RNA–Protein interactions for RNA: YOR156C

NFI1, Transcript of SUMO E3 ligase, yeast

Gene NFI1, Length 2,181 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NFI1	YOR156C	GDB1	Q06625	1536 aa		2.69	□□□□□ -1.98
NFI1	YOR156C	YET3	Q07451	203 aa		2.69	□□□□□ -1.98
NFI1	YOR156C	YLR036C	Q07986	203 aa		2.69	□□□□□ -1.98
NFI1	YOR156C	SPO14	P36126	1683 aa		2.69	□□□□□ -1.98
NFI1	YOR156C	YOR093C	Q12275	1648 aa		2.69	□□□□□ -1.98
NFI1	YOR156C	AIM2	P39721	246 aa		2.68	□□□□□ -1.98
NFI1	YOR156C	POG1	P40473	351 aa		2.68	□□□□□ -1.98
NFI1	YOR156C	KNH1	P50112	268 aa		2.68	□□□□□ -1.98
NFI1	YOR156C	NUP49	Q02199	472 aa		2.68	□□□□□ -1.98
NFI1	YOR156C	DYN3	Q04949	312 aa		2.68	□□□□□ -1.98
NFI1	YOR156C	IQG1	Q12280	1495 aa		2.68	□□□□□ -1.98
NFI1	YOR156C	FLO9	P39712	1322 aa		2.68	□□□□□ -1.98
NFI1	YOR156C	VMA22	P38784	181 aa		2.68	□□□□□ -1.98
NFI1	YOR156C	YAR023C	D6VPM8	179 aa		2.67	□□□□□ -1.98
NFI1	YOR156C	SPO13	P23624	291 aa		2.67	□□□□□ -1.98
NFI1	YOR156C	YER134C	P40081	178 aa		2.67	□□□□□ -1.98
NFI1	YOR156C	TDA4	P47153	279 aa		2.67	□□□□□ -1.98
NFI1	YOR156C	SAY1	P53324	424 aa		2.67	□□□□□ -1.98
NFI1	YOR156C	YLR162W	Q06235	118 aa		2.67	□□□□□ -1.98
NFI1	YOR156C	ANT1	Q06497	328 aa		2.67	□□□□□ -1.98
NFI1	YOR156C	CSI2	Q08054	341 aa		2.67	□□□□□ -1.98
NFI1	YOR156C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
NFI1	YOR156C	TFC1	P32367	649 aa		2.67	□□□□□ -1.98
NFI1	YOR156C	YKR045C	P36138	183 aa		2.67	□□□□□ -1.98
NFI1	YOR156C	EGD2	P38879	174 aa	Known RBP	2.67	□□□□□ -1.98
NFI1	YOR156C	YOL014W	Q08110	124 aa		2.67	□□□□□ -1.98
NFI1	YOR156C	YML100W-A	Q8TGT0	57 aa		2.67	□□□□□ -1.98
NFI1	YOR156C	MET5	P47169	1442 aa		2.66	□□□□□ -1.98
NFI1	YOR156C	CHC1	P22137	1653 aa	Known RBP	2.66	□□□□□ -1.98
NFI1	YOR156C	TMA19	P35691	167 aa	Known RBP	2.66	□□□□□ -1.98
NFI1	YOR156C	DOP1	Q03921	1698 aa		2.66	□□□□□ -1.98
NFI1	YOR156C	MMS1	Q06211	1407 aa		2.66	□□□□□ -1.98
NFI1	YOR156C	NAT3	Q06504	195 aa		2.66	□□□□□ -1.98
NFI1	YOR156C	YIP3	P53633	176 aa		2.65	□□□□□ -1.99
NFI1	YOR156C	DNF2	Q12675	1612 aa		2.65	□□□□□ -1.99
NFI1	YOR156C	BUD3	P25558	1636 aa		2.64	□□□□□ -1.99
NFI1	YOR156C	RAD51	P25454	400 aa		2.64	□□□□□ -1.99
NFI1	YOR156C	FMP32	P43557	207 aa		2.64	□□□□□ -1.99
NFI1	YOR156C	ERJ5	P43613	295 aa	Predicted RBP	2.64	□□□□□ -1.99
NFI1	YOR156C	PGA1	P53896	198 aa		2.64	□□□□□ -1.99
NFI1	YOR156C	YMR099C	Q03161	297 aa	Known RBP	2.64	□□□□□ -1.99
NFI1	YOR156C	CUE4	Q04201	117 aa	Predicted RBP	2.64	□□□□□ -1.99
NFI1	YOR156C	BRX1	Q08235	291 aa	Known RBP	2.64	□□□□□ -1.99
NFI1	YOR156C	RPL35A	P0CX84	120 aa	Known RBP	2.64	□□□□□ -1.99
NFI1	YOR156C	RPL35B	P0CX85	120 aa	Known RBP	2.64	□□□□□ -1.99
NFI1	YOR156C	SEC11	P15367	167 aa		2.64	□□□□□ -1.99
NFI1	YOR156C	YER034W	P40022	185 aa	Known RBP	2.64	□□□□□ -1.99
NFI1	YOR156C	JAC1	P53193	184 aa		2.64	□□□□□ -1.99
NFI1	YOR156C	AIM34	Q03673	198 aa		2.64	□□□□□ -1.99
NFI1	YOR156C	RAD28	Q12021	506 aa		2.64	□□□□□ -1.99
NFI1	YOR156C	YRF1-1	P0CX20	1796 aa		2.64	□□□□□ -1.99
NFI1	YOR156C	YRF1-5	P0CX21	1796 aa		2.64	□□□□□ -1.99
NFI1	YOR156C	YRF1-8	P0CX22	1796 aa		2.64	□□□□□ -1.99
NFI1	YOR156C	MLP1	Q02455	1875 aa	Known RBP	2.63	□□□□□ -1.99
NFI1	YOR156C	CLG1	P35190	452 aa		2.63	□□□□□ -1.99
NFI1	YOR156C	NUP192	P47054	1683 aa		2.63	□□□□□ -1.99
NFI1	YOR156C	YSP2	Q06681	1438 aa		2.63	□□□□□ -1.99
NFI1	YOR156C	AHC2	P25649	128 aa		2.63	□□□□□ -1.99
NFI1	YOR156C	TRR1	P29509	319 aa	Known RBP	2.63	□□□□□ -1.99
NFI1	YOR156C	MTW1	P39731	289 aa		2.63	□□□□□ -1.99
NFI1	YOR156C	YFL019C	P43576	117 aa		2.63	□□□□□ -1.99
NFI1	YOR156C	LTE1	P07866	1435 aa		2.62	□□□□□ -1.99
NFI1	YOR156C	SNF2	P22082	1703 aa		2.62	□□□□□ -1.99
NFI1	YOR156C	RPS24A	P0CX31	135 aa	Known RBP	2.62	□□□□□ -1.99
NFI1	YOR156C	RPS24B	P0CX32	135 aa	Known RBP	2.62	□□□□□ -1.99
NFI1	YOR156C	ARO7	P32178	256 aa		2.61	□□□□□ -1.99
NFI1	YOR156C	MPD1	Q12404	318 aa	Known RBP	2.61	□□□□□ -1.99
NFI1	YOR156C	VMR1	P38735	1592 aa		2.61	□□□□□ -1.99
NFI1	YOR156C	MAK5	P38112	773 aa	Predicted RBP	2.61	□□□□□ -1.99
NFI1	YOR156C	GIM5	Q04493	163 aa		2.61	□□□□□ -1.99
NFI1	YOR156C	SHH4	Q06236	168 aa		2.61	□□□□□ -1.99
NFI1	YOR156C	SEC7	P11075	2009 aa	Known RBP	2.61	□□□□□ -1.99
NFI1	YOR156C	YGL010W	P25338	174 aa		2.6	□□□□□ -1.99
NFI1	YOR156C	NVJ1	P38881	321 aa		2.6	□□□□□ -1.99
NFI1	YOR156C	TVP23	P38962	199 aa		2.6	□□□□□ -1.99
NFI1	YOR156C	PDR11	P40550	1411 aa		2.6	□□□□□ -1.99
NFI1	YOR156C	NUP188	P52593	1655 aa	Known RBP	2.6	□□□□□ -1.99
NFI1	YOR156C	TIR1	P10863	254 aa		2.6	□□□□□ -1.99
NFI1	YOR156C	MGT1	P26188	188 aa		2.6	□□□□□ -1.99
NFI1	YOR156C	YNL247W	P53852	767 aa	Known RBP	2.6	□□□□□ -1.99
NFI1	YOR156C	YLR460C	P54007	376 aa		2.6	□□□□□ -1.99
NFI1	YOR156C	YOL162W	P0CF19	215 aa		2.59	□□□□□ -1.99
NFI1	YOR156C	UPS2	P35200	230 aa		2.59	□□□□□ -1.99
NFI1	YOR156C	YBR220C	P38318	560 aa		2.59	□□□□□ -1.99
NFI1	YOR156C	TMA22	P47089	198 aa	Predicted RBP	2.59	□□□□□ -1.99
NFI1	YOR156C	YMR295C	Q03559	197 aa		2.59	□□□□□ -1.99
NFI1	YOR156C	HAP1	P0CE41	1502 aa		2.59	□□□□□ -2
NFI1	YOR156C	IML1	P47170	1584 aa		2.59	□□□□□ -2
NFI1	YOR156C	PHO85	P17157	305 aa		2.59	□□□□□ -2
NFI1	YOR156C	YER076C	P40049	302 aa		2.59	□□□□□ -2
NFI1	YOR156C	GPI17	Q04080	534 aa		2.59	□□□□□ -2
NFI1	YOR156C	IRC23	Q08416	157 aa		2.59	□□□□□ -2
NFI1	YOR156C	YPR014C	Q6B0W2	109 aa		2.59	□□□□□ -2
NFI1	YOR156C	DNF3	Q12674	1656 aa		2.58	□□□□□ -2
NFI1	YOR156C	RPL2A	P0CX45	254 aa	Known RBP	2.58	□□□□□ -2
NFI1	YOR156C	RPL2B	P0CX46	254 aa	Known RBP	2.58	□□□□□ -2
NFI1	YOR156C	YKL102C	P34249	101 aa		2.58	□□□□□ -2
NFI1	YOR156C	GPI14	P47088	403 aa	Known RBP	2.58	□□□□□ -2
NFI1	YOR156C	SHH3	Q04487	196 aa		2.58	□□□□□ -2
NFI1	YOR156C	NSG1	P38837	291 aa		2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms