RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 FAM91A1Q658Y4 838 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 KYAT3Q6YP21 454 aaKnown RBP13.44□□□□□ -0.26
HERC3-203ENST00000407637 ALDH16A1Q8IZ83 802 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 MARVELD2Q8N4S9 558 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 POU5F2Q8N7G0 328 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 IKZF4Q9H2S9 585 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 TMOD2Q9NZR1 351 aa13.44□□□□□ -0.26
HERC3-203ENST00000407637 PSMC3IPQ9P2W1 217 aaPredicted RBP13.44□□□□□ -0.26
HERC3-203ENST00000407637 TRMT112Q9UI30 125 aaKnown RBP13.44□□□□□ -0.26
HERC3-203ENST00000407637 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 KLRF2D3W0D1 207 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 FOXN3O00409 490 aaPredicted RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 SPTLC1O15269 473 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 CDH2P19022 906 aaPredicted RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 VCPP55072 806 aaKnown RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 ZNF200P98182 395 aaPredicted RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 SNAPC2Q13487 334 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 CCNIQ14094 377 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 EFTUD2Q15029 972 aaKnown RBP eCLIP13.43□□□□□ -0.26
HERC3-203ENST00000407637 THOC7Q6I9Y2 204 aaKnown RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 PRPF39Q86UA1 669 aaKnown RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 PASD1Q8IV76 773 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 PPM1KQ8N3J5 372 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 ZCCHC9Q8N567 271 aaKnown RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 USP6NLQ92738 828 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 PRPF18Q99633 342 aaKnown RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 TCHPQ9BT92 498 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 VAT1LQ9HCJ6 419 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 DCP1AQ9NPI6 582 aaPredicted RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 SAP30BPQ9UHR5 308 aaKnown RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 TAGLN3Q9UI15 199 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 A0A088AWK7 358 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 CPA3P15088 417 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 BGNP21810 368 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 SERPINB6P35237 376 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 RFC4P35249 363 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 PDIA2Q13087 525 aaKnown RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 RC3H1Q5TC82 1133 aaKnown RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 IYDQ6PHW0 289 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 PACS1Q6VY07 963 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 CROCCP3Q8IVE0 287 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 CCDC124Q96CT7 223 aaKnown RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 CNBD2Q96M20 576 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 BTBD9Q96Q07 612 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 MXD3Q9BW11 206 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 NUP85Q9BW27 656 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 INTS2Q9H0H0 1204 aaKnown RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 TSC22D4Q9Y3Q8 395 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 FAM32AQ9Y421 112 aaKnown RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 CEPT1Q9Y6K0 416 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 NHSL1Q5SYE7 1610 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 ROBO3Q96MS0 1386 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 PDE8AO60658 829 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 STIP1P31948 543 aaKnown RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 MAN1A1P33908 653 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 MYBPC1Q00872 1141 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 HIC1Q14526 733 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 PRKD1Q15139 912 aaPredicted RBP13.43□□□□□ -0.26
HERC3-203ENST00000407637 CBWD6Q4V339 395 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 CBWD3Q5JTY5 395 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 CBWD5Q5RIA9 395 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 ERMNQ8TAM6 284 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 SNX27Q96L92 541 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 KCNQ5Q9NR82 932 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 BCS1LQ9Y276 419 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 INPP5FQ9Y2H2 1132 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 DTNAQ9Y4J8 743 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 FADS3Q9Y5Q0 445 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 AK5Q9Y6K8 562 aa13.43□□□□□ -0.26
HERC3-203ENST00000407637 SPATA31A1Q5TZJ5 1347 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 MATN2O00339 956 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 SLC16A3O15427 465 aaKnown RBP13.42□□□□□ -0.26
HERC3-203ENST00000407637 ADCY6O43306 1168 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 XPOTO43592 962 aaKnown RBP13.42□□□□□ -0.26
HERC3-203ENST00000407637 TGDSO95455 350 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 CD48P09326 243 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 RAG1P15918 1043 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 NAT1P18440 290 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 FMO5P49326 533 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 EPHB1P54762 984 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 RPL26P61254 145 aaKnown RBP13.42□□□□□ -0.26
HERC3-203ENST00000407637 ARHGAP4P98171 946 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 MECOMQ03112 1051 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 KCNA1Q09470 495 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 MORC4Q8TE76 937 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 PPP4R1Q8TF05 950 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 TTC17Q96AE7 1141 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 VPS11Q9H270 941 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 BCAS3Q9H6U6 928 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 PLGRKTQ9HBL7 147 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 PIK3CDO00329 1044 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 PDXKO00764 312 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 MARCH6O60337 910 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 TRIM49P0CI25 452 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 TRIM49CP0CI26 452 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 CA8P35219 290 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 SLC25A3Q00325 362 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 APOFQ13790 326 aa13.42□□□□□ -0.26
HERC3-203ENST00000407637 TGFBIQ15582 683 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms