RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 AGAP3Q96P47 875 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 INPP4AQ96PE3 977 aaPredicted RBP12.24□□□□□ -0.45
COPA-202ENST00000368069 DCLK3Q9C098 648 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 GGA3Q9NZ52 723 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 HACL1Q9UJ83 578 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 TRIM33Q9UPN9 1127 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 PCDHA3Q9Y5H8 950 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 TMEM121Q9BTD3 319 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 CXorf56Q9H5V9 222 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 ITGB3P05106 788 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 PDGFRBP09619 1106 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 OTUD4Q01804 1114 aaKnown RBP12.24□□□□□ -0.45
COPA-202ENST00000368069 POU5F1BQ06416 359 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 CUL3Q13618 768 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 FAXCQ5TGI0 409 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 SPOCD1Q6ZMY3 1216 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 ABI1Q8IZP0 508 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 MREGQ8N565 214 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 EIF1ADQ8N9N8 165 aaKnown RBP12.24□□□□□ -0.45
COPA-202ENST00000368069 FBXO36Q8NEA4 188 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 PDZD8Q8NEN9 1154 aa12.24□□□□□ -0.45
COPA-202ENST00000368069 MTO1Q9Y2Z2 717 aaKnown RBP12.24□□□□□ -0.45
COPA-202ENST00000368069 TRIM49D1C9J1S8 452 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 PSMD10O75832 226 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 PMLP29590 882 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 SLC12A1Q13621 1099 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 KIF22Q14807 665 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 C4orf50Q6ZRC1 276 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 IRF2BP2Q7Z5L9 587 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 MYLK4Q86YV6 388 aaPredicted RBP12.23□□□□□ -0.45
COPA-202ENST00000368069 CD302Q8IX05 232 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 PARD3BQ8TEW8 1205 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 PRPF31Q8WWY3 499 aaKnown RBP12.23□□□□□ -0.45
COPA-202ENST00000368069 SDCCAG3Q96C92 435 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 WDR18Q9BV38 432 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 PRMT7Q9NVM4 692 aaPredicted RBP12.23□□□□□ -0.45
COPA-202ENST00000368069 THEGQ9P2T0 379 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 ARHGEF37A1IGU5 675 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 BTNL10A8MVZ5 291 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 PPFIA2O75334 1257 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 S100BP04271 92 aaPredicted RBP12.23□□□□□ -0.45
COPA-202ENST00000368069 HIC1Q14526 733 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 TEX2Q8IWB9 1127 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 ABRAQ8N0Z2 381 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 ETNPPLQ8TBG4 499 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 HPDLQ96IR7 371 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 TNIP3Q96KP6 325 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 ACP6Q9NPH0 428 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 FAF1Q9UNN5 650 aaPredicted RBP12.23□□□□□ -0.45
COPA-202ENST00000368069 NAALADL1Q9UQQ1 740 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 PCDHAC2Q9Y5I4 1007 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 TRAPPC3O43617 180 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 SPATA31C1P0DKV0 1188 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 SERPINB9P50453 376 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 GOLGA7BQ2TAP0 167 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.23□□□□□ -0.45
COPA-202ENST00000368069 TTC39BQ5VTQ0 682 aaPredicted RBP12.23□□□□□ -0.45
COPA-202ENST00000368069 FAM111AQ96PZ2 611 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 SIK2Q9H0K1 926 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 UPF3AQ9H1J1 476 aaKnown RBP12.23□□□□□ -0.45
COPA-202ENST00000368069 DNAJC18Q9H819 358 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 USP20Q9Y2K6 914 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.23□□□□□ -0.45
COPA-202ENST00000368069 LOC102724159A0A0B4J2E5 919 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 MCL1Q07820 350 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 PWP2Q15269 919 aaKnown RBP12.23□□□□□ -0.45
COPA-202ENST00000368069 KCTD19Q17RG1 926 aaPredicted RBP12.23□□□□□ -0.45
COPA-202ENST00000368069 ARSHQ5FYA8 562 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 FOXR2Q6PJQ5 311 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 NDUFAF2Q8N183 169 aa12.23□□□□□ -0.45
COPA-202ENST00000368069 ANKRD63C9JTQ0 380 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 PPP1R11O60927 126 aaPredicted RBP12.22□□□□□ -0.45
COPA-202ENST00000368069 RPS6KA5O75582 802 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 MYL6P60660 151 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 MORF4L2Q15014 288 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 TRADDQ15628 312 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 KIF19Q2TAC6 998 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 APTXQ7Z2E3 356 aaKnown RBP12.22□□□□□ -0.45
COPA-202ENST00000368069 EPS8L1Q8TE68 723 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 HAO1Q9UJM8 370 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 PIN4Q9Y237 131 aaKnown RBP12.22□□□□□ -0.45
COPA-202ENST00000368069 BCL9LQ86UU0 1499 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 GOLGA8CPA6NN73 597 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 B2RBV5 119 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 TLR2O60603 784 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 MAP3K6O95382 1288 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 CPA2P48052 419 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 BACE1P56817 501 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 GCNT1Q02742 428 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 ITGB3BPQ13352 177 aaPredicted RBP12.22□□□□□ -0.45
COPA-202ENST00000368069 NLRP9Q7RTR0 991 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 SCN4BQ8IWT1 228 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 SAMD3Q8N6K7 520 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 CERKQ8TCT0 537 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 PGM2Q96G03 612 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 CISHQ9NSE2 258 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 LRRC4BQ9NT99 713 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 ANGPTL3Q9Y5C1 460 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 ROBO3Q96MS0 1386 aa12.22□□□□□ -0.45
COPA-202ENST00000368069 ADAMTS3O15072 1205 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms