RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 C2orf15Q8WU43 125 aaKnown RBP14.34□□□□□ -0.11
EDEM1-202ENST00000434243 E2F7Q96AV8 911 aa14.34□□□□□ -0.11
EDEM1-202ENST00000434243 OSBPL6Q9BZF3 934 aa14.34□□□□□ -0.11
EDEM1-202ENST00000434243 BLZF1Q9H2G9 400 aa14.34□□□□□ -0.11
EDEM1-202ENST00000434243 DDX43Q9NXZ2 648 aaKnown RBP14.34□□□□□ -0.11
EDEM1-202ENST00000434243 HSPBP1Q9NZL4 362 aa14.34□□□□□ -0.11
EDEM1-202ENST00000434243 PCDHA7Q9UN72 937 aa14.34□□□□□ -0.11
EDEM1-202ENST00000434243 PCDHB5Q9Y5E4 795 aa14.34□□□□□ -0.11
EDEM1-202ENST00000434243 SNX9Q9Y5X1 595 aa14.34□□□□□ -0.11
EDEM1-202ENST00000434243 PRPF40AO75400 957 aaKnown RBP14.33□□□□□ -0.12
EDEM1-202ENST00000434243 TNNC2P02585 160 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 HAPLN1P10915 354 aaPredicted RBP14.33□□□□□ -0.12
EDEM1-202ENST00000434243 ATF6P18850 670 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 ACAT1P24752 427 aaKnown RBP14.33□□□□□ -0.12
EDEM1-202ENST00000434243 CASP1P29466 404 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 AFMP43652 599 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 CYP4F8P98187 520 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 MYL7Q01449 175 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 SURF1Q15526 300 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 SCARA3Q6AZY7 606 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 ZC3H14Q6PJT7 736 aaKnown RBP14.33□□□□□ -0.12
EDEM1-202ENST00000434243 GAREM2Q75VX8 874 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 CBWD2Q8IUF1 395 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 ADSSL1Q8N142 457 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 LRRC52Q8N7C0 313 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 FAM3CQ92520 227 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 C7orf25Q9BPX7 421 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 PI4K2AQ9BTU6 479 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 TRPV4Q9HBA0 871 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 CFAP45Q9UL16 551 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 L1RE1Q9UN81 338 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 MAGED2Q9UNF1 606 aaPredicted RBP14.33□□□□□ -0.12
EDEM1-202ENST00000434243 PIAS3Q9Y6X2 628 aa14.33□□□□□ -0.12
EDEM1-202ENST00000434243 PDCD11Q14690 1871 aaKnown RBP14.33□□□□□ -0.12
EDEM1-202ENST00000434243 NOTCH4Q99466 2003 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 TRIOO75962 3097 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 CLIC2O15247 247 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 EIF3DO15371 548 aaKnown RBP eCLIP14.32□□□□□ -0.12
EDEM1-202ENST00000434243 CDC25CP30307 473 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 MAGEA9P43362 315 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 CYP2J2P51589 502 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 KPNA1P52294 538 aaPredicted RBP14.32□□□□□ -0.12
EDEM1-202ENST00000434243 CSTF1Q05048 431 aaKnown RBP14.32□□□□□ -0.12
EDEM1-202ENST00000434243 DNM1Q05193 864 aaKnown RBP14.32□□□□□ -0.12
EDEM1-202ENST00000434243 MYO1EQ12965 1108 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 PKP1Q13835 747 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 NFE2Q16621 373 aaPredicted RBP14.32□□□□□ -0.12
EDEM1-202ENST00000434243 DUOXA2Q1HG44 320 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 UNC13DQ70J99 1090 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 CEP57L1Q8IYX8 460 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 TMEM86AQ8N2M4 240 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 TTC8Q8TAM2 541 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 RSPRY1Q96DX4 576 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 ACBD6Q9BR61 282 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 TASP1Q9H6P5 420 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 MAGEF1Q9HAY2 307 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 KIAA1586Q9HCI6 787 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 TMLHEQ9NVH6 421 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 INTS13Q9NVM9 706 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 SIX4Q9UIU6 781 aa14.32□□□□□ -0.12
EDEM1-202ENST00000434243 COL4A3Q01955 1670 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 LMNAP02545 664 aaKnown RBP14.31□□□□□ -0.12
EDEM1-202ENST00000434243 DLATP10515 647 aaKnown RBP14.31□□□□□ -0.12
EDEM1-202ENST00000434243 TNNI1P19237 187 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 CCNE1P24864 410 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 GPR15P49685 360 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 SDHAF4Q5VUM1 108 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 ATL3Q6DD88 541 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 ADGRF2Q8IZF7 708 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 OR5B17Q8NGF7 314 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 ZNF507Q8TCN5 953 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 HPDLQ96IR7 371 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 FNBP1Q96RU3 617 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 HINFPQ9BQA5 517 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 SEMA4AQ9H3S1 761 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 SLC39A2Q9NP94 309 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 TRPV5Q9NQA5 729 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 AGPAT3Q9NRZ7 376 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 GTF3C4Q9UKN8 822 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 NCANO14594 1321 aa14.31□□□□□ -0.12
EDEM1-202ENST00000434243 SLC38A8A6NNN8 435 aa14.3□□□□□ -0.12
EDEM1-202ENST00000434243 CHADO15335 359 aa14.3□□□□□ -0.12
EDEM1-202ENST00000434243 HCRTO43612 131 aa14.3□□□□□ -0.12
EDEM1-202ENST00000434243 CLSTN1O94985 981 aa14.3□□□□□ -0.12
EDEM1-202ENST00000434243 CYP2F1P24903 491 aa14.3□□□□□ -0.12
EDEM1-202ENST00000434243 PCSK1P29120 753 aa14.3□□□□□ -0.12
EDEM1-202ENST00000434243 HOXD13P35453 343 aa14.3□□□□□ -0.12
EDEM1-202ENST00000434243 LHX1P48742 406 aa14.3□□□□□ -0.12
EDEM1-202ENST00000434243 CUL4BQ13620 913 aa14.3□□□□□ -0.12
EDEM1-202ENST00000434243 DDR2Q16832 855 aa14.3□□□□□ -0.12
EDEM1-202ENST00000434243 INTS6LQ5JSJ4 861 aaKnown RBP14.3□□□□□ -0.12
EDEM1-202ENST00000434243 RESP18Q5W5W9 173 aa14.3□□□□□ -0.12
EDEM1-202ENST00000434243 CNNM4Q6P4Q7 775 aa14.3□□□□□ -0.12
EDEM1-202ENST00000434243 EPM2AIP1Q7L775 607 aaPredicted RBP14.3□□□□□ -0.12
EDEM1-202ENST00000434243 HS2ST1Q7LGA3 356 aa14.3□□□□□ -0.12
EDEM1-202ENST00000434243 OSTM1Q86WC4 334 aa14.3□□□□□ -0.12
EDEM1-202ENST00000434243 SPATA2LQ8IUW3 424 aaPredicted RBP14.3□□□□□ -0.12
EDEM1-202ENST00000434243 WDR49Q8IV35 697 aa14.3□□□□□ -0.12
EDEM1-202ENST00000434243 GRAMD1CQ8IYS0 662 aa14.3□□□□□ -0.12
EDEM1-202ENST00000434243 MAML2Q8IZL2 1156 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms