RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	YEA4	P40004	342 aa		7.49	□□□□□ -1.21
MSB4	YOL112W	SWM2	P40342	146 aa		7.49	□□□□□ -1.21
MSB4	YOL112W	YJR015W	P47090	510 aa		7.49	□□□□□ -1.21
MSB4	YOL112W	ERG25	P53045	309 aa		7.49	□□□□□ -1.21
MSB4	YOL112W	YGR018C	P53211	109 aa		7.49	□□□□□ -1.21
MSB4	YOL112W	CPD1	P53314	239 aa		7.49	□□□□□ -1.21
MSB4	YOL112W	SWT21	P53873	357 aa	Predicted RBP	7.49	□□□□□ -1.21
MSB4	YOL112W	POS5	Q06892	414 aa		7.49	□□□□□ -1.21
MSB4	YOL112W	FCF2	Q12035	217 aa	Predicted RBP	7.49	□□□□□ -1.21
MSB4	YOL112W	POM34	Q12445	299 aa		7.49	□□□□□ -1.21
MSB4	YOL112W	EMP24	P32803	203 aa	Known RBP	7.48	□□□□□ -1.21
MSB4	YOL112W	TDA6	Q06466	467 aa		7.48	□□□□□ -1.21
MSB4	YOL112W	YCR022C	P25620	114 aa		7.47	□□□□□ -1.21
MSB4	YOL112W	CDS1	P38221	457 aa		7.47	□□□□□ -1.21
MSB4	YOL112W	VMA22	P38784	181 aa		7.47	□□□□□ -1.21
MSB4	YOL112W	ASP1	P38986	381 aa	Predicted RBP	7.47	□□□□□ -1.21
MSB4	YOL112W	BDH1	P39714	382 aa		7.47	□□□□□ -1.21
MSB4	YOL112W	GCV3	P39726	170 aa	Predicted RBP	7.47	□□□□□ -1.21
MSB4	YOL112W	CAB4	P53332	305 aa		7.47	□□□□□ -1.21
MSB4	YOL112W	ARR3	Q06598	404 aa		7.47	□□□□□ -1.21
MSB4	YOL112W	YBR298C-A	Q8TGK4	73 aa		7.47	□□□□□ -1.21
MSB4	YOL112W	YMR316C-A	I2HB70	103 aa		7.46	□□□□□ -1.22
MSB4	YOL112W	PIS1	P06197	220 aa	Known RBP	7.46	□□□□□ -1.22
MSB4	YOL112W	YHR212W-A	P0CX91	67 aa		7.46	□□□□□ -1.22
MSB4	YOL112W	IMD2	P38697	523 aa	Known RBP	7.46	□□□□□ -1.22
MSB4	YOL112W	SYG1	P40528	902 aa		7.46	□□□□□ -1.22
MSB4	YOL112W	YDL242W	Q07746	117 aa		7.46	□□□□□ -1.22
MSB4	YOL112W	UBI4	P0CG63	381 aa	Known RBP	7.45	□□□□□ -1.22
MSB4	YOL112W	SIP1	P32578	815 aa		7.45	□□□□□ -1.22
MSB4	YOL112W	RRT1	P38192	103 aa		7.45	□□□□□ -1.22
MSB4	YOL112W	MIC12	P38341	106 aa		7.45	□□□□□ -1.22
MSB4	YOL112W	YDR157W	A0A023PZE8	133 aa		7.44	□□□□□ -1.22
MSB4	YOL112W	ELO2	P25358	347 aa		7.44	□□□□□ -1.22
MSB4	YOL112W	CSH1	P38287	376 aa		7.44	□□□□□ -1.22
MSB4	YOL112W	SNU13	P39990	126 aa	Known RBP	7.44	□□□□□ -1.22
MSB4	YOL112W	LST7	P53237	242 aa		7.44	□□□□□ -1.22
MSB4	YOL112W	YAP1802	P53309	568 aa		7.44	□□□□□ -1.22
MSB4	YOL112W	PRM3	Q08931	133 aa		7.44	□□□□□ -1.22
MSB4	YOL112W	AVT5	P38176	459 aa		7.43	□□□□□ -1.22
MSB4	YOL112W	YNL194C	P40169	301 aa		7.43	□□□□□ -1.22
MSB4	YOL112W	BUL1	P48524	976 aa		7.43	□□□□□ -1.22
MSB4	YOL112W	COA4	Q05809	96 aa		7.43	□□□□□ -1.22
MSB4	YOL112W	YLR179C	Q06252	201 aa	Known RBP	7.43	□□□□□ -1.22
MSB4	YOL112W	CTR3	Q06686	241 aa		7.43	□□□□□ -1.22
MSB4	YOL112W	CYC3	P06182	269 aa		7.43	□□□□□ -1.22
MSB4	YOL112W	CDC50	P25656	391 aa		7.43	□□□□□ -1.22
MSB4	YOL112W	MIG1	P27705	504 aa		7.43	□□□□□ -1.22
MSB4	YOL112W	FPR2	P32472	135 aa		7.43	□□□□□ -1.22
MSB4	YOL112W	PEX7	P39108	375 aa		7.43	□□□□□ -1.22
MSB4	YOL112W	BOR1	P53838	576 aa		7.43	□□□□□ -1.22
MSB4	YOL112W	VPS71	Q03433	280 aa		7.43	□□□□□ -1.22
MSB4	YOL112W	YMR007W	Q03675	126 aa		7.43	□□□□□ -1.22
MSB4	YOL112W	SHH3	Q04487	196 aa		7.43	□□□□□ -1.22
MSB4	YOL112W	CDC7	P06243	507 aa		7.42	□□□□□ -1.22
MSB4	YOL112W	SPO13	P23624	291 aa		7.42	□□□□□ -1.22
MSB4	YOL112W	POP5	P28005	173 aa		7.42	□□□□□ -1.22
MSB4	YOL112W	AHT1	P29589	182 aa		7.42	□□□□□ -1.22
MSB4	YOL112W	YBL059W	P34224	193 aa		7.42	□□□□□ -1.22
MSB4	YOL112W	YJL027C	P47063	138 aa	Predicted RBP	7.42	□□□□□ -1.22
MSB4	YOL112W	SRB7	P47822	140 aa		7.42	□□□□□ -1.22
MSB4	YOL112W	MIC27	P50945	234 aa		7.42	□□□□□ -1.22
MSB4	YOL112W	MRPS17	Q03246	237 aa	Predicted RBP	7.42	□□□□□ -1.22
MSB4	YOL112W	TIM18	Q08749	192 aa		7.42	□□□□□ -1.22
MSB4	YOL112W	YPR013C	Q12145	317 aa		7.42	□□□□□ -1.22
MSB4	YOL112W	MSN1	P22148	382 aa		7.41	□□□□□ -1.22
MSB4	YOL112W	SHB17	P36136	271 aa	Known RBP	7.41	□□□□□ -1.22
MSB4	YOL112W	CAX4	P53223	239 aa		7.41	□□□□□ -1.22
MSB4	YOL112W	YNR066C	P53752	436 aa		7.41	□□□□□ -1.22
MSB4	YOL112W	TDH1	P00360	332 aa	Known RBP	7.4	□□□□□ -1.22
MSB4	YOL112W	PTC7	P38797	343 aa		7.4	□□□□□ -1.22
MSB4	YOL112W	GLE2	P40066	365 aa		7.4	□□□□□ -1.22
MSB4	YOL112W	ATG27	P46989	271 aa		7.4	□□□□□ -1.22
MSB4	YOL112W	NCE103	P53615	221 aa		7.4	□□□□□ -1.22
MSB4	YOL112W	ODC1	Q03028	310 aa		7.4	□□□□□ -1.22
MSB4	YOL112W	YOR015W	Q12169	119 aa		7.4	□□□□□ -1.22
MSB4	YOL112W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	7.39	□□□□□ -1.23	not detected
MSB4	YOL112W	YHR213W	P0CI67	198 aa		7.39	□□□□□ -1.23
MSB4	YOL112W	YBR144C	P34215	104 aa		7.39	□□□□□ -1.23
MSB4	YOL112W	DER1	P38307	211 aa		7.39	□□□□□ -1.23
MSB4	YOL112W	FLO5	P38894	1075 aa		7.39	□□□□□ -1.23
MSB4	YOL112W	MRPL49	P40858	161 aa	Predicted RBP	7.39	□□□□□ -1.23
MSB4	YOL112W	CAF16	P43569	289 aa		7.39	□□□□□ -1.23
MSB4	YOL112W	HST4	P53688	370 aa		7.39	□□□□□ -1.23
MSB4	YOL112W	ADD37	Q03233	198 aa		7.39	□□□□□ -1.23
MSB4	YOL112W	AVO2	Q04749	426 aa		7.39	□□□□□ -1.23
MSB4	YOL112W	QCR9	P22289	66 aa		7.38	□□□□□ -1.23
MSB4	YOL112W	POR2	P40478	281 aa		7.38	□□□□□ -1.23
MSB4	YOL112W	RTS2	P40962	232 aa		7.38	□□□□□ -1.23
MSB4	YOL112W	YPI1	P43587	155 aa		7.38	□□□□□ -1.23
MSB4	YOL112W	PHO23	P50947	330 aa		7.38	□□□□□ -1.23
MSB4	YOL112W	FMP16	Q12497	93 aa		7.38	□□□□□ -1.23
MSB4	YOL112W	RTG1	P32607	177 aa		7.37	□□□□□ -1.23
MSB4	YOL112W	UTR5	P32630	166 aa		7.37	□□□□□ -1.23
MSB4	YOL112W	EMC5	P40540	141 aa		7.37	□□□□□ -1.23
MSB4	YOL112W	IMP2	P46972	177 aa		7.37	□□□□□ -1.23
MSB4	YOL112W	TAR1	Q8TGM6	124 aa		7.37	□□□□□ -1.23
MSB4	YOL112W	ALK2	P32789	676 aa	Predicted RBP	7.36	□□□□□ -1.23
MSB4	YOL112W	LSM2	P38203	95 aa	Known RBP	7.36	□□□□□ -1.23
MSB4	YOL112W	PET100	P38958	111 aa		7.36	□□□□□ -1.23
MSB4	YOL112W	SDH7	Q04401	133 aa		7.36	□□□□□ -1.23

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms