RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 RPS12P25398 132 aaKnown RBP13□□□□□ -0.33
USP11-206ENST00000469080 HOXD11P31277 338 aaPredicted RBP13□□□□□ -0.33
USP11-206ENST00000469080 DMPKQ09013 629 aa13□□□□□ -0.33
USP11-206ENST00000469080 BTG3Q14201 252 aaPredicted RBP13□□□□□ -0.33
USP11-206ENST00000469080 MAPK6Q16659 721 aa13□□□□□ -0.33
USP11-206ENST00000469080 FIZ1Q96SL8 496 aa13□□□□□ -0.33
USP11-206ENST00000469080 RABL2AQ9UBK7 228 aaPredicted RBP13□□□□□ -0.33
USP11-206ENST00000469080 AFG3L2Q9Y4W6 797 aa13□□□□□ -0.33
USP11-206ENST00000469080 O00370 1275 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 P4HA2O15460 535 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 NPM3O75607 178 aaKnown RBP12.99□□□□□ -0.33
USP11-206ENST00000469080 ARIH2O95376 493 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 MYL6P60660 151 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 CALCOCO2Q13137 446 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 NCOA4Q13772 614 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 ASTE1Q2TB18 679 aaPredicted RBP12.99□□□□□ -0.33
USP11-206ENST00000469080 EMC1Q8N766 993 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 PSPC1Q8WXF1 523 aaKnown RBP12.99□□□□□ -0.33
USP11-206ENST00000469080 ABHD8Q96I13 439 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 SIKE1Q9BRV8 207 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 KLK14Q9P0G3 267 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 SAE1Q9UBE0 346 aaPredicted RBP12.99□□□□□ -0.33
USP11-206ENST00000469080 TSKSQ9UJT2 592 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 ZNF148Q9UQR1 794 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 COL4A5P29400 1685 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 UBOX5O94941 541 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 GLRA2P23416 452 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 NFKBIAP25963 317 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 KIZQ2M2Z5 673 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 NETO2Q8NC67 525 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 SEPT1Q8WYJ6 367 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 PCDH18Q9HCL0 1135 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 SH3GLB1Q9Y371 365 aa12.99□□□□□ -0.33
USP11-206ENST00000469080 ANKRD62A6NC57 917 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 C19orf81C9J6K1 198 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 DKC1O60832 514 aaKnown RBP eCLIP12.98□□□□□ -0.33
USP11-206ENST00000469080 CST3P01034 146 aaPredicted RBP12.98□□□□□ -0.33
USP11-206ENST00000469080 PRKCBP05771 671 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 PYGMP11217 842 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 KCNA2P16389 499 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 GTF2H1P32780 548 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 MSH2P43246 934 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 NOP14P78316 857 aaKnown RBP12.98□□□□□ -0.33
USP11-206ENST00000469080 NFX1Q12986 1120 aaKnown RBP12.98□□□□□ -0.33
USP11-206ENST00000469080 RCN2Q14257 317 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 C10orf76Q5T2E6 689 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 FKBP1CQ5VVH2 108 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 GRAMD4Q6IC98 578 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 MAP7D3Q8IWC1 876 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 UBA3Q8TBC4 463 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 MDM1Q8TC05 714 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 NEK9Q8TD19 979 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 CDHR1Q96JP9 859 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 EDEM3Q9BZQ6 932 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 MTUS1Q9ULD2 1270 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 DYNC1LI2O43237 492 aaPredicted RBP12.98□□□□□ -0.33
USP11-206ENST00000469080 CXCL8P10145 99 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 HOXD12P35452 270 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 CYP24A1Q07973 514 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 LRRC14Q15048 493 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 FAM160B1Q5W0V3 765 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 CCDC137Q6PK04 289 aaKnown RBP12.98□□□□□ -0.33
USP11-206ENST00000469080 TRPM8Q7Z2W7 1104 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 APBB1IPQ7Z5R6 666 aaPredicted RBP12.98□□□□□ -0.33
USP11-206ENST00000469080 WDR75Q8IWA0 830 aaKnown RBP12.98□□□□□ -0.33
USP11-206ENST00000469080 DNAJC9Q8WXX5 260 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 TRAPPC9Q96Q05 1148 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 LBHD1Q9BQE6 289 aaPredicted RBP12.98□□□□□ -0.33
USP11-206ENST00000469080 CALN1Q9BXU9 219 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 ETNK2Q9NVF9 386 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 ARHGEF38Q9NXL2 777 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 POLIQ9UNA4 740 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 EIF3FO00303 357 aaPredicted RBP12.98□□□□□ -0.33
USP11-206ENST00000469080 HNRNPH3P31942 346 aaKnown RBP12.98□□□□□ -0.33
USP11-206ENST00000469080 ADCYAP1R1P41586 468 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 CACNA2D1P54289 1103 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 BSPRYQ5W0U4 402 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 NT5DC3Q86UY8 548 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 C1orf131Q8NDD1 294 aaKnown RBP12.98□□□□□ -0.33
USP11-206ENST00000469080 EPS8L1Q8TE68 723 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 AFG1LQ8WV93 481 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 OXCT2Q9BYC2 517 aaPredicted RBP12.98□□□□□ -0.33
USP11-206ENST00000469080 ABCF3Q9NUQ8 709 aa12.98□□□□□ -0.33
USP11-206ENST00000469080 MKI67P46013 3256 aaKnown RBP12.98□□□□□ -0.33
USP11-206ENST00000469080 TLR3O15455 904 aaKnown RBP12.97□□□□□ -0.33
USP11-206ENST00000469080 PENKP01210 267 aaPredicted RBP12.97□□□□□ -0.33
USP11-206ENST00000469080 ATP6V1C1P21283 382 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 CDK17Q00537 523 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 COL24A1Q17RW2 1714 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 TMEM192Q8IY95 271 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 IQCKQ8N0W5 287 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 CHMP6Q96FZ7 201 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 FMO2Q99518 471 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 NEUROG2Q9H2A3 272 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 FAM49BQ9NUQ9 324 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 A0A087WZ62 844 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 CYP2B6P20813 491 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 FECHP22830 423 aa12.97□□□□□ -0.33
USP11-206ENST00000469080 YARSP54577 528 aaKnown RBP12.97□□□□□ -0.33
USP11-206ENST00000469080 OXCT1P55809 520 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms