RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 SPT14P32363 452 aa-4.02□□□□□ -3.05
snR40snR40 YGR164WP53291 111 aa-4.02□□□□□ -3.05
snR40snR40 YMR099CQ03161 297 aaKnown RBP-4.02□□□□□ -3.05
snR40snR40 TY1B-LR3P0C2I6 1755 aaKnown RBP-4.02□□□□□ -3.05
snR40snR40 TY1B-PR3P0C2J1 1755 aaKnown RBP-4.02□□□□□ -3.05
snR40snR40 RIM15P43565 1770 aa-4.03□□□□□ -3.05
snR40snR40 TIR1P10863 254 aa-4.03□□□□□ -3.05
snR40snR40 KSS1P14681 368 aa-4.03□□□□□ -3.05
snR40snR40 YHR127WP38833 243 aaKnown RBP-4.03□□□□□ -3.05
snR40snR40 AIM2P39721 246 aa-4.03□□□□□ -3.05
snR40snR40 YAR1P46683 200 aa-4.03□□□□□ -3.05
snR40snR40 RPS25BP0C0T4 108 aaKnown RBP-4.04□□□□□ -3.06
snR40snR40 RAD51P25454 400 aa-4.04□□□□□ -3.06
snR40snR40 SRP14P38985 146 aa-4.04□□□□□ -3.06
snR40snR40 SMB1P40018 196 aaKnown RBP-4.04□□□□□ -3.06
snR40snR40 NRK1P53915 240 aa-4.04□□□□□ -3.06
snR40snR40 GMC2Q06201 188 aa-4.04□□□□□ -3.06
snR40snR40 YDL157CQ12082 118 aa-4.04□□□□□ -3.06
snR40snR40 ATG31Q12421 196 aa-4.04□□□□□ -3.06
snR40snR40 RPS25AQ3E792 108 aaPredicted RBP-4.04□□□□□ -3.06
snR40snR40 CMC4Q3E7A9 73 aa-4.04□□□□□ -3.06
snR40snR40 SEC7P11075 2009 aaKnown RBP-4.04□□□□□ -3.06
snR40snR40 CYC2P38909 366 aa-4.05□□□□□ -3.06
snR40snR40 XPT1P47165 209 aa-4.05□□□□□ -3.06
snR40snR40 HKR1P41809 1802 aa-4.05□□□□□ -3.06
snR40snR40 GAL83Q04739 417 aa-4.06□□□□□ -3.06
snR40snR40 YHR050W-AQ05451 56 aa-4.06□□□□□ -3.06
snR40snR40 NMA1Q06178 401 aaKnown RBP-4.06□□□□□ -3.06
snR40snR40 DRS2P39524 1355 aa-4.06□□□□□ -3.06
snR40snR40 CKS1P20486 150 aaKnown RBP-4.07□□□□□ -3.06
snR40snR40 MGT1P26188 188 aa-4.07□□□□□ -3.06
snR40snR40 TCA17P32613 152 aa-4.07□□□□□ -3.06
snR40snR40 SRX1P36077 127 aa-4.07□□□□□ -3.06
snR40snR40 IPT1P38954 527 aa-4.07□□□□□ -3.06
snR40snR40 YEL014CP39999 101 aa-4.07□□□□□ -3.06
snR40snR40 SPC25P40014 221 aa-4.07□□□□□ -3.06
snR40snR40 AIM20P40451 204 aa-4.07□□□□□ -3.06
snR40snR40 RIB4P50861 169 aaPredicted RBP-4.07□□□□□ -3.06
snR40snR40 DYN3Q04949 312 aa-4.07□□□□□ -3.06
snR40snR40 TAL1P15019 335 aaKnown RBP-4.08□□□□□ -3.06
snR40snR40 PEX34P25584 144 aa-4.08□□□□□ -3.06
snR40snR40 CSM1P25651 190 aa-4.08□□□□□ -3.06
snR40snR40 HSP150P32478 413 aa-4.08□□□□□ -3.06
snR40snR40 MRPL11P36521 249 aaPredicted RBP-4.08□□□□□ -3.06
snR40snR40 YMR122CQ03879 124 aa-4.08□□□□□ -3.06
snR40snR40 KTI11Q3E840 82 aa-4.08□□□□□ -3.06
snR40snR40 YGL014C-AP0C5N1 53 aa-4.09□□□□□ -3.06
snR40snR40 YNL194CP40169 301 aa-4.09□□□□□ -3.06
snR40snR40 HNT1Q04344 158 aaKnown RBP-4.09□□□□□ -3.06
snR40snR40 YDR246W-AQ3E763 66 aa-4.09□□□□□ -3.06
snR40snR40 MEC1P38111 2368 aa-4.09□□□□□ -3.06
snR40snR40 YKL075CP36083 450 aa-4.1□□□□□ -3.07
snR40snR40 DAD2P36162 133 aa-4.1□□□□□ -3.07
snR40snR40 LRP1P38801 184 aaKnown RBP-4.1□□□□□ -3.07
snR40snR40 YER134CP40081 178 aa-4.1□□□□□ -3.07
snR40snR40 CDC123Q05791 360 aa-4.1□□□□□ -3.07
snR40snR40 CUR1Q06469 252 aa-4.1□□□□□ -3.07
snR40snR40 RPO41P13433 1351 aaKnown RBP-4.11□□□□□ -3.07
snR40snR40 YSR3P23501 404 aa-4.11□□□□□ -3.07
snR40snR40 YCR090CP25654 182 aaKnown RBP-4.11□□□□□ -3.07
snR40snR40 MTW1P39731 289 aa-4.11□□□□□ -3.07
snR40snR40 COA4Q05809 96 aa-4.11□□□□□ -3.07
snR40snR40 DAS2Q12084 232 aa-4.11□□□□□ -3.07
snR40snR40 MED4Q12343 284 aa-4.11□□□□□ -3.07
snR40snR40 MPD1Q12404 318 aaKnown RBP-4.11□□□□□ -3.07
snR40snR40 MET16P18408 261 aaPredicted RBP-4.12□□□□□ -3.07
snR40snR40 EMP24P32803 203 aaKnown RBP-4.12□□□□□ -3.07
snR40snR40 BFR1P38934 470 aaKnown RBP RIP-Chip data-4.12□□□□□ -3.07not detected
snR40snR40 END3P39013 349 aa-4.12□□□□□ -3.07
snR40snR40 YNL260CP53846 198 aa-4.12□□□□□ -3.07
snR40snR40 VPS28Q02767 242 aa-4.12□□□□□ -3.07
snR40snR40 LCL1Q02786 101 aa-4.12□□□□□ -3.07
snR40snR40 RUB1Q03919 77 aa-4.12□□□□□ -3.07
snR40snR40 URB1P34241 1764 aaKnown RBP-4.12□□□□□ -3.07
snR40snR40 CDC31P06704 161 aaKnown RBP-4.13□□□□□ -3.07
snR40snR40 NTG1P31378 399 aa-4.13□□□□□ -3.07
snR40snR40 SRL3P36167 246 aa-4.13□□□□□ -3.07
snR40snR40 PRS2P38620 318 aaKnown RBP-4.13□□□□□ -3.07
snR40snR40 YGR050CP53231 118 aa-4.13□□□□□ -3.07
snR40snR40 BTS1Q12051 335 aa-4.13□□□□□ -3.07
snR40snR40 YOR381W-AQ3E804 55 aa-4.13□□□□□ -3.07
snR40snR40 HIS1P00498 297 aaKnown RBP-4.14□□□□□ -3.07
snR40snR40 BMH2P34730 273 aaKnown RBP-4.14□□□□□ -3.07
snR40snR40 PET100P38958 111 aa-4.14□□□□□ -3.07
snR40snR40 COX15P40086 486 aa-4.14□□□□□ -3.07
snR40snR40 USE1P53146 245 aa-4.14□□□□□ -3.07
snR40snR40 EST3Q03096 181 aa-4.14□□□□□ -3.07
snR40snR40 YPR127WQ06494 345 aa-4.14□□□□□ -3.07
snR40snR40 YIL134C-AQ45U18 67 aa-4.14□□□□□ -3.07
snR40snR40 YRF1-6P53819 1859 aa-4.15□□□□□ -3.07
snR40snR40 YLR255CO13574 117 aa-4.15□□□□□ -3.07
snR40snR40 CDC37P06101 506 aaKnown RBP-4.15□□□□□ -3.07
snR40snR40 SAR1P20606 190 aaKnown RBP-4.15□□□□□ -3.07
snR40snR40 RRT1P38192 103 aa-4.15□□□□□ -3.07
snR40snR40 COX23P38824 151 aa-4.15□□□□□ -3.07
snR40snR40 YNL198CP40166 100 aa-4.15□□□□□ -3.07
snR40snR40 OST6Q03723 332 aa-4.15□□□□□ -3.07
snR40snR40 YLR126CQ12288 251 aa-4.15□□□□□ -3.07
snR40snR40 GCY1P14065 312 aaKnown RBP RIP-Chip data-4.16□□□□□ -3.08not detected
snR40snR40 FUN14P18411 198 aa-4.16□□□□□ -3.08
Retrieved 100 of 5,963 RNA–protein pairs in 75.2 ms