RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 FANCGO15287 622 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 B3GAT3O94766 335 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 FGFR1P11362 822 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 FAM189BP81408 668 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 CENPCQ03188 943 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 TUSC3Q13454 348 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 FAM43BQ6ZT52 329 aaPredicted RBP18.42■□□□□ 0.54
CLDN4-201ENST00000340958 ADGRF2Q8IZF7 708 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 TOP6BLQ8N6T0 577 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 ARHGEF26Q96DR7 871 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 OSGEPQ9NPF4 335 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 ADAM22Q9P0K1 906 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 CNOT8Q9UFF9 292 aaKnown RBP18.42■□□□□ 0.54
CLDN4-201ENST00000340958 KIAA1257Q9ULG3 409 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 NCANO14594 1321 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 PDCD11Q14690 1871 aaKnown RBP18.42■□□□□ 0.54
CLDN4-201ENST00000340958 ATMINO43313 823 aaPredicted RBP18.42■□□□□ 0.54
CLDN4-201ENST00000340958 TIMP1P01033 207 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 PDGFRBP09619 1106 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 MYBL1P10243 752 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 GPNMBQ14956 572 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 NOMO2Q5JPE7 1267 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 DAAM2Q86T65 1068 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 ACOT1Q86TX2 421 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 UNC93AQ86WB7 457 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 C1orf131Q8NDD1 294 aaKnown RBP18.42■□□□□ 0.54
CLDN4-201ENST00000340958 UROC1Q96N76 676 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 C11orf70Q9BRQ4 267 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 WNT8AQ9H1J5 351 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 KANSL3Q9P2N6 904 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 PCDHGC3Q9UN70 934 aa18.42■□□□□ 0.54
CLDN4-201ENST00000340958 TANC1Q9C0D5 1861 aa18.41■□□□□ 0.54
CLDN4-201ENST00000340958 RIOK3O14730 519 aaKnown RBP18.41■□□□□ 0.54
CLDN4-201ENST00000340958 ATP1A1P05023 1023 aaKnown RBP18.41■□□□□ 0.54
CLDN4-201ENST00000340958 SCN1AP35498 2009 aa18.41■□□□□ 0.54
CLDN4-201ENST00000340958 NOMO3P69849 1222 aa18.41■□□□□ 0.54
CLDN4-201ENST00000340958 UPP1Q16831 310 aa18.41■□□□□ 0.54
CLDN4-201ENST00000340958 MCOLN2Q8IZK6 566 aa18.41■□□□□ 0.54
CLDN4-201ENST00000340958 SYCE1Q8N0S2 351 aa18.41■□□□□ 0.54
CLDN4-201ENST00000340958 SENP8Q96LD8 212 aa18.41■□□□□ 0.54
CLDN4-201ENST00000340958 ZNF518BQ9C0D4 1074 aa18.41■□□□□ 0.54
CLDN4-201ENST00000340958 GTF3C4Q9UKN8 822 aa18.41■□□□□ 0.54
CLDN4-201ENST00000340958 L1RE1Q9UN81 338 aa18.41■□□□□ 0.54
CLDN4-201ENST00000340958 M0QYV0 167 aa18.4■□□□□ 0.54
CLDN4-201ENST00000340958 FTCDO95954 541 aa18.4■□□□□ 0.54
CLDN4-201ENST00000340958 DENND1BQ6P3S1 775 aa18.4■□□□□ 0.54
CLDN4-201ENST00000340958 MMS22LQ6ZRQ5 1243 aa18.4■□□□□ 0.54
CLDN4-201ENST00000340958 PHLDB2Q86SQ0 1253 aa18.4■□□□□ 0.54
CLDN4-201ENST00000340958 TPCN2Q8NHX9 752 aa18.4■□□□□ 0.54
CLDN4-201ENST00000340958 CALR3Q96L12 384 aaKnown RBP18.4■□□□□ 0.54
CLDN4-201ENST00000340958 ZSWIM1Q9BR11 485 aa18.4■□□□□ 0.54
CLDN4-201ENST00000340958 NUP85Q9BW27 656 aa18.4■□□□□ 0.54
CLDN4-201ENST00000340958 ELAC1Q9H777 363 aaKnown RBP18.4■□□□□ 0.54
CLDN4-201ENST00000340958 SYNCQ9H7C4 482 aa18.4■□□□□ 0.54
CLDN4-201ENST00000340958 RNF216Q9NWF9 866 aaPredicted RBP18.4■□□□□ 0.54
CLDN4-201ENST00000340958 CHORDC1Q9UHD1 332 aaPredicted RBP18.4■□□□□ 0.54
CLDN4-201ENST00000340958 PCDHGC5Q9Y5F6 944 aa18.4■□□□□ 0.54
CLDN4-201ENST00000340958 SCN5AQ14524 2016 aa18.4■□□□□ 0.54
CLDN4-201ENST00000340958 GRID2IPA4D2P6 1211 aa18.39■□□□□ 0.54
CLDN4-201ENST00000340958 STILQ15468 1287 aa18.39■□□□□ 0.54
CLDN4-201ENST00000340958 CNGA2Q16280 664 aa18.39■□□□□ 0.54
CLDN4-201ENST00000340958 PAN2Q504Q3 1202 aaKnown RBP18.39■□□□□ 0.54
CLDN4-201ENST00000340958 CLLU1OSQ5K130 101 aa18.39■□□□□ 0.54
CLDN4-201ENST00000340958 ERICH1Q86X53 443 aa18.39■□□□□ 0.54
CLDN4-201ENST00000340958 PDCL2Q8N4E4 241 aa18.39■□□□□ 0.54
CLDN4-201ENST00000340958 MSANTD4Q8NCY6 345 aa18.39■□□□□ 0.54
CLDN4-201ENST00000340958 PAAF1Q9BRP4 392 aa18.39■□□□□ 0.54
CLDN4-201ENST00000340958 UBE2OQ9C0C9 1292 aaKnown RBP18.39■□□□□ 0.54
CLDN4-201ENST00000340958 FAM49BQ9NUQ9 324 aa18.39■□□□□ 0.54
CLDN4-201ENST00000340958 HESX1Q9UBX0 185 aa18.39■□□□□ 0.54
CLDN4-201ENST00000340958 SAR1BQ9Y6B6 198 aa18.39■□□□□ 0.54
CLDN4-201ENST00000340958 MICAL2O94851 1124 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 CXCL10P02778 98 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 CYP1A2P05177 515 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 CALB1P05937 261 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 BMP8BP34820 402 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 DNA2P51530 1060 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 IKBKEQ14164 716 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 C2CD6Q53TS8 623 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 WSCD1Q658N2 575 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 MFSD5Q6N075 450 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 PHF13Q86YI8 300 aaPredicted RBP18.39■□□□□ 0.53
CLDN4-201ENST00000340958 C12orf29Q8N999 325 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 HASPINQ8TF76 798 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 KBTBD7Q8WVZ9 684 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 TNIP3Q96KP6 325 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 LHX5Q9H2C1 402 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 UVRAGQ9P2Y5 699 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.39■□□□□ 0.53
CLDN4-201ENST00000340958 STXBP5LQ9Y2K9 1186 aa18.39■□□□□ 0.53
CLDN4-201ENST00000340958 TMEM110-MUSTN1A8MSY1 372 aa18.38■□□□□ 0.53
CLDN4-201ENST00000340958 HOXA2O43364 376 aa18.38■□□□□ 0.53
CLDN4-201ENST00000340958 WARSP23381 471 aaKnown RBP18.38■□□□□ 0.53
CLDN4-201ENST00000340958 RRM1P23921 792 aa18.38■□□□□ 0.53
CLDN4-201ENST00000340958 OR1G1P47890 313 aa18.38■□□□□ 0.53
CLDN4-201ENST00000340958 C1QBPQ07021 282 aaKnown RBP18.38■□□□□ 0.53
CLDN4-201ENST00000340958 TUBB2AQ13885 445 aa18.38■□□□□ 0.53
CLDN4-201ENST00000340958 GOLGA7BQ2TAP0 167 aa18.38■□□□□ 0.53
CLDN4-201ENST00000340958 MON1BQ7L1V2 547 aa18.38■□□□□ 0.53
CLDN4-201ENST00000340958 PEX26Q7Z412 305 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms