RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C NVJ1P38881 321 aa2.15□□□□□ -2.07
PML39YML107C PEX17P40155 199 aa2.15□□□□□ -2.07
PML39YML107C BAT2P47176 376 aaKnown RBP2.15□□□□□ -2.07
PML39YML107C BXI1P48558 297 aa2.15□□□□□ -2.07
PML39YML107C VMA10P48836 114 aaKnown RBP2.15□□□□□ -2.07
PML39YML107C YGL204CP53089 101 aa2.15□□□□□ -2.07
PML39YML107C ATG39Q06159 398 aa2.15□□□□□ -2.07
PML39YML107C FKS1P38631 1876 aaKnown RBP2.15□□□□□ -2.07
PML39YML107C HKR1P41809 1802 aa2.14□□□□□ -2.07
PML39YML107C RPL9AP05738 191 aaKnown RBP2.14□□□□□ -2.07
PML39YML107C SFK1P35735 353 aa2.14□□□□□ -2.07
PML39YML107C YAR068WP39564 161 aa2.14□□□□□ -2.07
PML39YML107C FCY21P40039 528 aa2.14□□□□□ -2.07
PML39YML107C SMD3P43321 101 aaKnown RBP2.14□□□□□ -2.07
PML39YML107C RPL9BP51401 191 aaKnown RBP2.14□□□□□ -2.07
PML39YML107C PRM8P53174 237 aa2.14□□□□□ -2.07
PML39YML107C YNL184CP53876 108 aa2.14□□□□□ -2.07
PML39YML107C DAD3P69850 94 aa2.14□□□□□ -2.07
PML39YML107C YMR320WQ04897 101 aa2.14□□□□□ -2.07
PML39YML107C DYN3Q04949 312 aa2.14□□□□□ -2.07
PML39YML107C YOL024WQ08172 172 aa2.14□□□□□ -2.07
PML39YML107C YOL160WQ08321 113 aa2.14□□□□□ -2.07
PML39YML107C BOL1Q3E793 110 aa2.14□□□□□ -2.07
PML39YML107C YLR361C-AQ3E795 98 aa2.14□□□□□ -2.07
PML39YML107C MGT1P26188 188 aa2.13□□□□□ -2.07
PML39YML107C TCA17P32613 152 aa2.13□□□□□ -2.07
PML39YML107C DOG1P38774 246 aa2.13□□□□□ -2.07
PML39YML107C YER137CP40083 148 aaKnown RBP2.13□□□□□ -2.07
PML39YML107C CIS3P47001 227 aa2.13□□□□□ -2.07
PML39YML107C SOL1P50278 321 aa2.13□□□□□ -2.07
PML39YML107C TMA20P89886 181 aaPredicted RBP2.13□□□□□ -2.07
PML39YML107C HNT1Q04344 158 aaKnown RBP2.13□□□□□ -2.07
PML39YML107C YLR036CQ07986 203 aa2.13□□□□□ -2.07
PML39YML107C EFG1Q3E705 233 aaKnown RBP2.13□□□□□ -2.07
PML39YML107C YOR020W-AQ3E824 90 aa2.13□□□□□ -2.07
PML39YML107C IGO2Q9P305 131 aa2.13□□□□□ -2.07
PML39YML107C TRX3P25372 127 aa2.12□□□□□ -2.07
PML39YML107C PDS1P40316 373 aaPredicted RBP2.12□□□□□ -2.07
PML39YML107C CAT5P41735 233 aa2.12□□□□□ -2.07
PML39YML107C YGR201CP42936 225 aa2.12□□□□□ -2.07
PML39YML107C FAR7P43592 221 aa2.12□□□□□ -2.07
PML39YML107C YFR054CP43622 192 aa2.12□□□□□ -2.07
PML39YML107C AIM25P47140 327 aa2.12□□□□□ -2.07
PML39YML107C AIM34Q03673 198 aa2.12□□□□□ -2.07
PML39YML107C YPR202WQ08993 238 aa2.12□□□□□ -2.07
PML39YML107C YHR214C-EQ8TGK0 99 aa2.12□□□□□ -2.07
PML39YML107C RIB3Q99258 208 aa2.12□□□□□ -2.07
PML39YML107C RAD50P12753 1312 aa2.12□□□□□ -2.07
PML39YML107C BEM2P39960 2167 aaKnown RBP2.11□□□□□ -2.07
PML39YML107C FCY2P17064 533 aa2.11□□□□□ -2.07
PML39YML107C AHC2P25649 128 aa2.11□□□□□ -2.07
PML39YML107C PEX4P29340 183 aa2.11□□□□□ -2.07
PML39YML107C CSH1P38287 376 aa2.11□□□□□ -2.07
PML39YML107C TRS20P38334 175 aa2.11□□□□□ -2.07
PML39YML107C YGR219WP53307 113 aa2.11□□□□□ -2.07
PML39YML107C ERV29P53337 310 aa2.11□□□□□ -2.07
PML39YML107C LSM7P53905 115 aaKnown RBP2.11□□□□□ -2.07
PML39YML107C YLR031WQ07978 186 aa2.11□□□□□ -2.07
PML39YML107C NIP7Q08962 181 aaKnown RBP2.11□□□□□ -2.07
PML39YML107C MSW1P04803 379 aa2.1□□□□□ -2.07
PML39YML107C PTM1P32857 523 aa2.1□□□□□ -2.07
PML39YML107C APS1P35181 156 aa2.1□□□□□ -2.07
PML39YML107C FMP23P38231 175 aa2.1□□□□□ -2.07
PML39YML107C IPI1P38803 334 aaPredicted RBP2.1□□□□□ -2.07
PML39YML107C CTR2P38865 189 aa2.1□□□□□ -2.07
PML39YML107C LSM4P40070 187 aaKnown RBP2.1□□□□□ -2.07
PML39YML107C YGR050CP53231 118 aa2.1□□□□□ -2.07
PML39YML107C SWP1Q02795 286 aa2.1□□□□□ -2.07
PML39YML107C MRPS8Q03799 155 aa2.1□□□□□ -2.07
PML39YML107C YLR046CQ12253 270 aa2.1□□□□□ -2.07
PML39YML107C PEX11Q12462 236 aa2.1□□□□□ -2.07
PML39YML107C MRPS28P21771 286 aa2.09□□□□□ -2.07
PML39YML107C IDP1P21954 428 aaKnown RBP2.09□□□□□ -2.07
PML39YML107C DOG2P38773 246 aa2.09□□□□□ -2.07
PML39YML107C VMA22P38784 181 aa2.09□□□□□ -2.07
PML39YML107C RPF1P38805 295 aaKnown RBP2.09□□□□□ -2.07
PML39YML107C TIM8P57744 87 aa2.09□□□□□ -2.07
PML39YML107C YDR249CQ03787 373 aa2.09□□□□□ -2.07
PML39YML107C WIP1Q2V2P8 89 aa2.09□□□□□ -2.07
PML39YML107C ECM29P38737 1868 aa2.08□□□□□ -2.08
PML39YML107C CDC7P06243 507 aa2.08□□□□□ -2.08
PML39YML107C CMD1P06787 147 aaKnown RBP2.08□□□□□ -2.08
PML39YML107C RPL2AP0CX45 254 aaKnown RBP2.08□□□□□ -2.08
PML39YML107C RPL2BP0CX46 254 aaKnown RBP2.08□□□□□ -2.08
PML39YML107C RPS1AP33442 255 aaKnown RBP2.08□□□□□ -2.08
PML39YML107C YKL102CP34249 101 aa2.08□□□□□ -2.08
PML39YML107C PRS3P38689 320 aaKnown RBP2.08□□□□□ -2.08
PML39YML107C AST2P39945 430 aaKnown RBP2.08□□□□□ -2.08
PML39YML107C ERG25P53045 309 aa2.08□□□□□ -2.08
PML39YML107C ORM1P53224 222 aa2.08□□□□□ -2.08
PML39YML107C DYN2Q02647 92 aa2.08□□□□□ -2.08
PML39YML107C GPI17Q04080 534 aa2.08□□□□□ -2.08
PML39YML107C TRM12Q04235 462 aa2.08□□□□□ -2.08
PML39YML107C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
PML39YML107C SIR2P06700 562 aa2.07□□□□□ -2.08
PML39YML107C UBI4P0CG63 381 aaKnown RBP2.07□□□□□ -2.08
PML39YML107C SCL1P21243 252 aaKnown RBP2.07□□□□□ -2.08
PML39YML107C CNB1P25296 175 aa2.07□□□□□ -2.08
PML39YML107C BUB2P26448 306 aaPredicted RBP2.07□□□□□ -2.08
PML39YML107C SEC17P32602 292 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms