RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C TRI1Q05024 226 aa4.73□□□□□ -1.65
VPS1YKR001C SNT309Q06091 175 aaPredicted RBP4.73□□□□□ -1.65
VPS1YKR001C ENB1Q08299 606 aa4.73□□□□□ -1.65
VPS1YKR001C ZRT1P32804 376 aa4.73□□□□□ -1.65
VPS1YKR001C GON7P46984 123 aa4.73□□□□□ -1.65
VPS1YKR001C TAD2P47058 250 aa4.73□□□□□ -1.65
VPS1YKR001C HMS2P47175 358 aa4.73□□□□□ -1.65
VPS1YKR001C ERG26P53199 349 aaKnown RBP4.73□□□□□ -1.65
VPS1YKR001C INP1Q03694 420 aa4.73□□□□□ -1.65
VPS1YKR001C ACM1Q08981 209 aa4.73□□□□□ -1.65
VPS1YKR001C FCY1Q12178 158 aa4.73□□□□□ -1.65
VPS1YKR001C KTI11Q3E840 82 aa4.73□□□□□ -1.65
VPS1YKR001C FMP49A0A023PZB3 126 aa4.72□□□□□ -1.65
VPS1YKR001C CYC1P00044 109 aaPredicted RBP4.72□□□□□ -1.65
VPS1YKR001C RAS2P01120 322 aaKnown RBP4.72□□□□□ -1.65
VPS1YKR001C SIR2P06700 562 aa4.72□□□□□ -1.65
VPS1YKR001C YCR006CP25350 157 aa4.72□□□□□ -1.65
VPS1YKR001C MRP17P28778 131 aa4.72□□□□□ -1.65
VPS1YKR001C REC114P32841 428 aa4.72□□□□□ -1.65
VPS1YKR001C TIM17P39515 158 aa4.72□□□□□ -1.65
VPS1YKR001C PAM16P42949 149 aa4.72□□□□□ -1.65
VPS1YKR001C OST2P46964 130 aa4.72□□□□□ -1.65
VPS1YKR001C PRM8P53174 237 aa4.72□□□□□ -1.65
VPS1YKR001C BIO4P53630 237 aa4.72□□□□□ -1.65
VPS1YKR001C SMM1P53720 384 aaKnown RBP4.72□□□□□ -1.65
VPS1YKR001C YNR071CP53757 342 aa4.72□□□□□ -1.65
VPS1YKR001C LSM7P53905 115 aaKnown RBP4.72□□□□□ -1.65
VPS1YKR001C UPS1Q05776 175 aa4.72□□□□□ -1.65
VPS1YKR001C EAF3Q12432 401 aa4.72□□□□□ -1.65
VPS1YKR001C YLR149CQ99296 730 aa4.72□□□□□ -1.65
VPS1YKR001C YLL053CP0CD98 152 aa4.72□□□□□ -1.65
VPS1YKR001C RPL2AP0CX45 254 aaKnown RBP4.72□□□□□ -1.65
VPS1YKR001C RPL2BP0CX46 254 aaKnown RBP4.72□□□□□ -1.65
VPS1YKR001C NUD1P32336 851 aa4.72□□□□□ -1.65
VPS1YKR001C MSN2P33748 704 aa4.72□□□□□ -1.65
VPS1YKR001C MRPS5P33759 307 aa4.72□□□□□ -1.65
VPS1YKR001C YKR070WP36151 352 aaKnown RBP4.72□□□□□ -1.65
VPS1YKR001C PEX22P39718 180 aa4.72□□□□□ -1.65
VPS1YKR001C YEA4P40004 342 aa4.72□□□□□ -1.65
VPS1YKR001C YER079WP40052 210 aaKnown RBP4.72□□□□□ -1.65
VPS1YKR001C NAT3Q06504 195 aa4.72□□□□□ -1.65
VPS1YKR001C TIR4Q12218 487 aaPredicted RBP4.72□□□□□ -1.65
VPS1YKR001C BOL1Q3E793 110 aa4.72□□□□□ -1.65
VPS1YKR001C RAD6P06104 172 aa4.71□□□□□ -1.66
VPS1YKR001C MRPL20P22354 195 aaPredicted RBP4.71□□□□□ -1.66
VPS1YKR001C NNK1P36003 928 aa4.71□□□□□ -1.66
VPS1YKR001C ECM14P38836 430 aa4.71□□□□□ -1.66
VPS1YKR001C CAT5P41735 233 aa4.71□□□□□ -1.66
VPS1YKR001C SFT1P43682 97 aa4.71□□□□□ -1.66
VPS1YKR001C YGL260WP53056 76 aa4.71□□□□□ -1.66
VPS1YKR001C NCE103P53615 221 aa4.71□□□□□ -1.66
VPS1YKR001C DUG3P53871 357 aa4.71□□□□□ -1.66
VPS1YKR001C ELP4Q02884 456 aaKnown RBP4.71□□□□□ -1.66
VPS1YKR001C ADH1P00330 348 aaKnown RBP4.7□□□□□ -1.66
VPS1YKR001C COX1P00401 534 aa4.7□□□□□ -1.66
VPS1YKR001C CPA1P07258 411 aaKnown RBP4.7□□□□□ -1.66
VPS1YKR001C CDC43P18898 376 aa4.7□□□□□ -1.66
VPS1YKR001C EMC3P36039 253 aa4.7□□□□□ -1.66
VPS1YKR001C TES1P41903 349 aaKnown RBP4.7□□□□□ -1.66
VPS1YKR001C EGT2P42835 1041 aa4.7□□□□□ -1.66
VPS1YKR001C YFR045WP43617 309 aa4.7□□□□□ -1.66
VPS1YKR001C CTK2P46962 323 aa4.7□□□□□ -1.66
VPS1YKR001C YDR209CQ03480 137 aa4.7□□□□□ -1.66
VPS1YKR001C YPR174CQ06616 221 aaPredicted RBP4.7□□□□□ -1.66
VPS1YKR001C URA10P30402 227 aa4.7□□□□□ -1.66
VPS1YKR001C ATS1P31386 333 aa4.7□□□□□ -1.66
VPS1YKR001C FMP46P36141 133 aaKnown RBP4.7□□□□□ -1.66
VPS1YKR001C MSL1P40567 111 aaPredicted RBP4.7□□□□□ -1.66
VPS1YKR001C YGR039WP53225 103 aa4.7□□□□□ -1.66
VPS1YKR001C CAB4P53332 305 aa4.7□□□□□ -1.66
VPS1YKR001C TEX1P53851 422 aaKnown RBP4.7□□□□□ -1.66
VPS1YKR001C BET5Q03630 159 aa4.7□□□□□ -1.66
VPS1YKR001C YMR082CQ04276 118 aa4.7□□□□□ -1.66
VPS1YKR001C RLM1Q12224 676 aa4.7□□□□□ -1.66
VPS1YKR001C ICT1Q12385 394 aa4.7□□□□□ -1.66
VPS1YKR001C YLR412C-AQ3E742 68 aa4.7□□□□□ -1.66
VPS1YKR001C YNL277W-AQ3E7Z0 62 aa4.7□□□□□ -1.66
VPS1YKR001C GAS1P22146 559 aaKnown RBP4.69□□□□□ -1.66
VPS1YKR001C ECM33P38248 429 aaKnown RBP4.69□□□□□ -1.66
VPS1YKR001C PCL5P38794 229 aa4.69□□□□□ -1.66
VPS1YKR001C ISC1P40015 477 aaKnown RBP4.69□□□□□ -1.66
VPS1YKR001C CCS1P40202 249 aaKnown RBP4.69□□□□□ -1.66
VPS1YKR001C PAU15P40585 124 aa4.69□□□□□ -1.66
VPS1YKR001C GAS3Q03655 524 aa4.69□□□□□ -1.66
VPS1YKR001C VBA1Q04301 562 aa4.69□□□□□ -1.66
VPS1YKR001C UTP15Q04305 513 aaKnown RBP4.69□□□□□ -1.66
VPS1YKR001C HEM25Q07534 307 aa4.69□□□□□ -1.66
VPS1YKR001C HRT1Q08273 121 aa4.69□□□□□ -1.66
VPS1YKR001C YDR215CQ12240 137 aa4.69□□□□□ -1.66
VPS1YKR001C OPI3P05375 206 aa4.69□□□□□ -1.66
VPS1YKR001C VAC17P25591 423 aa4.69□□□□□ -1.66
VPS1YKR001C POP5P28005 173 aa4.69□□□□□ -1.66
VPS1YKR001C VMA11P32842 164 aa4.69□□□□□ -1.66
VPS1YKR001C VRP1P37370 817 aa4.69□□□□□ -1.66
VPS1YKR001C ARP3P47117 449 aaKnown RBP4.69□□□□□ -1.66
VPS1YKR001C AVO2Q04749 426 aa4.69□□□□□ -1.66
VPS1YKR001C ANT1Q06497 328 aa4.69□□□□□ -1.66
VPS1YKR001C YGK3Q12222 375 aaPredicted RBP4.69□□□□□ -1.66
VPS1YKR001C AIR2Q12476 344 aaKnown RBP4.69□□□□□ -1.66
VPS1YKR001C MDM35O60200 86 aa4.68□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 220.4 ms