RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 RNF14Q9UBS8 474 aa7.69□□□□□ -1.18
LSM8-204ENST00000424702 CNOT8Q9UFF9 292 aaKnown RBP7.69□□□□□ -1.18
LSM8-204ENST00000424702 MTUS1Q9ULD2 1270 aa7.69□□□□□ -1.18
LSM8-204ENST00000424702 XYLBO75191 536 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 CALB1P05937 261 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 RB1P06400 928 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 TMEM253P0C7T8 217 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 RALAP11233 206 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 CSF2RAP15509 400 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 GLUD2P49448 558 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 FAM171A1Q5VUB5 890 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 ZNF365Q70YC5 407 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 TOP6BLQ8N6T0 577 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 ZSWIM2Q8NEG5 633 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 UBE2Q2Q8WVN8 375 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 ARFGAP3Q9NP61 516 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 ADAM22Q9P0K1 906 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 MRFAP1Q9Y605 127 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 ATP1A1P05023 1023 aaKnown RBP7.68□□□□□ -1.18
LSM8-204ENST00000424702 KCNE1P15382 129 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 TYMPP19971 482 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 TNFSF9P41273 254 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 MYL6P60660 151 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 CDR2Q01850 454 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 NAA35Q5VZE5 725 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 SPOPLQ6IQ16 392 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 C8orf74Q6P047 294 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 SLC39A4Q6P5W5 647 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 PASD1Q8IV76 773 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 GPR161Q8N6U8 529 aaKnown RBP7.68□□□□□ -1.18
LSM8-204ENST00000424702 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.68□□□□□ -1.18
LSM8-204ENST00000424702 TSC1Q92574 1164 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 USTQ9Y2C2 406 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 PCDHB5Q9Y5E4 795 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 SCINQ9Y6U3 715 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 KPNA7A9QM74 516 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 ENPP3O14638 875 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 VDRP11473 427 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 CYP11B1P15538 503 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 TUFMP49411 452 aaKnown RBP7.68□□□□□ -1.18
LSM8-204ENST00000424702 TIGD5Q53EQ6 642 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 TDRD10Q5VZ19 366 aaKnown RBP7.68□□□□□ -1.18
LSM8-204ENST00000424702 PPP2R2DQ66LE6 453 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 CCSAPQ6IQ19 270 aaPredicted RBP7.68□□□□□ -1.18
LSM8-204ENST00000424702 IRF2BP2Q7Z5L9 587 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 RABGGTAQ92696 567 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 BORCS6Q96GS4 357 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 SENP8Q96LD8 212 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 LMAN2LQ9H0V9 348 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 DONSONQ9NYP3 566 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 WDR35Q9P2L0 1181 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 STYXL1Q9Y6J8 313 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 DUSP10Q9Y6W6 482 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 SMIM28A0A1B0GU29 152 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 DPYSL4O14531 572 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 PMM2O15305 246 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 CHRNA1P02708 482 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 WEE2P0C1S8 567 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 MYBL1P10243 752 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 CTNNA2P26232 953 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 CXCR5P32302 372 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 EPHB3P54753 998 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 FAAP100Q0VG06 881 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 HLTFQ14527 1009 aaKnown RBP eCLIP7.68□□□□□ -1.18
LSM8-204ENST00000424702 ERICH1Q86X53 443 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 STKLD1Q8NE28 680 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 RIN2Q8WYP3 895 aaPredicted RBP7.68□□□□□ -1.18
LSM8-204ENST00000424702 KAT5Q92993 513 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 PBKQ96KB5 322 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 TGS1Q96RS0 853 aaKnown RBP7.68□□□□□ -1.18
LSM8-204ENST00000424702 SYT15Q9BQS2 421 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 STIM2Q9P246 746 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 PCDHB8Q9UN66 801 aa7.68□□□□□ -1.18
LSM8-204ENST00000424702 KIAA0100Q14667 2235 aaKnown RBP7.67□□□□□ -1.18
LSM8-204ENST00000424702 M0QYV0 167 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 ZBTB24O43167 697 aaPredicted RBP7.67□□□□□ -1.18
LSM8-204ENST00000424702 FGF19O95750 216 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 FAM200BP0CF97 657 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 GBP1P32455 592 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 ARHGAP25P42331 645 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 HADHQ16836 314 aaKnown RBP7.67□□□□□ -1.18
LSM8-204ENST00000424702 HGSNATQ68CP4 663 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 DNAJC24Q6P3W2 148 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 TAS1R3Q7RTX0 852 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 MRPL10Q7Z7H8 261 aaKnown RBP7.67□□□□□ -1.18
LSM8-204ENST00000424702 OR5B17Q8NGF7 314 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 CCDC26Q8TAB7 109 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 SEMA4DQ92854 862 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 LPPQ93052 612 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 DDX50Q9BQ39 737 aaKnown RBP7.67□□□□□ -1.18
LSM8-204ENST00000424702 C11orf70Q9BRQ4 267 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 ELOVL4Q9GZR5 314 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 SIX2Q9NPC8 291 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 UXTQ9UBK9 157 aaPredicted RBP7.67□□□□□ -1.18
LSM8-204ENST00000424702 STAP1Q9ULZ2 295 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 DDX3XO00571 662 aaKnown RBP eCLIP7.67□□□□□ -1.185e-28■■■■□ 20.5
LSM8-204ENST00000424702 PJA2O43164 708 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 NFICP08651 508 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 PAEPP09466 180 aa7.67□□□□□ -1.18
LSM8-204ENST00000424702 GZMAP12544 262 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms