RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 ARL5CA6NH57 179 aa12.83□□□□□ -0.35
USF1-203ENST00000368021 MEIS3P2A8K0S8 358 aa12.83□□□□□ -0.35
USF1-203ENST00000368021 GRXCR1A8MXD5 290 aa12.83□□□□□ -0.35
USF1-203ENST00000368021 TMCO5BA8MYB1 307 aa12.83□□□□□ -0.35
USF1-203ENST00000368021 SOX1O00570 391 aaPredicted RBP12.83□□□□□ -0.35
USF1-203ENST00000368021 MOCS3O95396 460 aa12.83□□□□□ -0.35
USF1-203ENST00000368021 CYP1A1P04798 512 aaPredicted RBP12.83□□□□□ -0.35
USF1-203ENST00000368021 THP07101 528 aa12.83□□□□□ -0.35
USF1-203ENST00000368021 RFC2P35250 354 aa12.83□□□□□ -0.35
USF1-203ENST00000368021 MLH1P40692 756 aa12.83□□□□□ -0.35
USF1-203ENST00000368021 CENPCQ03188 943 aa12.83□□□□□ -0.35
USF1-203ENST00000368021 FAM109BQ6ICB4 259 aaPredicted RBP12.83□□□□□ -0.35
USF1-203ENST00000368021 ACAD10Q6JQN1 1059 aa12.83□□□□□ -0.35
USF1-203ENST00000368021 SUGP1Q8IWZ8 645 aaKnown RBP12.83□□□□□ -0.35
USF1-203ENST00000368021 ZFP42Q96MM3 310 aa12.83□□□□□ -0.35
USF1-203ENST00000368021 RPS6KC1Q96S38 1066 aa12.83□□□□□ -0.35
USF1-203ENST00000368021 SDCBP2Q9H190 292 aa12.83□□□□□ -0.35
USF1-203ENST00000368021 GDAP2Q9NXN4 497 aa12.83□□□□□ -0.35
USF1-203ENST00000368021 PPEF2O14830 753 aa12.83□□□□□ -0.36
USF1-203ENST00000368021 INPPL1O15357 1258 aa12.83□□□□□ -0.36
USF1-203ENST00000368021 THAP12O43422 761 aa12.83□□□□□ -0.36
USF1-203ENST00000368021 LSM8O95777 96 aaKnown RBP12.83□□□□□ -0.36
USF1-203ENST00000368021 EOMESO95936 686 aa12.83□□□□□ -0.36
USF1-203ENST00000368021 RAD23BP54727 409 aa12.83□□□□□ -0.36
USF1-203ENST00000368021 HADHBP55084 474 aaKnown RBP12.83□□□□□ -0.36
USF1-203ENST00000368021 NAP1L1P55209 391 aaKnown RBP12.83□□□□□ -0.36
USF1-203ENST00000368021 CDH8P55286 799 aa12.83□□□□□ -0.36
USF1-203ENST00000368021 HNRNPH2P55795 449 aaKnown RBP12.83□□□□□ -0.36
USF1-203ENST00000368021 SOX4Q06945 474 aaPredicted RBP12.83□□□□□ -0.36
USF1-203ENST00000368021 TMCO2Q7Z6W1 182 aaPredicted RBP12.83□□□□□ -0.36
USF1-203ENST00000368021 ZNF598Q86UK7 904 aaKnown RBP12.83□□□□□ -0.36
USF1-203ENST00000368021 RHOT2Q8IXI1 618 aa12.83□□□□□ -0.36
USF1-203ENST00000368021 LRCH3Q96II8 777 aa12.83□□□□□ -0.36
USF1-203ENST00000368021 MMS19Q96T76 1030 aa12.83□□□□□ -0.36
USF1-203ENST00000368021 GAD1Q99259 594 aa12.83□□□□□ -0.36
USF1-203ENST00000368021 THAP2Q9H0W7 228 aa12.83□□□□□ -0.36
USF1-203ENST00000368021 TSPYL2Q9H2G4 693 aaPredicted RBP12.83□□□□□ -0.36
USF1-203ENST00000368021 RSAD1Q9HA92 442 aa12.83□□□□□ -0.36
USF1-203ENST00000368021 GTF3C4Q9UKN8 822 aa12.83□□□□□ -0.36
USF1-203ENST00000368021 PCDHGC3Q9UN70 934 aa12.83□□□□□ -0.36
USF1-203ENST00000368021 A0A1W2PPC1 479 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 C9IYK1 514 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 BUB1O43683 1085 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 URI1O94763 535 aaPredicted RBP12.82□□□□□ -0.36
USF1-203ENST00000368021 PARNO95453 639 aaKnown RBP12.82□□□□□ -0.36
USF1-203ENST00000368021 CXCL10P02778 98 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 PFKMP08237 780 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 ABCB4P21439 1286 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 RAP1GAPP47736 663 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 TAF6P49848 677 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 GPC5P78333 572 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 SV2CQ496J9 727 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 PAPD7Q5XG87 772 aaKnown RBP12.82□□□□□ -0.36
USF1-203ENST00000368021 SLC24A5Q71RS6 500 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 LIMS2Q7Z4I7 341 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 DNAAF5Q86Y56 855 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 ECHDC2Q86YB7 292 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 WHAMMQ8TF30 809 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 HERVK_113Q902F9 699 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 LPPQ93052 612 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 TRIM11Q96F44 468 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 ZNF518BQ9C0D4 1074 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.82□□□□□ -0.36
USF1-203ENST00000368021 KIAA1257Q9ULG3 409 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 SNX9Q9Y5X1 595 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 SLC4A7Q9Y6M7 1214 aa12.82□□□□□ -0.36
USF1-203ENST00000368021 KPNA7A9QM74 516 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 MED7O43513 233 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 CALCAP01258 141 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 FAM163BP0C2L3 166 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 MYBL1P10243 752 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 RPL9P32969 192 aaKnown RBP12.81□□□□□ -0.36
USF1-203ENST00000368021 CDH5P33151 784 aaPredicted RBP12.81□□□□□ -0.36
USF1-203ENST00000368021 NSFP46459 744 aaKnown RBP12.81□□□□□ -0.36
USF1-203ENST00000368021 LILRA4P59901 499 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 NOMO3P69849 1222 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 FAM189BP81408 668 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 AMPD2Q01433 879 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 IKBKEQ14164 716 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 ZNF394Q53GI3 561 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 PLEKHG4Q58EX7 1191 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 UNC93AQ86WB7 457 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 SLC4A11Q8NBS3 891 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 TPCN2Q8NHX9 752 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 SLC35G2Q8TBE7 412 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 CYFIP2Q96F07 1278 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 TMEM176AQ96HP8 235 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 VCPIP1Q96JH7 1222 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 NT5C1AQ9BXI3 368 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 GOLGA2P5Q9HBQ8 144 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 RNF19AQ9NV58 838 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 PUF60Q9UHX1 559 aaKnown RBP12.81□□□□□ -0.36
USF1-203ENST00000368021 MRFAP1Q9Y605 127 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 TANC1Q9C0D5 1861 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 MTA2O94776 668 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 CYP1A2P05177 515 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 IBSPP21815 317 aaPredicted RBP12.81□□□□□ -0.36
USF1-203ENST00000368021 SSR1P43307 286 aaKnown RBP12.81□□□□□ -0.36
USF1-203ENST00000368021 GRIK3Q13003 919 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 CNKSR3Q6P9H4 555 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms