RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP1	YOL006C	YML100W-A	Q8TGT0	57 aa		2.69	□□□□□ -1.98
TOP1	YOL006C	YKR070W	P36151	352 aa	Known RBP	2.69	□□□□□ -1.98
TOP1	YOL006C	GVP36	P40531	326 aa	Known RBP	2.69	□□□□□ -1.98
TOP1	YOL006C	PFS2	P42841	465 aa	Known RBP	2.69	□□□□□ -1.98
TOP1	YOL006C	YDR115W	Q04598	105 aa		2.69	□□□□□ -1.98
TOP1	YOL006C	YOL014W	Q08110	124 aa		2.69	□□□□□ -1.98
TOP1	YOL006C	YLR412C-A	Q3E742	68 aa		2.69	□□□□□ -1.98
TOP1	YOL006C	VAR1	P02381	398 aa		2.68	□□□□□ -1.98
TOP1	YOL006C	SPS2	P08459	502 aa		2.68	□□□□□ -1.98
TOP1	YOL006C	URA5	P13298	226 aa	Known RBP	2.68	□□□□□ -1.98
TOP1	YOL006C	RPL14A	P36105	138 aa	Known RBP	2.68	□□□□□ -1.98
TOP1	YOL006C	SHB17	P36136	271 aa	Known RBP	2.68	□□□□□ -1.98
TOP1	YOL006C	RPL14B	P38754	138 aa	Known RBP	2.68	□□□□□ -1.98
TOP1	YOL006C	YJL218W	P40892	196 aa	Known RBP	2.68	□□□□□ -1.98
TOP1	YOL006C	YFL019C	P43576	117 aa		2.68	□□□□□ -1.98
TOP1	YOL006C	BUD25	P85052	153 aa		2.68	□□□□□ -1.98
TOP1	YOL006C	MCP1	Q12106	302 aa		2.68	□□□□□ -1.98
TOP1	YOL006C	SMT3	Q12306	101 aa	Known RBP	2.68	□□□□□ -1.98
TOP1	YOL006C	GLT1	Q12680	2145 aa	Known RBP	2.68	□□□□□ -1.98
TOP1	YOL006C	TAD3	Q9URQ3	322 aa		2.68	□□□□□ -1.98
TOP1	YOL006C	ADH3	P07246	375 aa	Known RBP	2.68	□□□□□ -1.98
TOP1	YOL006C	YLR156W	P0CE96	114 aa		2.68	□□□□□ -1.98
TOP1	YOL006C	YLR159W	P0CE97	114 aa		2.68	□□□□□ -1.98
TOP1	YOL006C	YLR161W	P0CE98	114 aa		2.68	□□□□□ -1.98
TOP1	YOL006C	SDH3	P33421	198 aa		2.68	□□□□□ -1.98
TOP1	YOL006C	AIM18	P38884	321 aa		2.68	□□□□□ -1.98
TOP1	YOL006C	YAR068W	P39564	161 aa		2.68	□□□□□ -1.98
TOP1	YOL006C	RIO2	P40160	425 aa	Known RBP	2.68	□□□□□ -1.98
TOP1	YOL006C	API2	Q04413	109 aa		2.68	□□□□□ -1.98
TOP1	YOL006C	PST1	Q12355	444 aa		2.68	□□□□□ -1.98
TOP1	YOL006C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
TOP1	YOL006C	MRPL15	P36523	253 aa		2.67	□□□□□ -1.98
TOP1	YOL006C	ETR1	P38071	380 aa		2.67	□□□□□ -1.98
TOP1	YOL006C	SYS1	P41544	203 aa		2.67	□□□□□ -1.98
TOP1	YOL006C	YKR005C	Q02203	525 aa		2.67	□□□□□ -1.98
TOP1	YOL006C	NAT3	Q06504	195 aa		2.67	□□□□□ -1.98
TOP1	YOL006C	VMA11	P32842	164 aa		2.67	□□□□□ -1.98
TOP1	YOL006C	YNL200C	P40165	246 aa	Known RBP	2.67	□□□□□ -1.98
TOP1	YOL006C	FIS1	P40515	155 aa		2.67	□□□□□ -1.98
TOP1	YOL006C	YGL118C	P53132	145 aa		2.67	□□□□□ -1.98
TOP1	YOL006C	OSH6	Q02201	448 aa		2.67	□□□□□ -1.98
TOP1	YOL006C	YLR281C	Q05863	155 aa		2.67	□□□□□ -1.98
TOP1	YOL006C	YPL247C	Q12523	523 aa		2.67	□□□□□ -1.98
TOP1	YOL006C	KTI11	Q3E840	82 aa		2.67	□□□□□ -1.98
TOP1	YOL006C	DNF2	Q12675	1612 aa		2.66	□□□□□ -1.98
TOP1	YOL006C	ANB1	P19211	157 aa		2.66	□□□□□ -1.98
TOP1	YOL006C	SEC59	P20048	519 aa		2.66	□□□□□ -1.98
TOP1	YOL006C	ATP15	P21306	62 aa		2.66	□□□□□ -1.98
TOP1	YOL006C	AHT1	P29589	182 aa		2.66	□□□□□ -1.98
TOP1	YOL006C	DAD3	P69850	94 aa		2.66	□□□□□ -1.98
TOP1	YOL006C	RNH202	Q05635	350 aa		2.66	□□□□□ -1.98
TOP1	YOL006C	OCA6	Q12454	224 aa		2.66	□□□□□ -1.98
TOP1	YOL006C	PDR15	Q04182	1529 aa	Known RBP	2.66	□□□□□ -1.98
TOP1	YOL006C	PAN1	P32521	1480 aa		2.65	□□□□□ -1.98
TOP1	YOL006C	REP2	P03872	296 aa		2.65	□□□□□ -1.98
TOP1	YOL006C	RNP1	P32385	249 aa		2.65	□□□□□ -1.98
TOP1	YOL006C	YER134C	P40081	178 aa		2.65	□□□□□ -1.98
TOP1	YOL006C	YGL230C	P53074	147 aa		2.65	□□□□□ -1.98
TOP1	YOL006C	SPG3	Q04398	127 aa	Predicted RBP	2.65	□□□□□ -1.98
TOP1	YOL006C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	2.65	□□□□□ -1.98	not detected
TOP1	YOL006C	HUT1	Q12520	339 aa		2.65	□□□□□ -1.98
TOP1	YOL006C	FYV4	P38783	130 aa	Predicted RBP	2.65	□□□□□ -1.99
TOP1	YOL006C	PTH1	P38876	190 aa	Known RBP	2.65	□□□□□ -1.99
TOP1	YOL006C	ASP1	P38986	381 aa	Predicted RBP	2.65	□□□□□ -1.99
TOP1	YOL006C	VTC1	P40046	129 aa	RIP-Chip data	2.65	□□□□□ -1.99	not detected
TOP1	YOL006C	YIL152W	P40455	235 aa		2.65	□□□□□ -1.99
TOP1	YOL006C	EST3	Q03096	181 aa		2.65	□□□□□ -1.99
TOP1	YOL006C	TVP15	Q03860	143 aa		2.65	□□□□□ -1.99
TOP1	YOL006C	IRC25	Q07951	179 aa		2.65	□□□□□ -1.99
TOP1	YOL006C	YLR042C	Q07990	161 aa		2.65	□□□□□ -1.99
TOP1	YOL006C	DFM1	Q12743	341 aa	Known RBP	2.65	□□□□□ -1.99
TOP1	YOL006C	YEL009C-A	A0A023PZF2	135 aa		2.64	□□□□□ -1.99
TOP1	YOL006C	HTD2	P38790	280 aa	Known RBP	2.64	□□□□□ -1.99
TOP1	YOL006C	YIL054W	P40524	105 aa		2.64	□□□□□ -1.99
TOP1	YOL006C	SBH1	P52870	82 aa		2.64	□□□□□ -1.99
TOP1	YOL006C	YOL029C	Q08187	201 aa		2.64	□□□□□ -1.99
TOP1	YOL006C	NTE1	Q04958	1679 aa		2.64	□□□□□ -1.99
TOP1	YOL006C	HSP12	P22943	109 aa	Known RBP	2.64	□□□□□ -1.99
TOP1	YOL006C	RCN1	P36054	211 aa		2.64	□□□□□ -1.99
TOP1	YOL006C	RPB11	P38902	120 aa		2.64	□□□□□ -1.99
TOP1	YOL006C	YCL021W-A	Q96VH3	125 aa		2.64	□□□□□ -1.99
TOP1	YOL006C	SSK2	P53599	1579 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	YAR023C	D6VPM8	179 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	YGL041W-A	P0C5N3	154 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	YND1	P40009	630 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	EMC4	P53073	190 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	ELC1	Q03071	99 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	NHP10	Q03435	203 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	PBA1	Q05778	276 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	ECM19	Q06011	112 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	YER078W-A	Q3E7A2	54 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	ISD11	Q6Q560	94 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	CPA1	P07258	411 aa	Known RBP	2.63	□□□□□ -1.99
TOP1	YOL006C	GPI18	P38211	433 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	YBR090C	P38253	122 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	IGD1	P43598	195 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	DIE2	P50076	525 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	GEP7	P53171	287 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	TVP18	Q04767	167 aa		2.63	□□□□□ -1.99
TOP1	YOL006C	ATO3	Q12359	275 aa		2.63	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms