RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 POLGP54098 1239 aaPredicted RBP18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 DNAJC3Q13217 504 aa18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 KPNB1Q14974 876 aaKnown RBP18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 RCN1Q15293 331 aa18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 KYNUQ16719 465 aa18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 XPNPEP1Q9NQW7 623 aa18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 KCND2Q9NZV8 630 aa18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 PIM2Q9P1W9 311 aa18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 PCDHA10Q9Y5I2 948 aa18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 A0A0A6YYK5 440 aaPredicted RBP18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 LYNP07948 512 aa18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 RTP1P59025 263 aa18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 NLRP11P59045 1033 aaKnown RBP18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 LIN52Q52LA3 116 aa18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 RFWD3Q6PCD5 774 aa18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 TAS1R3Q7RTX0 852 aa18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 SLC9A9Q8IVB4 645 aa18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 HELQQ8TDG4 1101 aa18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 RAB20Q9NX57 234 aa18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 NCANO14594 1321 aa18.23■□□□□ 0.51
LDLRAP1-201ENST00000374338 LRRIQ4A6NIV6 560 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 SPAG7O75391 227 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 ZNF189O75820 626 aaPredicted RBP18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 EIF4BP23588 611 aaKnown RBP18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 MARK3P27448 753 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 PRKCEQ02156 737 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 KRT39Q6A163 491 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 LRRC74BQ6ZQY2 392 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 C4orf50Q6ZRC1 276 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 SMC1BQ8NDV3 1235 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 ACSF2Q96CM8 615 aaPredicted RBP18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 MRRFQ96E11 262 aaKnown RBP18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 LRRC37BQ96QE4 947 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 POLR3FQ9H1D9 316 aaPredicted RBP18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 UMODL1Q5DID0 1318 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 CCDC97Q96F63 343 aaPredicted RBP18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 MTRF1LQ9UGC7 380 aaKnown RBP18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 USH1CQ9Y6N9 552 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 EDN1P05305 212 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 YARSP54577 528 aaKnown RBP18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 C4orf19Q8IY42 314 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 STKLD1Q8NE28 680 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 LZICQ8WZA0 190 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 PITPNM3Q9BZ71 974 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 ANAPC7Q9UJX3 599 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 CHMP2BQ9UQN3 213 aa18.22■□□□□ 0.51
LDLRAP1-201ENST00000374338 NCKAP1LP55160 1127 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 RFX8Q6ZV50 586 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 VSIG10LQ86VR7 867 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 FAM71AQ8IYT1 594 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 CFAP61Q8NHU2 1237 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 TRPM4Q8TD43 1214 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 GRAMD1AQ96CP6 724 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 ZBED3Q96IU2 234 aaPredicted RBP18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 PPP1R16BQ96T49 567 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 ZSWIM1Q9BR11 485 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 HAPLN2Q9GZV7 340 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 TMEM221A6NGB7 291 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 CAPN9O14815 690 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 KRT36O76013 467 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 ASLP04424 464 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 RRM1P23921 792 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 DRG2P55039 364 aaKnown RBP18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 BACE1P56817 501 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 ACTR2P61160 394 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 OSTNP61366 133 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 GSTA3Q16772 222 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 HP1BP3Q5SSJ5 553 aaPredicted RBP18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 ZBTB33Q86T24 672 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 FBXL13Q8NEE6 735 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 DTX3LQ8TDB6 740 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 MAGEB18Q96M61 343 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 TSPYL2Q9H2G4 693 aaPredicted RBP18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 AAASQ9NRG9 546 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 PCDHA3Q9Y5H8 950 aa18.21■□□□□ 0.51
LDLRAP1-201ENST00000374338 TAC1P20366 129 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 SLC34A1Q06495 639 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 NFIL3Q16649 462 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 WDR72Q3MJ13 1102 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 DALRD3Q5D0E6 543 aaKnown RBP18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 DSTYKQ6XUX3 929 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 KBTBD2Q8IY47 623 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 NT5C1BQ96P26 610 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 NR1H4Q96RI1 486 aaPredicted RBP18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 TARS2Q9BW92 718 aaKnown RBP18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 CIDEBQ9UHD4 219 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 RASAL2Q9UJF2 1139 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 TTC7AQ9ULT0 858 aaPredicted RBP18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 FAM187AA6NFU0 413 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 TRAFD1O14545 582 aaPredicted RBP18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 TBX10O75333 385 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 ITGA2BP08514 1039 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 RASSF2P50749 326 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 MFAP3P55082 362 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 MTM1Q13496 603 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 ZRSR2Q15696 482 aaKnown RBP18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 ZFYVE27Q5T4F4 411 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 LPAR1Q92633 364 aa18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 DDX27Q96GQ7 796 aaKnown RBP18.2■□□□□ 0.5
LDLRAP1-201ENST00000374338 TUBGCP5Q96RT8 1024 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms