RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 ZFYVE27Q5T4F4 411 aa16.76■□□□□ 0.27
HOXD3-202ENST00000410016 CGB2Q6NT52 195 aa16.76■□□□□ 0.27
HOXD3-202ENST00000410016 RIBC1Q8N443 379 aaPredicted RBP16.76■□□□□ 0.27
HOXD3-202ENST00000410016 TRPM4Q8TD43 1214 aa16.76■□□□□ 0.27
HOXD3-202ENST00000410016 SEPT1Q8WYJ6 367 aa16.76■□□□□ 0.27
HOXD3-202ENST00000410016 RGS17Q9UGC6 210 aaPredicted RBP16.76■□□□□ 0.27
HOXD3-202ENST00000410016 GGT7Q9UJ14 662 aa16.76■□□□□ 0.27
HOXD3-202ENST00000410016 LOC285556D6RIA3 1793 aa16.76■□□□□ 0.27
HOXD3-202ENST00000410016 ZBTB42B2RXF5 422 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 ITGAVP06756 1048 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 HOXC6P09630 235 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 SRGAP2CP0DJJ0 459 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 ASPAP45381 313 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 WDR4P57081 412 aaKnown RBP16.75■□□□□ 0.27
HOXD3-202ENST00000410016 TAP1Q03518 808 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 ADCY1Q08828 1119 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 LAMTOR4Q0VGL1 99 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 NEDD9Q14511 834 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 MORF4L2Q15014 288 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 RNASEH2BQ5TBB1 312 aaKnown RBP16.75■□□□□ 0.27
HOXD3-202ENST00000410016 IER5Q5VY09 327 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 TRABD2AQ86V40 505 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 ERICH1Q86X53 443 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 TDRPQ86YL5 185 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 ARFGAP1Q8N6T3 406 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.75■□□□□ 0.27
HOXD3-202ENST00000410016 TGS1Q96RS0 853 aaKnown RBP16.75■□□□□ 0.27
HOXD3-202ENST00000410016 ALOX15BO15296 676 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 TGFB3P10600 412 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 TAC1P20366 129 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 FOXN2P32314 431 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 STX2P32856 288 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 MKRN3Q13064 507 aaKnown RBP16.75■□□□□ 0.27
HOXD3-202ENST00000410016 CYP4A22Q5TCH4 519 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 FAM160B1Q5W0V3 765 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 METTL7BQ6UX53 244 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 SPATA21Q7Z572 469 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 RIOX2Q8IUF8 465 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 SLC35B2Q8TB61 432 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 MAGEC3Q8TD91 643 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 TMEM121Q9BTD3 319 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 PTPRHQ9HD43 1115 aa16.75■□□□□ 0.27
HOXD3-202ENST00000410016 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.75■□□□□ 0.27
HOXD3-202ENST00000410016 IGKV6-21A0A0C4DH24 114 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 LRRD1A4D1F6 860 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 PROZP22891 400 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 RFC1P35251 1148 aaPredicted RBP16.74■□□□□ 0.27
HOXD3-202ENST00000410016 LY6KQ17RY6 165 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 PPP1R21Q6ZMI0 780 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 KIAA0319LQ8IZA0 1049 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 RNF149Q8NC42 400 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 DENND1AQ8TEH3 1009 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 HAUS1Q96CS2 278 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 TTC25Q96NG3 672 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 DDX56Q9NY93 547 aaKnown RBP16.74■□□□□ 0.27
HOXD3-202ENST00000410016 NKIRAS1Q9NYS0 192 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 ARL2BPQ9Y2Y0 163 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 EXOC1LA0A1B0GW35 172 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 FAM47DPA6NHR8 397 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 PRKCBP05771 671 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 BNIP1Q12981 228 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 TMED2Q15363 201 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 MAPK6Q16659 721 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 HP1BP3Q5SSJ5 553 aaPredicted RBP16.74■□□□□ 0.27
HOXD3-202ENST00000410016 POTEAQ6S8J7 498 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 POLNQ7Z5Q5 900 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 CCDC63Q8NA47 563 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 CYTH4Q9UIA0 394 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 LTBP3Q9NS15 1303 aa16.74■□□□□ 0.27
HOXD3-202ENST00000410016 USP2O75604 605 aaPredicted RBP16.73■□□□□ 0.27
HOXD3-202ENST00000410016 ASMTLO95671 621 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 NCALDP61601 193 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 TFAMQ00059 246 aaKnown RBP16.73■□□□□ 0.27
HOXD3-202ENST00000410016 SLC25A11Q02978 314 aaKnown RBP16.73■□□□□ 0.27
HOXD3-202ENST00000410016 TRPC3Q13507 836 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 MXD4Q14582 209 aaPredicted RBP16.73■□□□□ 0.27
HOXD3-202ENST00000410016 MTFR1Q15390 333 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 SURF1Q15526 300 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 PTPN20Q4JDL3 420 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 DENND1BQ6P3S1 775 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 LRRC71Q8N4P6 559 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 FITM2Q8N6M3 262 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 R3HDMLQ9H3Y0 253 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 PCDH9Q9HC56 1237 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 GEMIN8Q9NWZ8 242 aaKnown RBP16.73■□□□□ 0.27
HOXD3-202ENST00000410016 GGA3Q9NZ52 723 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 TJP2Q9UDY2 1190 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 PPME1Q9Y570 386 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 SIGLEC16A6NMB1 481 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 ZBTB7AO95365 584 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 ARIH2O95376 493 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 IL1R2P27930 398 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 MGAT5Q09328 741 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 NR1H3Q13133 447 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 PRKG1Q13976 671 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 ZKSCAN8Q15776 578 aaPredicted RBP16.73■□□□□ 0.27
HOXD3-202ENST00000410016 SCARA5Q6ZMJ2 495 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 TSHZ1Q6ZSZ6 1077 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 EEPD1Q7L9B9 569 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 PRCCQ92733 491 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms