RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 CFAP54Q96N23 3096 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 PRR23AA6NEV1 266 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 MAN2B1O00754 1011 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 TGFB1I1O43294 461 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 HUS1O60921 280 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 TMEM191BP0C7N4 346 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 VIPR2P41587 438 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 RPS9P46781 194 aaKnown RBP19.09■□□□□ 0.65
HDDC3-201ENST00000330334 TSPY1Q01534 308 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 PKP1Q13835 747 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 DUOXA2Q1HG44 320 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 MGAT5BQ3V5L5 792 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 TPRG1Q6ZUI0 275 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 LIMS2Q7Z4I7 341 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 NKD2Q969F2 451 aaPredicted RBP19.09■□□□□ 0.65
HDDC3-201ENST00000330334 ANKRD36BP1Q96IX9 119 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 SEPT5Q99719 369 aaPredicted RBP19.09■□□□□ 0.65
HDDC3-201ENST00000330334 MKNK1Q9BUB5 465 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 SLITRK6Q9H5Y7 841 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 ZNF334Q9HCZ1 680 aaPredicted RBP19.09■□□□□ 0.65
HDDC3-201ENST00000330334 ABCB6Q9NP58 842 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 HEBP1Q9NRV9 189 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 OBP2AQ9NY56 170 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 HSPBP1Q9NZL4 362 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 MTF2Q9Y483 593 aaPredicted RBP19.09■□□□□ 0.65
HDDC3-201ENST00000330334 PCDHB5Q9Y5E4 795 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 WDR87Q6ZQQ6 2873 aa19.09■□□□□ 0.65
HDDC3-201ENST00000330334 F5P12259 2224 aa19.08■□□□□ 0.65
HDDC3-201ENST00000330334 SHISA7A6NL88 538 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 HEPACAM2A8MVW5 462 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 GABRDO14764 452 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 ZNF263O14978 683 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 SOAT2O75908 522 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 ATF6P18850 670 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 LHX1P48742 406 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 DNM1Q05193 864 aaKnown RBP19.08■□□□□ 0.64
HDDC3-201ENST00000330334 FCHO2Q0JRZ9 810 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 MYO1EQ12965 1108 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 GRM2Q14416 872 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 UBXN2BQ14CS0 331 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 BMT2Q1RMZ1 405 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 FOXD4L6Q3SYB3 417 aaPredicted RBP19.08■□□□□ 0.64
HDDC3-201ENST00000330334 ARHGAP15Q53QZ3 475 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 FOXD4L3Q6VB84 417 aaPredicted RBP19.08■□□□□ 0.64
HDDC3-201ENST00000330334 ASCL5Q7RTU5 278 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 CBWD2Q8IUF1 395 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 WDR49Q8IV35 697 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 SCFD1Q8WVM8 642 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 MTMR12Q9C0I1 747 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 ATXN3LQ9H3M9 355 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 AGPAT3Q9NRZ7 376 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 L1RE1Q9UN81 338 aa19.08■□□□□ 0.64
HDDC3-201ENST00000330334 TSC2P49815 1807 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 SOBPA7XYQ1 873 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 ARNTLO00327 626 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 CHADO15335 359 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 LRRN2O75325 713 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 TNNC2P02585 160 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 SLFN14P0C7P3 912 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 GABRR2P28476 465 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 CDC25CP30307 473 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 GDI1P31150 447 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 MYL7Q01449 175 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 FZD5Q13467 585 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 MAMSTRQ6ZN01 415 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 ARID3BQ8IVW6 561 aaPredicted RBP19.07■□□□□ 0.64
HDDC3-201ENST00000330334 C12orf56Q8IXR9 622 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 ZNF687Q8N1G0 1237 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 FAM200AQ8TCP9 573 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 TASP1Q9H6P5 420 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 IL21Q9HBE4 155 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 DDX43Q9NXZ2 648 aaKnown RBP19.07■□□□□ 0.64
HDDC3-201ENST00000330334 FBXO4Q9UKT5 387 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 R3HCC1Q9Y3T6 440 aaKnown RBP19.07■□□□□ 0.64
HDDC3-201ENST00000330334 SNX9Q9Y5X1 595 aa19.07■□□□□ 0.64
HDDC3-201ENST00000330334 FAM186AA6NE01 2351 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 PRPF40AO75400 957 aaKnown RBP19.06■□□□□ 0.64
HDDC3-201ENST00000330334 KRT19P08727 400 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 FAM163BP0C2L3 166 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 SP9P0CG40 484 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 CD72P21854 359 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 TARSP26639 723 aaKnown RBP19.06■□□□□ 0.64
HDDC3-201ENST00000330334 PCSK1P29120 753 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 BFSP1Q12934 665 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 TAF12Q16514 161 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 SNRNP35Q16560 246 aaKnown RBP19.06■□□□□ 0.64
HDDC3-201ENST00000330334 SOWAHAQ2M3V2 549 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 ZNF528Q3MIS6 628 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 SCARA3Q6AZY7 606 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 C1orf228Q6PIY5 440 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 HS2ST1Q7LGA3 356 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 MAML2Q8IZL2 1156 aaPredicted RBP19.06■□□□□ 0.64
HDDC3-201ENST00000330334 OR5B17Q8NGF7 314 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 NOC3LQ8WTT2 800 aaKnown RBP19.06■□□□□ 0.64
HDDC3-201ENST00000330334 TMEM174Q8WUU8 243 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 MSANTD3Q96H12 275 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 HPDLQ96IR7 371 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 PKMYT1Q99640 499 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 LPIN3Q9BQK8 851 aa19.06■□□□□ 0.64
HDDC3-201ENST00000330334 TMLHEQ9NVH6 421 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms