RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 HSCBQ8IWL3 235 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 GPD1LQ8N335 351 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 LRRC52Q8N7C0 313 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 CXorf38Q8TB03 319 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 SPPL2BQ8TCT7 592 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 GIPC2Q8TF65 315 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 RSPRY1Q96DX4 576 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 MKNK1Q9BUB5 465 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 ABI2Q9NYB9 513 aaPredicted RBP15.33■□□□□ 0.04
NELFE-201ENST00000375425 ITGA11Q9UKX5 1188 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 CACNA1IQ9P0X4 2223 aa15.33■□□□□ 0.04
NELFE-201ENST00000375425 DCHS1Q96JQ0 3298 aa15.32■□□□□ 0.04
NELFE-201ENST00000375425 HUS1O60921 280 aa15.32■□□□□ 0.04
NELFE-201ENST00000375425 HAPLN1P10915 354 aaPredicted RBP15.32■□□□□ 0.04
NELFE-201ENST00000375425 HOXD13P35453 343 aa15.32■□□□□ 0.04
NELFE-201ENST00000375425 RPS9P46781 194 aaKnown RBP15.32■□□□□ 0.04
NELFE-201ENST00000375425 ASIC1P78348 528 aa15.32■□□□□ 0.04
NELFE-201ENST00000375425 RBP5P82980 135 aa15.32■□□□□ 0.04
NELFE-201ENST00000375425 CSTF1Q05048 431 aaKnown RBP15.32■□□□□ 0.04
NELFE-201ENST00000375425 TAF12Q16514 161 aa15.32■□□□□ 0.04
NELFE-201ENST00000375425 GPR158Q5T848 1215 aa15.32■□□□□ 0.04
NELFE-201ENST00000375425 ZC3H14Q6PJT7 736 aaKnown RBP15.32■□□□□ 0.04
NELFE-201ENST00000375425 YAF2Q8IY57 180 aa15.32■□□□□ 0.04
NELFE-201ENST00000375425 ZNF687Q8N1G0 1237 aa15.32■□□□□ 0.04
NELFE-201ENST00000375425 PDCL2Q8N4E4 241 aa15.32■□□□□ 0.04
NELFE-201ENST00000375425 C7orf25Q9BPX7 421 aa15.32■□□□□ 0.04
NELFE-201ENST00000375425 MTMR12Q9C0I1 747 aa15.32■□□□□ 0.04
NELFE-201ENST00000375425 TMLHEQ9NVH6 421 aa15.32■□□□□ 0.04
NELFE-201ENST00000375425 NDRG2Q9UN36 371 aaKnown RBP15.32■□□□□ 0.04
NELFE-201ENST00000375425 L1RE1Q9UN81 338 aa15.32■□□□□ 0.04
NELFE-201ENST00000375425 PIAS3Q9Y6X2 628 aa15.32■□□□□ 0.04
NELFE-201ENST00000375425 ZNF233A6NK53 670 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 ARNTLO00327 626 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 DPYSL4O14531 572 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 KIAA0391O15091 583 aaKnown RBP15.31■□□□□ 0.04
NELFE-201ENST00000375425 CHADO15335 359 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 POLR2DO15514 142 aaKnown RBP15.31■□□□□ 0.04
NELFE-201ENST00000375425 TMEM191BP0C7N4 346 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 TSPY1Q01534 308 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 FCHO2Q0JRZ9 810 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 BFSP1Q12934 665 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 ZNF528Q3MIS6 628 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 ARHGAP15Q53QZ3 475 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 LMBRD2Q68DH5 695 aaPredicted RBP15.31■□□□□ 0.04
NELFE-201ENST00000375425 CNNM4Q6P4Q7 775 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 CBWD2Q8IUF1 395 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 TMEM86AQ8N2M4 240 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 ZNF507Q8TCN5 953 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 FAM3CQ92520 227 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 LRRC3BQ96PB8 259 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 ACBD6Q9BR61 282 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 IL21Q9HBE4 155 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 GDAP2Q9NXN4 497 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 DDX43Q9NXZ2 648 aaKnown RBP15.31■□□□□ 0.04
NELFE-201ENST00000375425 SIX4Q9UIU6 781 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 FBXO4Q9UKT5 387 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 PCDHB5Q9Y5E4 795 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 SNX9Q9Y5X1 595 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 FAM186AA6NE01 2351 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 ANK1P16157 1881 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 DNAH14Q0VDD8 3507 aa15.31■□□□□ 0.04
NELFE-201ENST00000375425 EIF3DO15371 548 aaKnown RBP eCLIP15.3■□□□□ 0.04
NELFE-201ENST00000375425 F13A1P00488 732 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 ACAT1P24752 427 aaKnown RBP15.3■□□□□ 0.04
NELFE-201ENST00000375425 CCNE1P24864 410 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 CDC25CP30307 473 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 CYP4F8P98187 520 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 EPM2AIP1Q7L775 607 aaPredicted RBP15.3■□□□□ 0.04
NELFE-201ENST00000375425 RDH13Q8NBN7 331 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 SPRYD3Q8NCJ5 442 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 OR5B17Q8NGF7 314 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 CSGALNACT1Q8TDX6 532 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 ANKRD36BP1Q96IX9 119 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 GCNAQ96QF7 691 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 PI4K2AQ9BTU6 479 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 TASP1Q9H6P5 420 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 LMAN1LQ9HAT1 526 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 INTS13Q9NVM9 706 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 HSPBP1Q9NZL4 362 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 PCDHA7Q9UN72 937 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 R3HCC1Q9Y3T6 440 aaKnown RBP15.3■□□□□ 0.04
NELFE-201ENST00000375425 F5P12259 2224 aa15.3■□□□□ 0.04
NELFE-201ENST00000375425 PRPF40AO75400 957 aaKnown RBP15.29■□□□□ 0.04
NELFE-201ENST00000375425 CASP1P29466 404 aa15.29■□□□□ 0.04
NELFE-201ENST00000375425 ME1P48163 572 aa15.29■□□□□ 0.04
NELFE-201ENST00000375425 GPR15P49685 360 aa15.29■□□□□ 0.04
NELFE-201ENST00000375425 MYL7Q01449 175 aa15.29■□□□□ 0.04
NELFE-201ENST00000375425 MTAPQ13126 283 aa15.29■□□□□ 0.04
NELFE-201ENST00000375425 PKP1Q13835 747 aa15.29■□□□□ 0.04
NELFE-201ENST00000375425 SURF1Q15526 300 aa15.29■□□□□ 0.04
NELFE-201ENST00000375425 NFE2Q16621 373 aaPredicted RBP15.29■□□□□ 0.04
NELFE-201ENST00000375425 DUOXA2Q1HG44 320 aa15.29■□□□□ 0.04
NELFE-201ENST00000375425 FAM26FQ5R3K3 315 aa15.29■□□□□ 0.04
NELFE-201ENST00000375425 TOP6BLQ8N6T0 577 aa15.29■□□□□ 0.04
NELFE-201ENST00000375425 SLC46A2Q9BY10 475 aa15.29■□□□□ 0.04
NELFE-201ENST00000375425 BLZF1Q9H2G9 400 aa15.29■□□□□ 0.04
NELFE-201ENST00000375425 KIAA1586Q9HCI6 787 aa15.29■□□□□ 0.04
NELFE-201ENST00000375425 GTF3C4Q9UKN8 822 aa15.29■□□□□ 0.04
NELFE-201ENST00000375425 DMXL1Q9Y485 3027 aa15.28■□□□□ 0.04
NELFE-201ENST00000375425 PTPRJQ12913 1337 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms