RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 GCNT3O95395 438 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 C22orf31O95567 290 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 RECKO95980 971 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 RNASE1P07998 156 aaKnown RBP5.99□□□□□ -1.45
VPS41-211ENST00000466017 INSRRP14616 1297 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 GLRA2P23416 452 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 KLRC1P26715 233 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 TMOD1P28289 359 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 HOXD13P35453 343 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 NPTX2P47972 431 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 DNM2P50570 870 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 EFNA5P52803 228 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 PMS1P54277 932 aaKnown RBP5.99□□□□□ -1.45
VPS41-211ENST00000466017 HTRA3P83110 453 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 PURAQ00577 322 aaKnown RBP5.99□□□□□ -1.45
VPS41-211ENST00000466017 FANCCQ00597 558 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 SP4Q02446 784 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 PRKCQQ04759 706 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 CLCQ05315 142 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 TNK2Q07912 1038 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 CCDC173Q0VFZ6 552 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 DMP1Q13316 513 aaPredicted RBP5.99□□□□□ -1.45
VPS41-211ENST00000466017 NR1I3Q14994 352 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 EMC2Q15006 297 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 PKN2Q16513 984 aaKnown RBP5.99□□□□□ -1.45
VPS41-211ENST00000466017 FSCN1Q16658 493 aaKnown RBP5.99□□□□□ -1.45
VPS41-211ENST00000466017 TPD52L1Q16890 204 aaPredicted RBP5.99□□□□□ -1.45
VPS41-211ENST00000466017 TCP11X2Q5H9J9 407 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 GJC2Q5T442 439 aaPredicted RBP5.99□□□□□ -1.45
VPS41-211ENST00000466017 SLC6A19Q695T7 634 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 MTHFD1LQ6UB35 978 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 HS2ST1Q7LGA3 356 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 REC114Q7Z4M0 266 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 FRMD5Q7Z6J6 570 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 CSGALNACT2Q8N6G5 542 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 MFSD2AQ8NA29 543 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 ANKRD20A12PQ8NF67 263 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 PSPC1Q8WXF1 523 aaKnown RBP5.99□□□□□ -1.45
VPS41-211ENST00000466017 MTG1Q9BT17 334 aaPredicted RBP5.99□□□□□ -1.45
VPS41-211ENST00000466017 GBP3Q9H0R5 595 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 C2orf40Q9H1Z8 148 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 METTL14Q9HCE5 456 aaKnown RBP5.99□□□□□ -1.45
VPS41-211ENST00000466017 ATP13A1Q9HD20 1204 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 KMT5AQ9NQR1 393 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 PRDM5Q9NQX1 630 aaPredicted RBP5.99□□□□□ -1.45
VPS41-211ENST00000466017 SAMSN1Q9NSI8 373 aaKnown RBP5.99□□□□□ -1.45
VPS41-211ENST00000466017 DDX20Q9UHI6 824 aaKnown RBP5.99□□□□□ -1.45
VPS41-211ENST00000466017 PTPN22Q9Y2R2 807 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 CAPN6Q9Y6Q1 641 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 SYNRGQ9UMZ2 1314 aa5.99□□□□□ -1.45
VPS41-211ENST00000466017 MYH11P35749 1972 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 KAT6AQ92794 2004 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 TMEM150BA6NC51 233 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 K7ERI5 159 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 PMM2O15305 246 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 SLC16A3O15427 465 aaKnown RBP5.98□□□□□ -1.45
VPS41-211ENST00000466017 AP5Z1O43299 807 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 ADCY5O95622 1261 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 LDHAP00338 332 aaKnown RBP5.98□□□□□ -1.45
VPS41-211ENST00000466017 TPM3P06753 285 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 MYBP10242 640 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 CDK11BP21127 795 aaKnown RBP5.98□□□□□ -1.45
VPS41-211ENST00000466017 NMT1P30419 496 aaKnown RBP5.98□□□□□ -1.45
VPS41-211ENST00000466017 IRAK1P51617 712 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 ZNF75DP51815 510 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 CASP5P51878 434 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 PEX3P56589 373 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 STX17P56962 302 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 UBASH3AP57075 661 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 PTENP60484 403 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 ADAM9Q13443 819 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 TFDP1Q14186 410 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 LRRC41Q15345 812 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 FILIP1LQ4L180 1135 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 HS1BP3Q53T59 392 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 TMEM201Q5SNT2 666 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 MARCH8Q5T0T0 291 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 FAM102BQ5T8I3 360 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 CDCA2Q69YH5 1023 aaPredicted RBP5.98□□□□□ -1.45
VPS41-211ENST00000466017 SLFN12LQ6IEE8 588 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 KLHL10Q6JEL2 608 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 EFCAB12Q6NXP0 572 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 TAF2Q6P1X5 1199 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 NFRKBQ6P4R8 1299 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 ZPBP2Q6X784 338 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 LRRC55Q6ZSA7 311 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 SRGAP1Q7Z6B7 1085 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 RNF180Q86T96 592 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 ZNF410Q86VK4 478 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 ARRDC4Q8NCT1 418 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 FAM13CQ8NE31 585 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 HPS3Q969F9 1004 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 IQCDQ96DY2 449 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 BORCS6Q96GS4 357 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 FBXL18Q96ME1 805 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 POLR3FQ9H1D9 316 aaPredicted RBP5.98□□□□□ -1.45
VPS41-211ENST00000466017 FZD8Q9H461 694 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 ZHX3Q9H4I2 956 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 KIAA1586Q9HCI6 787 aa5.98□□□□□ -1.45
VPS41-211ENST00000466017 GPRC5CQ9NQ84 441 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms