RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 TET1Q8NFU7 2136 aa21.47■■□□□ 1.03
VRK2-207ENST00000440705 HOXA2O43364 376 aa21.47■■□□□ 1.03
VRK2-207ENST00000440705 PALMO75781 387 aa21.47■■□□□ 1.03
VRK2-207ENST00000440705 FGFR1P11362 822 aa21.47■■□□□ 1.03
VRK2-207ENST00000440705 AARSP49588 968 aaKnown RBP eCLIP21.47■■□□□ 1.038e-6■■■■■ 52.4
VRK2-207ENST00000440705 HADHBP55084 474 aaKnown RBP21.47■■□□□ 1.03
VRK2-207ENST00000440705 C1QBPQ07021 282 aaKnown RBP21.47■■□□□ 1.03
VRK2-207ENST00000440705 DCLRE1AQ6PJP8 1040 aa21.47■■□□□ 1.03
VRK2-207ENST00000440705 DSTYKQ6XUX3 929 aa21.47■■□□□ 1.03
VRK2-207ENST00000440705 PDCL2Q8N4E4 241 aa21.47■■□□□ 1.03
VRK2-207ENST00000440705 TPCN2Q8NHX9 752 aa21.47■■□□□ 1.03
VRK2-207ENST00000440705 RSPH1Q8WYR4 309 aa21.47■■□□□ 1.03
VRK2-207ENST00000440705 ADAM22Q9P0K1 906 aa21.47■■□□□ 1.03
VRK2-207ENST00000440705 CTTNBP2NLQ9P2B4 639 aa21.47■■□□□ 1.03
VRK2-207ENST00000440705 UVRAGQ9P2Y5 699 aa21.47■■□□□ 1.03
VRK2-207ENST00000440705 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.47■■□□□ 1.03
VRK2-207ENST00000440705 KIAA0100Q14667 2235 aaKnown RBP21.46■■□□□ 1.03
VRK2-207ENST00000440705 FAM170AA1A519 330 aa21.46■■□□□ 1.03
VRK2-207ENST00000440705 B3GAT3O94766 335 aa21.46■■□□□ 1.03
VRK2-207ENST00000440705 LIN9Q5TKA1 542 aa21.46■■□□□ 1.03
VRK2-207ENST00000440705 CNKSR3Q6P9H4 555 aa21.46■■□□□ 1.03
VRK2-207ENST00000440705 MON1BQ7L1V2 547 aa21.46■■□□□ 1.03
VRK2-207ENST00000440705 ACOT1Q86TX2 421 aa21.46■■□□□ 1.03
VRK2-207ENST00000440705 SYCE1Q8N0S2 351 aa21.46■■□□□ 1.03
VRK2-207ENST00000440705 CRYBG2Q8N1P7 616 aa21.46■■□□□ 1.03
VRK2-207ENST00000440705 TNIP3Q96KP6 325 aa21.46■■□□□ 1.03
VRK2-207ENST00000440705 FAM193BQ96PV7 902 aaPredicted RBP21.46■■□□□ 1.03
VRK2-207ENST00000440705 PAAF1Q9BRP4 392 aa21.46■■□□□ 1.03
VRK2-207ENST00000440705 AVENQ9NQS1 362 aaPredicted RBP21.46■■□□□ 1.03
VRK2-207ENST00000440705 CNOT8Q9UFF9 292 aaKnown RBP21.46■■□□□ 1.03
VRK2-207ENST00000440705 STXBP5LQ9Y2K9 1186 aa21.46■■□□□ 1.03
VRK2-207ENST00000440705 GRID2IPA4D2P6 1211 aa21.45■■□□□ 1.02
VRK2-207ENST00000440705 O00370 1275 aa21.45■■□□□ 1.02
VRK2-207ENST00000440705 RNASELQ05823 741 aaKnown RBP21.45■■□□□ 1.02
VRK2-207ENST00000440705 DSC1Q08554 894 aa21.45■■□□□ 1.02
VRK2-207ENST00000440705 IKBKEQ14164 716 aa21.45■■□□□ 1.02
VRK2-207ENST00000440705 TCTN1Q2MV58 587 aa21.45■■□□□ 1.02
VRK2-207ENST00000440705 LCLAT1Q6UWP7 414 aa21.45■■□□□ 1.02
VRK2-207ENST00000440705 C3orf58Q8NDZ4 430 aa21.45■■□□□ 1.02
VRK2-207ENST00000440705 MCOLN1Q9GZU1 580 aa21.45■■□□□ 1.02
VRK2-207ENST00000440705 L2HGDHQ9H9P8 463 aa21.45■■□□□ 1.02
VRK2-207ENST00000440705 OSGEPQ9NPF4 335 aa21.45■■□□□ 1.02
VRK2-207ENST00000440705 TBC1D13Q9NVG8 400 aa21.45■■□□□ 1.02
VRK2-207ENST00000440705 TTC3P53804 2025 aa21.45■■□□□ 1.02
VRK2-207ENST00000440705 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.44■■□□□ 1.02
VRK2-207ENST00000440705 ARHGEF37A1IGU5 675 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 ENC1O14682 589 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 GABRDO14764 452 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 MTA2O94776 668 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 MICAL2O94851 1124 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 TIMP1P01033 207 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 MMP8P22894 467 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 LHX1P48742 406 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 PAPD7Q5XG87 772 aaKnown RBP21.44■■□□□ 1.02
VRK2-207ENST00000440705 WSCD1Q658N2 575 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 DENND1BQ6P3S1 775 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 C1orf131Q8NDD1 294 aaKnown RBP21.44■■□□□ 1.02
VRK2-207ENST00000440705 RABGGTAQ92696 567 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 KIAA0355O15063 1070 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 ATP1A1P05023 1023 aaKnown RBP21.44■■□□□ 1.02
VRK2-207ENST00000440705 CALB1P05937 261 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 PDGFRBP09619 1106 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 IGFBP6P24592 240 aaPredicted RBP21.44■■□□□ 1.02
VRK2-207ENST00000440705 ERICH1Q86X53 443 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 NPAS4Q8IUM7 802 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 CRIPAKQ8N1N5 446 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 WDTC1Q8N5D0 677 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 LRRC57Q8N9N7 239 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 SPATA18Q8TC71 538 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 C11orf70Q9BRQ4 267 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 NUP85Q9BW27 656 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 COG5Q9UP83 839 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 NME7Q9Y5B8 376 aa21.44■■□□□ 1.02
VRK2-207ENST00000440705 M0QYV0 167 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 DDHD2O94830 711 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 ODC1P11926 461 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 LMO2P25791 158 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 TIGD5Q53EQ6 642 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 ARHGAP17Q68EM7 881 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 MMS22LQ6ZRQ5 1243 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 SLFN11Q7Z7L1 901 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 DAAM2Q86T65 1068 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 ZNF280BQ86YH2 543 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 COLGALT2Q8IYK4 626 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 C12orf29Q8N999 325 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 MSANTD4Q8NCY6 345 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 CASD1Q96PB1 797 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 PRDM5Q9NQX1 630 aaPredicted RBP21.43■■□□□ 1.02
VRK2-207ENST00000440705 TSPAN16Q9UKR8 245 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 DSEQ9UL01 958 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 SAR1BQ9Y6B6 198 aa21.43■■□□□ 1.02
VRK2-207ENST00000440705 ATMINO43313 823 aaPredicted RBP21.42■■□□□ 1.02
VRK2-207ENST00000440705 RRM1P23921 792 aa21.42■■□□□ 1.02
VRK2-207ENST00000440705 PTP4A2Q12974 167 aa21.42■■□□□ 1.02
VRK2-207ENST00000440705 PPP1R26Q5T8A7 1209 aaPredicted RBP21.42■■□□□ 1.02
VRK2-207ENST00000440705 ZNF564Q8TBZ8 553 aaPredicted RBP21.42■■□□□ 1.02
VRK2-207ENST00000440705 MRPL9Q9BYD2 267 aaKnown RBP21.42■■□□□ 1.02
VRK2-207ENST00000440705 DPEP3Q9H4B8 488 aa21.42■■□□□ 1.02
VRK2-207ENST00000440705 MRPL47Q9HD33 250 aaKnown RBP21.42■■□□□ 1.02
VRK2-207ENST00000440705 CDC23Q9UJX2 597 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms