RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 NCDNQ9UBB6 729 aa20.95■□□□□ 0.94
ITGA4-202ENST00000339307 PCDHGA2Q9Y5H1 932 aa20.95■□□□□ 0.94
ITGA4-202ENST00000339307 CHADO15335 359 aa20.94■□□□□ 0.94
ITGA4-202ENST00000339307 HUS1O60921 280 aa20.94■□□□□ 0.94
ITGA4-202ENST00000339307 ATF6P18850 670 aa20.94■□□□□ 0.94
ITGA4-202ENST00000339307 CDC25CP30307 473 aa20.94■□□□□ 0.94
ITGA4-202ENST00000339307 SOX9P48436 509 aa20.94■□□□□ 0.94
ITGA4-202ENST00000339307 WNT7BP56706 349 aa20.94■□□□□ 0.94
ITGA4-202ENST00000339307 PPP2R5DQ14738 602 aa20.94■□□□□ 0.94
ITGA4-202ENST00000339307 BRSK2Q8IWQ3 736 aa20.94■□□□□ 0.94
ITGA4-202ENST00000339307 C2orf15Q8WU43 125 aaKnown RBP20.94■□□□□ 0.94
ITGA4-202ENST00000339307 CBWD1Q9BRT8 395 aa20.94■□□□□ 0.94
ITGA4-202ENST00000339307 PI4K2AQ9BTU6 479 aa20.94■□□□□ 0.94
ITGA4-202ENST00000339307 FGFBP2Q9BYJ0 223 aa20.94■□□□□ 0.94
ITGA4-202ENST00000339307 TMEM206Q9H813 350 aa20.94■□□□□ 0.94
ITGA4-202ENST00000339307 TFIP11Q9UBB9 837 aaKnown RBP20.94■□□□□ 0.94
ITGA4-202ENST00000339307 MAGED2Q9UNF1 606 aaPredicted RBP20.94■□□□□ 0.94
ITGA4-202ENST00000339307 PCDHB5Q9Y5E4 795 aa20.94■□□□□ 0.94
ITGA4-202ENST00000339307 TSC2P49815 1807 aa20.93■□□□□ 0.94
ITGA4-202ENST00000339307 PATJQ8NI35 1801 aa20.93■□□□□ 0.94
ITGA4-202ENST00000339307 EXTL3O43909 919 aa20.93■□□□□ 0.94
ITGA4-202ENST00000339307 PRPF40AO75400 957 aaKnown RBP20.93■□□□□ 0.94
ITGA4-202ENST00000339307 TMEM191BP0C7N4 346 aa20.93■□□□□ 0.94
ITGA4-202ENST00000339307 HAPLN1P10915 354 aaPredicted RBP20.93■□□□□ 0.94
ITGA4-202ENST00000339307 GARTP22102 1010 aa20.93■□□□□ 0.94
ITGA4-202ENST00000339307 SMARCB1Q12824 385 aa20.93■□□□□ 0.94
ITGA4-202ENST00000339307 STXBP4Q6ZWJ1 553 aa20.93■□□□□ 0.94
ITGA4-202ENST00000339307 BORCS6Q96GS4 357 aa20.93■□□□□ 0.94
ITGA4-202ENST00000339307 FAM84AQ96KN4 292 aa20.93■□□□□ 0.94
ITGA4-202ENST00000339307 SMG9Q9H0W8 520 aaKnown RBP20.93■□□□□ 0.94
ITGA4-202ENST00000339307 TASP1Q9H6P5 420 aa20.93■□□□□ 0.94
ITGA4-202ENST00000339307 PDE11AQ9HCR9 933 aa20.93■□□□□ 0.94
ITGA4-202ENST00000339307 ACAT1P24752 427 aaKnown RBP20.92■□□□□ 0.94
ITGA4-202ENST00000339307 FOXD4L6Q3SYB3 417 aaPredicted RBP20.92■□□□□ 0.94
ITGA4-202ENST00000339307 FOXD4L3Q6VB84 417 aaPredicted RBP20.92■□□□□ 0.94
ITGA4-202ENST00000339307 PDCL2Q8N4E4 241 aa20.92■□□□□ 0.94
ITGA4-202ENST00000339307 C1orf127Q8N9H9 656 aa20.92■□□□□ 0.94
ITGA4-202ENST00000339307 SUMF1Q8NBK3 374 aa20.92■□□□□ 0.94
ITGA4-202ENST00000339307 ZNF396Q96N95 335 aaPredicted RBP20.92■□□□□ 0.94
ITGA4-202ENST00000339307 LRRC27Q9C0I9 530 aa20.92■□□□□ 0.94
ITGA4-202ENST00000339307 CHRDQ9H2X0 955 aa20.92■□□□□ 0.94
ITGA4-202ENST00000339307 C8orf33Q9H7E9 229 aaPredicted RBP20.92■□□□□ 0.94
ITGA4-202ENST00000339307 THG1LQ9NWX6 298 aaKnown RBP20.92■□□□□ 0.94
ITGA4-202ENST00000339307 DDX43Q9NXZ2 648 aaKnown RBP20.92■□□□□ 0.94
ITGA4-202ENST00000339307 GTSE1Q9NYZ3 720 aa20.92■□□□□ 0.94
ITGA4-202ENST00000339307 SNX9Q9Y5X1 595 aa20.92■□□□□ 0.94
ITGA4-202ENST00000339307 SPTLC2O15270 562 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 GPR15P49685 360 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 RBP5P82980 135 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 MYL7Q01449 175 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 FCHO2Q0JRZ9 810 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 ARHGAP29Q52LW3 1261 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 LMBRD2Q68DH5 695 aaPredicted RBP20.91■□□□□ 0.94
ITGA4-202ENST00000339307 GPD1LQ8N335 351 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 STKLD1Q8NE28 680 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 TTC16Q8NEE8 873 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 BPIFB1Q8TDL5 484 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 SECISBP2LQ93073 1101 aaKnown RBP20.91■□□□□ 0.94
ITGA4-202ENST00000339307 HPS3Q969F9 1004 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 DHX58Q96C10 678 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 LRRC3BQ96PB8 259 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 MKNK1Q9BUB5 465 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 MTMR12Q9C0I1 747 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 RBM12Q9NTZ6 932 aaKnown RBP20.91■□□□□ 0.94
ITGA4-202ENST00000339307 TMLHEQ9NVH6 421 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 ITGA11Q9UKX5 1188 aa20.91■□□□□ 0.94
ITGA4-202ENST00000339307 FRMD3A2A2Y4 597 aa20.9■□□□□ 0.94
ITGA4-202ENST00000339307 ARNTLO00327 626 aa20.9■□□□□ 0.94
ITGA4-202ENST00000339307 PRAMEF12O95522 483 aa20.9■□□□□ 0.94
ITGA4-202ENST00000339307 HSP90AA1P07900 732 aaKnown RBP20.9■□□□□ 0.94
ITGA4-202ENST00000339307 NASPP49321 788 aaPredicted RBP20.9■□□□□ 0.94
ITGA4-202ENST00000339307 CCR3P51677 355 aa20.9■□□□□ 0.94
ITGA4-202ENST00000339307 LRRC32Q14392 662 aa20.9■□□□□ 0.94
ITGA4-202ENST00000339307 SDHAF4Q5VUM1 108 aa20.9■□□□□ 0.94
ITGA4-202ENST00000339307 ZNF687Q8N1G0 1237 aa20.9■□□□□ 0.94
ITGA4-202ENST00000339307 MAB21L3Q8N8X9 362 aa20.9■□□□□ 0.94
ITGA4-202ENST00000339307 LINC00301Q8NCQ3 95 aa20.9■□□□□ 0.94
ITGA4-202ENST00000339307 ANKRD36BP1Q96IX9 119 aa20.9■□□□□ 0.94
ITGA4-202ENST00000339307 SLC46A2Q9BY10 475 aa20.9■□□□□ 0.94
ITGA4-202ENST00000339307 PRMT8Q9NR22 394 aaPredicted RBP20.9■□□□□ 0.94
ITGA4-202ENST00000339307 L1RE1Q9UN81 338 aa20.9■□□□□ 0.94
ITGA4-202ENST00000339307 FANCMQ8IYD8 2048 aa20.89■□□□□ 0.94
ITGA4-202ENST00000339307 SPECC1L-ADORA2AF8WAN1 911 aa20.89■□□□□ 0.94
ITGA4-202ENST00000339307 CHRNB1P11230 501 aa20.89■□□□□ 0.94
ITGA4-202ENST00000339307 AVPR1AP37288 418 aa20.89■□□□□ 0.94
ITGA4-202ENST00000339307 CXCL12P48061 93 aa20.89■□□□□ 0.94
ITGA4-202ENST00000339307 NRLP54845 237 aa20.89■□□□□ 0.94
ITGA4-202ENST00000339307 ASIC1P78348 528 aa20.89■□□□□ 0.94
ITGA4-202ENST00000339307 AMPD3Q01432 767 aa20.89■□□□□ 0.94
ITGA4-202ENST00000339307 TNK2Q07912 1038 aa20.89■□□□□ 0.94
ITGA4-202ENST00000339307 NFE2Q16621 373 aaPredicted RBP20.89■□□□□ 0.94
ITGA4-202ENST00000339307 SCARA3Q6AZY7 606 aa20.89■□□□□ 0.94
ITGA4-202ENST00000339307 C1orf228Q6PIY5 440 aa20.89■□□□□ 0.94
ITGA4-202ENST00000339307 ZBTB44Q8NCP5 570 aa20.89■□□□□ 0.94
ITGA4-202ENST00000339307 MSANTD3Q96H12 275 aa20.89■□□□□ 0.94
ITGA4-202ENST00000339307 TNMDQ9H2S6 317 aa20.89■□□□□ 0.94
ITGA4-202ENST00000339307 IL21Q9HBE4 155 aa20.89■□□□□ 0.94
ITGA4-202ENST00000339307 OBP2AQ9NY56 170 aa20.89■□□□□ 0.94
ITGA4-202ENST00000339307 SMG5Q9UPR3 1016 aaKnown RBP20.89■□□□□ 0.94
ITGA4-202ENST00000339307 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms