RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W USV1Q12132 391 aa7.9□□□□□ -1.14
UBA4YHR111W CYC3P06182 269 aa7.89□□□□□ -1.15
UBA4YHR111W QDR3P38227 689 aa7.89□□□□□ -1.15
UBA4YHR111W PNC1P53184 216 aaKnown RBP7.89□□□□□ -1.15
UBA4YHR111W CAX4P53223 239 aa7.89□□□□□ -1.15
UBA4YHR111W DID2P69771 204 aa7.89□□□□□ -1.15
UBA4YHR111W RPS25BP0C0T4 108 aaKnown RBP7.88□□□□□ -1.15
UBA4YHR111W MDM10P18409 493 aa7.88□□□□□ -1.15
UBA4YHR111W ALK2P32789 676 aaPredicted RBP7.88□□□□□ -1.15
UBA4YHR111W BDH1P39714 382 aa7.88□□□□□ -1.15
UBA4YHR111W YGR018CP53211 109 aa7.88□□□□□ -1.15
UBA4YHR111W YMR082CQ04276 118 aa7.88□□□□□ -1.15
UBA4YHR111W RPS25AQ3E792 108 aaPredicted RBP7.88□□□□□ -1.15
UBA4YHR111W YHR213W-AQ8TGT4 77 aa7.88□□□□□ -1.15
UBA4YHR111W COX2P00410 251 aa7.87□□□□□ -1.15
UBA4YHR111W YCR022CP25620 114 aa7.87□□□□□ -1.15
UBA4YHR111W FPR2P32472 135 aa7.87□□□□□ -1.15
UBA4YHR111W AVT5P38176 459 aa7.87□□□□□ -1.15
UBA4YHR111W ECM27P47144 725 aa7.87□□□□□ -1.15
UBA4YHR111W YJR111CP47148 283 aaKnown RBP7.87□□□□□ -1.15
UBA4YHR111W BUL1P48524 976 aa7.87□□□□□ -1.15
UBA4YHR111W GRH1Q04410 372 aaKnown RBP7.87□□□□□ -1.15
UBA4YHR111W TDA6Q06466 467 aa7.87□□□□□ -1.15
UBA4YHR111W POS5Q06892 414 aa7.87□□□□□ -1.15
UBA4YHR111W TIM18Q08749 192 aa7.87□□□□□ -1.15
UBA4YHR111W PIS1P06197 220 aaKnown RBP7.86□□□□□ -1.15
UBA4YHR111W CSH1P38287 376 aa7.86□□□□□ -1.15
UBA4YHR111W MPC2P38857 129 aa7.86□□□□□ -1.15
UBA4YHR111W BOL3P39724 118 aa7.86□□□□□ -1.15
UBA4YHR111W SNU13P39990 126 aaKnown RBP7.86□□□□□ -1.15
UBA4YHR111W AGX1P43567 385 aa7.86□□□□□ -1.15
UBA4YHR111W ERV25P54837 211 aaKnown RBP7.86□□□□□ -1.15
UBA4YHR111W YPR013CQ12145 317 aa7.86□□□□□ -1.15
UBA4YHR111W AGC1Q12482 902 aa7.86□□□□□ -1.15
UBA4YHR111W YCR025CP25352 136 aa7.85□□□□□ -1.15
UBA4YHR111W SDH4P37298 181 aa7.85□□□□□ -1.15
UBA4YHR111W ECM33P38248 429 aaKnown RBP7.85□□□□□ -1.15
UBA4YHR111W POR2P40478 281 aa7.85□□□□□ -1.15
UBA4YHR111W YJR015WP47090 510 aa7.85□□□□□ -1.15
UBA4YHR111W LST7P53237 242 aa7.85□□□□□ -1.15
UBA4YHR111W YLR281CQ05863 155 aa7.85□□□□□ -1.15
UBA4YHR111W POM34Q12445 299 aa7.85□□□□□ -1.15
UBA4YHR111W MDN1Q12019 4910 aaKnown RBP7.84□□□□□ -1.15
UBA4YHR111W TY1A-DR4O74302 440 aa7.84□□□□□ -1.15
UBA4YHR111W TY1A-HP0C2I4 478 aaKnown RBP7.84□□□□□ -1.15
UBA4YHR111W TY1A-AP0CX57 440 aa7.84□□□□□ -1.15
UBA4YHR111W TY1A-PR1P0CX58 440 aa7.84□□□□□ -1.15
UBA4YHR111W TY1A-ORP0CX59 440 aa7.84□□□□□ -1.15
UBA4YHR111W TY1A-PR2P0CX60 440 aa7.84□□□□□ -1.15
UBA4YHR111W TY1A-DR5P0CX65 440 aa7.84□□□□□ -1.15
UBA4YHR111W TY1A-ER2P0CX66 440 aa7.84□□□□□ -1.15
UBA4YHR111W TY1A-GR3P0CX67 440 aa7.84□□□□□ -1.15
UBA4YHR111W TY1A-LR1P0CX68 440 aa7.84□□□□□ -1.15
UBA4YHR111W TY1A-MR2P0CX69 440 aa7.84□□□□□ -1.15
UBA4YHR111W POP5P28005 173 aa7.84□□□□□ -1.15
UBA4YHR111W YER137CP40083 148 aaKnown RBP7.84□□□□□ -1.15
UBA4YHR111W YGR269WP40326 108 aa7.84□□□□□ -1.15
UBA4YHR111W YJL027CP47063 138 aaPredicted RBP7.84□□□□□ -1.15
UBA4YHR111W TY1A-JR2P47099 440 aa7.84□□□□□ -1.15
UBA4YHR111W TY1A-DR1Q03856 440 aa7.84□□□□□ -1.15
UBA4YHR111W TY1A-ML1Q04706 440 aaKnown RBP7.84□□□□□ -1.15
UBA4YHR111W ATG39Q06159 398 aa7.84□□□□□ -1.15
UBA4YHR111W TY1A-BRQ12217 440 aa7.84□□□□□ -1.15
UBA4YHR111W PRR2Q12310 699 aa7.84□□□□□ -1.15
UBA4YHR111W TY1A-NL2Q12470 440 aa7.84□□□□□ -1.15
UBA4YHR111W TY1A-GR2Q12485 440 aa7.84□□□□□ -1.15
UBA4YHR111W TAR1Q8TGM6 124 aa7.84□□□□□ -1.15
UBA4YHR111W UPS2P35200 230 aa7.83□□□□□ -1.16
UBA4YHR111W RTS2P40962 232 aa7.83□□□□□ -1.16
UBA4YHR111W YDR274CP87283 123 aa7.83□□□□□ -1.16
UBA4YHR111W RRG8Q06109 277 aa7.83□□□□□ -1.16
UBA4YHR111W BER1Q06688 274 aaKnown RBP7.83□□□□□ -1.16
UBA4YHR111W RPS8AP0CX39 200 aaKnown RBP7.82□□□□□ -1.16
UBA4YHR111W RPS8BP0CX40 200 aaKnown RBP7.82□□□□□ -1.16
UBA4YHR111W YEA4P40004 342 aa7.82□□□□□ -1.16
UBA4YHR111W SWM2P40342 146 aa7.82□□□□□ -1.16
UBA4YHR111W SDH7Q04401 133 aa7.82□□□□□ -1.16
UBA4YHR111W MSC3Q05812 728 aa7.82□□□□□ -1.16
UBA4YHR111W YMR316C-AI2HB70 103 aa7.81□□□□□ -1.16
UBA4YHR111W CDC7P06243 507 aa7.81□□□□□ -1.16
UBA4YHR111W GET2P40056 285 aa7.81□□□□□ -1.16
UBA4YHR111W BOR1P53838 576 aa7.81□□□□□ -1.16
UBA4YHR111W OCA2P53949 197 aa7.81□□□□□ -1.16
UBA4YHR111W TRI1Q05024 226 aa7.81□□□□□ -1.16
UBA4YHR111W LDS2Q08218 356 aa7.81□□□□□ -1.16
UBA4YHR111W FCF2Q12035 217 aaPredicted RBP7.81□□□□□ -1.16
UBA4YHR111W YDR157WA0A023PZE8 133 aa7.8□□□□□ -1.16
UBA4YHR111W YHR213WP0CI67 198 aa7.8□□□□□ -1.16
UBA4YHR111W MAG1P22134 296 aaKnown RBP7.8□□□□□ -1.16
UBA4YHR111W CAF16P43569 289 aa7.8□□□□□ -1.16
UBA4YHR111W MIC27P50945 234 aa7.8□□□□□ -1.16
UBA4YHR111W YGL117WP53133 265 aa7.8□□□□□ -1.16
UBA4YHR111W ODC1Q03028 310 aa7.8□□□□□ -1.16
UBA4YHR111W YLR179CQ06252 201 aaKnown RBP7.8□□□□□ -1.16
UBA4YHR111W ARR3Q06598 404 aa7.8□□□□□ -1.16
UBA4YHR111W DFR1P07807 211 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
UBA4YHR111W SNF11P38956 169 aa7.79□□□□□ -1.16
UBA4YHR111W MST28P39552 234 aa7.79□□□□□ -1.16
UBA4YHR111W TAD2P47058 250 aa7.79□□□□□ -1.16
UBA4YHR111W HAM1P47119 197 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms