RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 ANKRD13AQ8IZ07 590 aa26.46■■□□□ 1.83
ROM1-201ENST00000278833 FNIP1Q8TF40 1166 aa26.46■■□□□ 1.83
ROM1-201ENST00000278833 CFAP57Q96MR6 1250 aa26.46■■□□□ 1.83
ROM1-201ENST00000278833 LHX5Q9H2C1 402 aa26.46■■□□□ 1.83
ROM1-201ENST00000278833 UBN1Q9NPG3 1134 aa26.46■■□□□ 1.83
ROM1-201ENST00000278833 USTQ9Y2C2 406 aa26.46■■□□□ 1.83
ROM1-201ENST00000278833 PRKCBP05771 671 aa26.45■■□□□ 1.83
ROM1-201ENST00000278833 ITGAVP06756 1048 aa26.45■■□□□ 1.83
ROM1-201ENST00000278833 HOXC6P09630 235 aa26.45■■□□□ 1.83
ROM1-201ENST00000278833 TCF7P36402 384 aaPredicted RBP26.45■■□□□ 1.83
ROM1-201ENST00000278833 VCPP55072 806 aaKnown RBP26.45■■□□□ 1.83
ROM1-201ENST00000278833 CCDC38Q502W7 563 aa26.45■■□□□ 1.83
ROM1-201ENST00000278833 MFSD7Q6UXD7 560 aa26.45■■□□□ 1.83
ROM1-201ENST00000278833 PLPPR4Q7Z2D5 763 aa26.45■■□□□ 1.83
ROM1-201ENST00000278833 MTMR12Q9C0I1 747 aa26.45■■□□□ 1.83
ROM1-201ENST00000278833 PTPRHQ9HD43 1115 aa26.45■■□□□ 1.83
ROM1-201ENST00000278833 BTBD7Q9P203 1132 aa26.45■■□□□ 1.83
ROM1-201ENST00000278833 SHOC2Q9UQ13 582 aa26.45■■□□□ 1.83
ROM1-201ENST00000278833 VIMP08670 466 aaKnown RBP26.45■■□□□ 1.82
ROM1-201ENST00000278833 MAGEA4P43358 317 aa26.45■■□□□ 1.82
ROM1-201ENST00000278833 MYL6P60660 151 aa26.45■■□□□ 1.82
ROM1-201ENST00000278833 PPARDQ03181 441 aa26.45■■□□□ 1.82
ROM1-201ENST00000278833 VGLL4Q14135 290 aa26.45■■□□□ 1.82
ROM1-201ENST00000278833 MAPK6Q16659 721 aa26.45■■□□□ 1.82
ROM1-201ENST00000278833 TFDP3Q5H9I0 405 aa26.45■■□□□ 1.82
ROM1-201ENST00000278833 TSHZ1Q6ZSZ6 1077 aa26.45■■□□□ 1.82
ROM1-201ENST00000278833 XYLT2Q9H1B5 865 aa26.45■■□□□ 1.82
ROM1-201ENST00000278833 PCDH9Q9HC56 1237 aa26.45■■□□□ 1.82
ROM1-201ENST00000278833 KLC4Q9NSK0 619 aa26.45■■□□□ 1.82
ROM1-201ENST00000278833 CEP83Q9Y592 693 aa26.45■■□□□ 1.82
ROM1-201ENST00000278833 IRF6O14896 467 aa26.44■■□□□ 1.82
ROM1-201ENST00000278833 LAMTOR4Q0VGL1 99 aa26.44■■□□□ 1.82
ROM1-201ENST00000278833 MKRN4PQ13434 485 aaPredicted RBP26.44■■□□□ 1.82
ROM1-201ENST00000278833 TAZQ16635 292 aa26.44■■□□□ 1.82
ROM1-201ENST00000278833 P3H1Q32P28 736 aa26.44■■□□□ 1.82
ROM1-201ENST00000278833 PPP1R21Q6ZMI0 780 aa26.44■■□□□ 1.82
ROM1-201ENST00000278833 SGSM3Q96HU1 749 aa26.44■■□□□ 1.82
ROM1-201ENST00000278833 MCEEQ96PE7 176 aa26.44■■□□□ 1.82
ROM1-201ENST00000278833 RBM15Q96T37 977 aaKnown RBP eCLIP26.44■■□□□ 1.82
ROM1-201ENST00000278833 DNPEPQ9ULA0 475 aa26.44■■□□□ 1.82
ROM1-201ENST00000278833 TTLL13PA6NNM8 815 aa26.43■■□□□ 1.82
ROM1-201ENST00000278833 BRAFP15056 766 aa26.43■■□□□ 1.82
ROM1-201ENST00000278833 CDKN2BP42772 138 aa26.43■■□□□ 1.82
ROM1-201ENST00000278833 ASPAP45381 313 aa26.43■■□□□ 1.82
ROM1-201ENST00000278833 OGDHQ02218 1023 aa26.43■■□□□ 1.82
ROM1-201ENST00000278833 MPZL3Q6UWV2 235 aa26.43■■□□□ 1.82
ROM1-201ENST00000278833 ARHGEF18Q6ZSZ5 1173 aa26.43■■□□□ 1.82
ROM1-201ENST00000278833 TRPM8Q7Z2W7 1104 aa26.43■■□□□ 1.82
ROM1-201ENST00000278833 FUKQ8N0W3 1084 aa26.43■■□□□ 1.82
ROM1-201ENST00000278833 WDTC1Q8N5D0 677 aa26.43■■□□□ 1.82
ROM1-201ENST00000278833 MAML1Q92585 1016 aa26.43■■□□□ 1.82
ROM1-201ENST00000278833 MPHOSPH6Q99547 160 aaKnown RBP26.43■■□□□ 1.82
ROM1-201ENST00000278833 SPATC1LQ9H0A9 340 aa26.43■■□□□ 1.82
ROM1-201ENST00000278833 TPX2Q9ULW0 747 aaKnown RBP26.43■■□□□ 1.82
ROM1-201ENST00000278833 IVNS1ABPQ9Y6Y0 642 aa26.43■■□□□ 1.82
ROM1-201ENST00000278833 ZBTB42B2RXF5 422 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 BRD2P25440 801 aaKnown RBP26.42■■□□□ 1.82
ROM1-201ENST00000278833 DEFB115Q30KQ5 88 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 GPAT2Q6NUI2 795 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 GSTA5Q7RTV2 222 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 SLC35B2Q8TB61 432 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 MAGEC3Q8TD91 643 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 DYDC1Q8WWB3 177 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 HHIPL1Q96JK4 782 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 MAGEB18Q96M61 343 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 ELAC2Q9BQ52 826 aaKnown RBP26.42■■□□□ 1.82
ROM1-201ENST00000278833 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.42■■□□□ 1.82
ROM1-201ENST00000278833 CTNNAL1Q9UBT7 734 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 NAALADL1Q9UQQ1 740 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 USP15Q9Y4E8 981 aaPredicted RBP26.42■■□□□ 1.82
ROM1-201ENST00000278833 UNCXA6NJT0 531 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 GJB6O95452 261 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 VPS41P49754 854 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 SLC26A2P50443 739 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 TREML2Q5T2D2 321 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 RGMBQ6NW40 437 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 DCUN1D2Q6PH85 259 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 GPR20Q99678 358 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 FZD8Q9H461 694 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 FETUBQ9UGM5 382 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 CSADQ9Y600 493 aa26.42■■□□□ 1.82
ROM1-201ENST00000278833 IL18RAPO95256 599 aa26.41■■□□□ 1.82
ROM1-201ENST00000278833 CETPP11597 493 aa26.41■■□□□ 1.82
ROM1-201ENST00000278833 HARSP12081 509 aaKnown RBP26.41■■□□□ 1.82
ROM1-201ENST00000278833 POLR2BP30876 1174 aaKnown RBP26.41■■□□□ 1.82
ROM1-201ENST00000278833 SSR1P43307 286 aaKnown RBP26.41■■□□□ 1.82
ROM1-201ENST00000278833 IFNAR2P48551 515 aa26.41■■□□□ 1.82
ROM1-201ENST00000278833 ZNF157P51786 506 aaPredicted RBP26.41■■□□□ 1.82
ROM1-201ENST00000278833 TRPC3Q13507 836 aa26.41■■□□□ 1.82
ROM1-201ENST00000278833 ZNF699Q32M78 642 aa26.41■■□□□ 1.82
ROM1-201ENST00000278833 SEZ6Q53EL9 994 aa26.41■■□□□ 1.82
ROM1-201ENST00000278833 ERICH1Q86X53 443 aa26.41■■□□□ 1.82
ROM1-201ENST00000278833 GBP7Q8N8V2 638 aaPredicted RBP26.41■■□□□ 1.82
ROM1-201ENST00000278833 BCO2Q9BYV7 579 aa26.41■■□□□ 1.82
ROM1-201ENST00000278833 SENP1Q9P0U3 644 aa26.41■■□□□ 1.82
ROM1-201ENST00000278833 WDR35Q9P2L0 1181 aa26.41■■□□□ 1.82
ROM1-201ENST00000278833 CFAP73A6NFT4 308 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 ACKR2O00590 384 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 MED7O43513 233 aa26.4■■□□□ 1.82
ROM1-201ENST00000278833 TNNC2P02585 160 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms