RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C GVP36P40531 326 aaKnown RBP1.25□□□□□ -2.21
SHE4YOR035C ERJ5P43613 295 aaPredicted RBP1.25□□□□□ -2.21
SHE4YOR035C RAD17P48581 401 aa1.25□□□□□ -2.21
SHE4YOR035C YHR214C-EQ8TGK0 99 aa1.25□□□□□ -2.21
SHE4YOR035C MSS2P40990 351 aa1.25□□□□□ -2.21
SHE4YOR035C RUD3Q12234 484 aaKnown RBP1.25□□□□□ -2.21
SHE4YOR035C YDR157WA0A023PZE8 133 aa1.24□□□□□ -2.21
SHE4YOR035C CDC33P07260 213 aaKnown RBP1.24□□□□□ -2.21
SHE4YOR035C IDH1P28834 360 aaKnown RBP RIP-Chip data1.24□□□□□ -2.21not detected
SHE4YOR035C TAF14P35189 244 aa1.24□□□□□ -2.21
SHE4YOR035C SIP3P38717 1229 aa1.24□□□□□ -2.21
SHE4YOR035C GPM2Q12008 311 aa1.24□□□□□ -2.21
SHE4YOR035C FSF1Q12029 327 aaKnown RBP1.24□□□□□ -2.21
SHE4YOR035C RIO1Q12196 484 aaKnown RBP1.23□□□□□ -2.21
SHE4YOR035C NCB2Q92317 146 aa1.23□□□□□ -2.21
SHE4YOR035C URA5P13298 226 aaKnown RBP1.23□□□□□ -2.21
SHE4YOR035C KSS1P14681 368 aa1.23□□□□□ -2.21
SHE4YOR035C BET1P22804 142 aa1.23□□□□□ -2.21
SHE4YOR035C TFC1P32367 649 aa1.23□□□□□ -2.21
SHE4YOR035C YBR209WP38311 105 aa1.23□□□□□ -2.21
SHE4YOR035C CWC23P52868 283 aaPredicted RBP1.23□□□□□ -2.21
SHE4YOR035C YGR050CP53231 118 aa1.23□□□□□ -2.21
SHE4YOR035C PDR17P53844 350 aa1.23□□□□□ -2.21
SHE4YOR035C ATG40Q99325 256 aa1.23□□□□□ -2.21
SHE4YOR035C SEC4P07560 215 aaKnown RBP1.22□□□□□ -2.21
SHE4YOR035C SPS18P32572 300 aa1.22□□□□□ -2.21
SHE4YOR035C ARG80P07249 177 aa1.22□□□□□ -2.21
SHE4YOR035C IRC18P47056 224 aa1.22□□□□□ -2.21
SHE4YOR035C YFR032C-BQ8TGU2 87 aa1.22□□□□□ -2.21
SHE4YOR035C RPL25P04456 142 aaKnown RBP1.21□□□□□ -2.22
SHE4YOR035C CPA1P07258 411 aaKnown RBP1.21□□□□□ -2.22
SHE4YOR035C YKL102CP34249 101 aa1.21□□□□□ -2.22
SHE4YOR035C YBR285WP38354 144 aa1.21□□□□□ -2.22
SHE4YOR035C PHB1P40961 287 aa1.21□□□□□ -2.22
SHE4YOR035C GCN20P43535 752 aaKnown RBP1.21□□□□□ -2.22
SHE4YOR035C YDR274CP87283 123 aa1.21□□□□□ -2.22
SHE4YOR035C PET191Q02772 108 aa1.21□□□□□ -2.22
SHE4YOR035C YDR249CQ03787 373 aa1.21□□□□□ -2.22
SHE4YOR035C RNH1Q04740 348 aa1.21□□□□□ -2.22
SHE4YOR035C GIS3Q12418 502 aa1.21□□□□□ -2.22
SHE4YOR035C TRM5P38793 499 aa1.21□□□□□ -2.22
SHE4YOR035C LSM7P53905 115 aaKnown RBP1.21□□□□□ -2.22
SHE4YOR035C BNA7Q04066 261 aa1.21□□□□□ -2.22
SHE4YOR035C MDM32Q12171 622 aa1.21□□□□□ -2.22
SHE4YOR035C KNH1P50112 268 aa1.2□□□□□ -2.22
SHE4YOR035C POP3P53833 195 aaPredicted RBP1.2□□□□□ -2.22
SHE4YOR035C YLR236CA0A023PZG4 107 aa1.2□□□□□ -2.22
SHE4YOR035C RPB3P16370 318 aaKnown RBP1.2□□□□□ -2.22
SHE4YOR035C MER1P16523 270 aa1.2□□□□□ -2.22
SHE4YOR035C PGA2P53903 129 aa1.2□□□□□ -2.22
SHE4YOR035C YOR342CQ12182 319 aa1.2□□□□□ -2.22
SHE4YOR035C YDL180WQ12301 547 aa1.2□□□□□ -2.22
SHE4YOR035C MAG1P22134 296 aaKnown RBP1.19□□□□□ -2.22
SHE4YOR035C YOL160WQ08321 113 aa1.19□□□□□ -2.22
SHE4YOR035C CKS1P20486 150 aaKnown RBP1.19□□□□□ -2.22
SHE4YOR035C CUS2P53830 285 aaPredicted RBP1.19□□□□□ -2.22
SHE4YOR035C COG5P53951 403 aa1.19□□□□□ -2.22
SHE4YOR035C CCW14O13547 238 aa1.18□□□□□ -2.22
SHE4YOR035C SIR2P06700 562 aa1.18□□□□□ -2.22
SHE4YOR035C ATP15P21306 62 aa1.18□□□□□ -2.22
SHE4YOR035C SHE2P36068 246 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
SHE4YOR035C YER076CP40049 302 aa1.18□□□□□ -2.22
SHE4YOR035C MPA43P53583 542 aaPredicted RBP1.18□□□□□ -2.22
SHE4YOR035C Q0297Q9ZZV8 51 aa1.18□□□□□ -2.22
SHE4YOR035C CYR1P08678 2026 aaKnown RBP1.18□□□□□ -2.22
SHE4YOR035C UBC6P33296 250 aaPredicted RBP1.18□□□□□ -2.22
SHE4YOR035C YCR087C-AP37263 153 aa1.18□□□□□ -2.22
SHE4YOR035C IKI1P38874 309 aa1.18□□□□□ -2.22
SHE4YOR035C CUE4Q04201 117 aaPredicted RBP1.18□□□□□ -2.22
SHE4YOR035C BPH1P25356 2167 aa1.17□□□□□ -2.22
SHE4YOR035C RAD28Q12021 506 aa1.17□□□□□ -2.22
SHE4YOR035C RPL27AP0C2H6 136 aaKnown RBP1.16□□□□□ -2.22
SHE4YOR035C AIM25P47140 327 aa1.16□□□□□ -2.22
SHE4YOR035C CWC21Q03375 135 aaKnown RBP1.16□□□□□ -2.22
SHE4YOR035C YNG1Q08465 219 aa1.16□□□□□ -2.22
SHE4YOR035C HTB1P02293 131 aaKnown RBP1.16□□□□□ -2.22
SHE4YOR035C HTB2P02294 131 aa1.16□□□□□ -2.22
SHE4YOR035C KDX1P36005 433 aa1.16□□□□□ -2.22
SHE4YOR035C UBC7Q02159 165 aa1.16□□□□□ -2.22
SHE4YOR035C CDC36P06100 191 aaPredicted RBP1.15□□□□□ -2.22
SHE4YOR035C SEC11P15367 167 aa1.15□□□□□ -2.22
SHE4YOR035C RFA3P26755 122 aaKnown RBP1.15□□□□□ -2.22
SHE4YOR035C OPY1P38271 328 aa1.15□□□□□ -2.22
SHE4YOR035C TIM11P81449 96 aaPredicted RBP1.15□□□□□ -2.22
SHE4YOR035C HNT1Q04344 158 aaKnown RBP1.15□□□□□ -2.22
SHE4YOR035C YNL146C-AQ3E7Z1 64 aa1.15□□□□□ -2.22
SHE4YOR035C RIO2P40160 425 aaKnown RBP1.15□□□□□ -2.23
SHE4YOR035C VMA22P38784 181 aa1.14□□□□□ -2.23
SHE4YOR035C FAS1P07149 2051 aaKnown RBP1.14□□□□□ -2.23
SHE4YOR035C CBF1P17106 351 aa1.13□□□□□ -2.23
SHE4YOR035C MAK31P23059 88 aa1.13□□□□□ -2.23
SHE4YOR035C NTG1P31378 399 aa1.13□□□□□ -2.23
SHE4YOR035C MRPL15P36523 253 aa1.13□□□□□ -2.23
SHE4YOR035C YHR007C-AQ07074 71 aa1.13□□□□□ -2.23
SHE4YOR035C VAR1P02381 398 aa1.13□□□□□ -2.23
SHE4YOR035C RPB4P20433 221 aaPredicted RBP1.13□□□□□ -2.23
SHE4YOR035C YCR090CP25654 182 aaKnown RBP1.13□□□□□ -2.23
SHE4YOR035C YMR226CQ05016 267 aaKnown RBP1.13□□□□□ -2.23
SHE4YOR035C ATG10Q07879 167 aa1.13□□□□□ -2.23
SHE4YOR035C POR1P04840 283 aaKnown RBP1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms