RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 ARMC6Q6NXE6 501 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 RNF207Q6ZRF8 634 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 RHOUQ7L0Q8 258 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 SRLQ86TD4 932 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 C1orf210Q8IVY1 113 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 FAM186BQ8IYM0 893 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 FAM46DQ8NEK8 389 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 CACTINQ8WUQ7 758 aaKnown RBP5.46□□□□□ -1.54
CCDC54-201ENST00000261058 BRI3BPQ8WY22 251 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 NACC2Q96BF6 587 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 TNIP3Q96KP6 325 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 CCDC138Q96M89 665 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 RIPOR3Q96MK2 946 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 MPHOSPH6Q99547 160 aaKnown RBP5.46□□□□□ -1.54
CCDC54-201ENST00000261058 SMOQ99835 787 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 HEPHQ9BQS7 1158 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 PNPLA8Q9NP80 782 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 AKIP1Q9NQ31 210 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 SACM1LQ9NTJ5 587 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 PARPBPQ9NWS1 579 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 TMX2Q9Y320 296 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 SNX13Q9Y5W8 968 aa5.46□□□□□ -1.54
CCDC54-201ENST00000261058 SPATA31A3Q5VYP0 1347 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 PRAMEF33A0A0G2JMD5 474 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 MYADML2A6NDP7 307 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 TMEM200CA6NKL6 621 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 PYCARD-AS1I3L0S3 204 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 PRAMEF10O60809 474 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 NCR1O76036 304 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 CYP2C9P11712 490 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 BUD31P41223 144 aaPredicted RBP5.45□□□□□ -1.54
CCDC54-201ENST00000261058 STT3AP46977 705 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 ANXA11P50995 505 aaKnown RBP5.45□□□□□ -1.54
CCDC54-201ENST00000261058 CXADRP78310 365 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 CYP2A13Q16696 494 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 AMOTQ4VCS5 1084 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 SLC44A4Q53GD3 710 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 DGKKQ5KSL6 1271 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 TAF2Q6P1X5 1199 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 PALM2Q8IXS6 379 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 SLC15A4Q8N697 577 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 PSD4Q8NDX1 1056 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 MYEOVQ96EZ4 313 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 ADAM2Q99965 735 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 XPNPEP3Q9NQH7 507 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 TAGLN3Q9UI15 199 aa5.45□□□□□ -1.54
CCDC54-201ENST00000261058 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 POM121BA6NF01 834 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 TMEM233B4DJY2 109 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 FAM20BO75063 409 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 SOAT2O75908 522 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 FGF18O76093 207 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 MT-ND5P03915 603 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 PARP1P09874 1014 aaKnown RBP5.44□□□□□ -1.54
CCDC54-201ENST00000261058 TNFSF4P23510 183 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 MC2RQ01718 297 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 DYRK1AQ13627 763 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 LONRF3Q496Y0 759 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 DCAF12L1Q5VU92 463 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 IZUMO3Q5VZ72 239 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 XRRA1Q6P2D8 792 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 FAM109AQ8N4B1 249 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 NSUN7Q8NE18 718 aaKnown RBP5.44□□□□□ -1.54
CCDC54-201ENST00000261058 MOGAT1Q96PD6 335 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 RNF181Q9P0P0 153 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 MYO1AQ9UBC5 1043 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.44□□□□□ -1.54
CCDC54-201ENST00000261058 COMMD10Q9Y6G5 202 aa5.44□□□□□ -1.54
CCDC54-201ENST00000261058 CLCA1A8K7I4 914 aa5.43□□□□□ -1.54
CCDC54-201ENST00000261058 NCK2O43639 380 aa5.43□□□□□ -1.54
CCDC54-201ENST00000261058 ERN1O75460 977 aaKnown RBP5.43□□□□□ -1.54
CCDC54-201ENST00000261058 ANXA2P07355 339 aaKnown RBP5.43□□□□□ -1.54
CCDC54-201ENST00000261058 ATXN1LP0C7T5 689 aaKnown RBP5.43□□□□□ -1.54
CCDC54-201ENST00000261058 TXNP10599 105 aaKnown RBP5.43□□□□□ -1.54
CCDC54-201ENST00000261058 XRCC6P12956 609 aaKnown RBP eCLIP5.43□□□□□ -1.54
CCDC54-201ENST00000261058 ZNF134P52741 427 aa5.43□□□□□ -1.54
CCDC54-201ENST00000261058 SCAPQ12770 1279 aa5.43□□□□□ -1.54
CCDC54-201ENST00000261058 HLXQ14774 488 aaPredicted RBP5.43□□□□□ -1.54
CCDC54-201ENST00000261058 SP5Q6BEB4 398 aaPredicted RBP5.43□□□□□ -1.54
CCDC54-201ENST00000261058 HIBCHQ6NVY1 386 aaPredicted RBP5.43□□□□□ -1.54
CCDC54-201ENST00000261058 FOXR2Q6PJQ5 311 aa5.43□□□□□ -1.54
CCDC54-201ENST00000261058 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.43□□□□□ -1.54
CCDC54-201ENST00000261058 CLNKQ7Z7G1 428 aa5.43□□□□□ -1.54
CCDC54-201ENST00000261058 ZNF276Q8N554 614 aa5.43□□□□□ -1.54
CCDC54-201ENST00000261058 ATP11CQ8NB49 1132 aa5.43□□□□□ -1.54
CCDC54-201ENST00000261058 LENG9Q96B70 501 aa5.43□□□□□ -1.54
CCDC54-201ENST00000261058 ZNF503Q96F45 646 aa5.43□□□□□ -1.54
CCDC54-201ENST00000261058 SNX22Q96L94 193 aa5.43□□□□□ -1.54
CCDC54-201ENST00000261058 SLC46A1Q96NT5 459 aa5.43□□□□□ -1.54
CCDC54-201ENST00000261058 CHST8Q9H2A9 424 aa5.43□□□□□ -1.54
CCDC54-201ENST00000261058 SMOC2Q9H3U7 446 aa5.43□□□□□ -1.54
CCDC54-201ENST00000261058 SERHLQ9NQF3 203 aa5.43□□□□□ -1.54
CCDC54-201ENST00000261058 HS3ST4Q9Y661 456 aa5.43□□□□□ -1.54
CCDC54-201ENST00000261058 ABHD14A-ACY1A0A1B0GW23 586 aa5.42□□□□□ -1.54
CCDC54-201ENST00000261058 HLA-DOAP06340 250 aa5.42□□□□□ -1.54
CCDC54-201ENST00000261058 C1SP09871 688 aa5.42□□□□□ -1.54
CCDC54-201ENST00000261058 GCLCP48506 637 aaPredicted RBP5.42□□□□□ -1.54
CCDC54-201ENST00000261058 VAV2P52735 878 aa5.42□□□□□ -1.54
CCDC54-201ENST00000261058 LOXL3P58215 753 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms