RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 HS3ST4Q9Y661 456 aa4.89□□□□□ -1.63
HMGN3P1-201ENST00000453847 TTBK1Q5TCY1 1321 aaPredicted RBP4.89□□□□□ -1.63
HMGN3P1-201ENST00000453847 LMTK3Q96Q04 1460 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 TEX51A0A1B0GUA7 166 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 A6NCN8 305 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 H7C4K7 107 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 RAB27BO00194 218 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 MATN2O00339 956 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 PCDH17O14917 1159 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 DCLK1O15075 740 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 CYP7B1O75881 506 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 RASSF9O75901 435 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 PRSS23O95084 383 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 KIF20AO95235 890 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 NPPBP16860 134 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 SLC6A2P23975 617 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 ACVR2AP27037 513 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 POU6F2P78424 691 aaPredicted RBP4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 FHL3Q13643 280 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 EFR3AQ14156 821 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 FAM214AQ32MH5 1076 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 GAGE13Q4V321 117 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 SLC44A4Q53GD3 710 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 USP30Q70CQ3 517 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 CCDC28AQ8IWP9 274 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 YAF2Q8IY57 180 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 PCYOX1LQ8NBM8 494 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 DNERQ8NFT8 737 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 OR14K1Q8NGZ2 314 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 LPPQ93052 612 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 SCAMP4Q969E2 229 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 PWWP2AQ96N64 755 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 KLHL32Q96NJ5 620 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 PRPF18Q99633 342 aaKnown RBP4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 AGO3Q9H9G7 860 aaKnown RBP4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 PRDM8Q9NQV8 689 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 TMEM160Q9NX00 188 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 CLIC5Q9NZA1 410 aa4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 HERC5Q9UII4 1024 aaKnown RBP4.88□□□□□ -1.63
HMGN3P1-201ENST00000453847 M0QYG6 137 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 FCHO1O14526 889 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 PJA2O43164 708 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 HOXA3O43365 443 aaPredicted RBP4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 DNPH1O43598 174 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 TIMM44O43615 452 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 ADAM23O75077 832 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 AGFG2O95081 481 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 AMHP03971 560 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 ATICP31939 592 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 ELF1P32519 619 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 KCNAB1Q14722 419 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 KCNMB1Q16558 191 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 BMT2Q1RMZ1 405 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 ZIK1Q3SY52 487 aaPredicted RBP4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 ARL6IP4Q66PJ3 421 aaKnown RBP4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 XYLT1Q86Y38 959 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 ZNF280BQ86YH2 543 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 REXO1L1PQ8IX06 675 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 NGDNQ8NEJ9 315 aaKnown RBP4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 FAM46DQ8NEK8 389 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 CSGALNACT1Q8TDX6 532 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 HTRA1Q92743 480 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 MBD6Q96DN6 1003 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 KCNC2Q96PR1 638 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 PYM1Q9BRP8 204 aaKnown RBP4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 LSM14BQ9BX40 385 aaKnown RBP4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 HEYLQ9NQ87 328 aaPredicted RBP4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 ADAM29Q9UKF5 820 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 HDAC9Q9UKV0 1011 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 MTO1Q9Y2Z2 717 aaKnown RBP4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 PAXBP1Q9Y5B6 917 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 ITIH6Q6UXX5 1313 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 CARMIL2Q6F5E8 1435 aa4.87□□□□□ -1.63
HMGN3P1-201ENST00000453847 UBE2QL1A1L167 161 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 TBKBP1A7MCY6 615 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 NRP1O14786 923 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 DHHO43323 396 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 ZNF500O60304 480 aaPredicted RBP4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 SOAT2O75908 522 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 USP1O94782 785 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 ACTL6BO94805 426 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 BAIAP3O94812 1187 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 HAUS5O94927 633 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 NTSR2O95665 410 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 ANXA1P04083 346 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 GNAI2P04899 355 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 CPT1AP50416 773 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 CLRN1P58418 232 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 RAP2BP61225 183 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 PTH1RQ03431 593 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 TLE2Q04725 743 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 SLFN5Q08AF3 891 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 NFYCQ13952 458 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 SLC29A2Q14542 456 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 USP10Q14694 798 aaKnown RBP4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 TOMM20Q15388 145 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 RNF151Q2KHN1 245 aa4.86□□□□□ -1.63
HMGN3P1-201ENST00000453847 SLC5A9Q2M3M2 681 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms