12
CPSF4-210ENST00000469897 HCRTO43612 131 aa14.28□□□□□ -0.12
CPSF4-210ENST00000469897 PTPRZ1P23471 2315 aaPredicted RBP14.28□□□□□ -0.12
CPSF4-210ENST00000469897 CYP2F1P24903 491 aa14.28□□□□□ -0.12
CPSF4-210ENST00000469897 NLRP12P59046 1061 aa14.28□□□□□ -0.12
CPSF4-210ENST00000469897 TSPY1Q01534 308 aa14.28□□□□□ -0.12
CPSF4-210ENST00000469897 DMWDQ09019 674 aa14.28□□□□□ -0.12
CPSF4-210ENST00000469897 ALCAMQ13740 583 aa14.28□□□□□ -0.12
CPSF4-210ENST00000469897 PON2Q15165 354 aa14.28□□□□□ -0.12
CPSF4-210ENST00000469897 LPAL2Q16609 132 aa14.28□□□□□ -0.12
CPSF4-210ENST00000469897 FOXD4L5Q5VV16 416 aaPredicted RBP14.28□□□□□ -0.12
CPSF4-210ENST00000469897 TXNDC8Q6A555 127 aa14.28□□□□□ -0.12
CPSF4-210ENST00000469897 GPD1LQ8N335 351 aa14.28□□□□□ -0.12
CPSF4-210ENST00000469897 SPEM1Q8N4L4 309 aa14.28□□□□□ -0.12
CPSF4-210ENST00000469897 LRRC52Q8N7C0 313 aa14.28□□□□□ -0.12
CPSF4-210ENST00000469897 FOXD4L4Q8WXT5 416 aaPredicted RBP14.28□□□□□ -0.12
CPSF4-210ENST00000469897 BACH2Q9BYV9 841 aa14.28□□□□□ -0.12
CPSF4-210ENST00000469897 SIX4Q9UIU6 781 aa14.28□□□□□ -0.12
CPSF4-210ENST00000469897 ITGA11Q9UKX5 1188 aa14.28□□□□□ -0.12
CPSF4-210ENST00000469897 SMG5Q9UPR3 1016 aaKnown RBP14.28□□□□□ -0.12
CPSF4-210ENST00000469897 CCL26Q9Y258 94 aa14.28□□□□□ -0.12
CPSF4-210ENST00000469897 MORC2Q9Y6X9 1032 aaPredicted RBP14.28□□□□□ -0.12
CPSF4-210ENST00000469897 ZNF233A6NK53 670 aa14.27□□□□□ -0.13
CPSF4-210ENST00000469897 SPTLC2O15270 562 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms