RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C DAD3P69850 94 aa5.45□□□□□ -1.54
YPT1YFL038C APS2Q00381 147 aa5.45□□□□□ -1.54
YPT1YFL038C YMR007WQ03675 126 aa5.45□□□□□ -1.54
YPT1YFL038C LPP1Q04396 274 aa5.45□□□□□ -1.54
YPT1YFL038C ECM18Q04623 453 aa5.45□□□□□ -1.54
YPT1YFL038C FRQ1Q06389 190 aa5.45□□□□□ -1.54
YPT1YFL038C STP4Q07351 490 aa5.45□□□□□ -1.54
YPT1YFL038C RFM1Q12192 310 aa5.45□□□□□ -1.54
YPT1YFL038C POC4Q12245 148 aaPredicted RBP5.45□□□□□ -1.54
YPT1YFL038C LAS17Q12446 633 aa5.45□□□□□ -1.54
YPT1YFL038C FOL3Q12676 427 aaPredicted RBP5.45□□□□□ -1.54
YPT1YFL038C FMP49A0A023PZB3 126 aa5.44□□□□□ -1.54
YPT1YFL038C TY1A-HP0C2I4 478 aaKnown RBP5.44□□□□□ -1.54
YPT1YFL038C BGL2P15703 313 aaKnown RBP5.44□□□□□ -1.54
YPT1YFL038C PRE9P23638 258 aaKnown RBP5.44□□□□□ -1.54
YPT1YFL038C PTC7P38797 343 aa5.44□□□□□ -1.54
YPT1YFL038C CYB5P40312 120 aa5.44□□□□□ -1.54
YPT1YFL038C GPI2P46961 280 aa5.44□□□□□ -1.54
YPT1YFL038C ACS1Q01574 713 aa5.44□□□□□ -1.54
YPT1YFL038C ATC1Q04005 294 aa5.44□□□□□ -1.54
YPT1YFL038C YOL024WQ08172 172 aa5.44□□□□□ -1.54
YPT1YFL038C RNH203Q12338 110 aa5.44□□□□□ -1.54
YPT1YFL038C POM34Q12445 299 aa5.44□□□□□ -1.54
YPT1YFL038C COA6Q3E846 104 aa5.44□□□□□ -1.54
YPT1YFL038C RPL9AP05738 191 aaKnown RBP5.43□□□□□ -1.54
YPT1YFL038C FPR2P32472 135 aa5.43□□□□□ -1.54
YPT1YFL038C DER1P38307 211 aa5.43□□□□□ -1.54
YPT1YFL038C NSA2P40078 261 aaKnown RBP5.43□□□□□ -1.54
YPT1YFL038C DFG10P40526 253 aa5.43□□□□□ -1.54
YPT1YFL038C YJL118WP47022 219 aa5.43□□□□□ -1.54
YPT1YFL038C YJR015WP47090 510 aa5.43□□□□□ -1.54
YPT1YFL038C MIC27P50945 234 aa5.43□□□□□ -1.54
YPT1YFL038C DYN2Q02647 92 aa5.43□□□□□ -1.54
YPT1YFL038C RPL21AQ02753 160 aaKnown RBP5.43□□□□□ -1.54
YPT1YFL038C API2Q04413 109 aa5.43□□□□□ -1.54
YPT1YFL038C YPR071WQ12346 211 aa5.43□□□□□ -1.54
YPT1YFL038C RPL21BQ12672 160 aaKnown RBP5.43□□□□□ -1.54
YPT1YFL038C TRP4P07285 380 aaPredicted RBP5.42□□□□□ -1.54
YPT1YFL038C TOM40P23644 387 aaKnown RBP5.42□□□□□ -1.54
YPT1YFL038C RNA15P25299 296 aaPredicted RBP5.42□□□□□ -1.54
YPT1YFL038C MIA40P36046 403 aa5.42□□□□□ -1.54
YPT1YFL038C RPL9BP51401 191 aaKnown RBP5.42□□□□□ -1.54
YPT1YFL038C SHH3Q04487 196 aa5.42□□□□□ -1.54
YPT1YFL038C GAT3Q07928 141 aa5.42□□□□□ -1.54
YPT1YFL038C LDS2Q08218 356 aa5.42□□□□□ -1.54
YPT1YFL038C YOR352WQ08816 343 aa5.42□□□□□ -1.54
YPT1YFL038C PAA1Q12447 191 aaKnown RBP5.42□□□□□ -1.54
YPT1YFL038C TMA17Q12513 150 aa5.42□□□□□ -1.54
YPT1YFL038C RPS23AP0CX29 145 aaKnown RBP5.41□□□□□ -1.54
YPT1YFL038C RPS23BP0CX30 145 aa5.41□□□□□ -1.54
YPT1YFL038C MRS3P10566 314 aa5.41□□□□□ -1.54
YPT1YFL038C HMX1P32339 317 aa5.41□□□□□ -1.54
YPT1YFL038C SRP21P32342 167 aa5.41□□□□□ -1.54
YPT1YFL038C RPS0AP32905 252 aaKnown RBP5.41□□□□□ -1.54
YPT1YFL038C YKL075CP36083 450 aa5.41□□□□□ -1.54
YPT1YFL038C SAP30P38429 201 aa5.41□□□□□ -1.54
YPT1YFL038C YHL037CP38733 133 aa5.41□□□□□ -1.54
YPT1YFL038C SAS2P40963 338 aa5.41□□□□□ -1.54
YPT1YFL038C HIT1P46973 164 aa5.41□□□□□ -1.54
YPT1YFL038C YGR149WP48236 432 aa5.41□□□□□ -1.54
YPT1YFL038C OCA2P53949 197 aa5.41□□□□□ -1.54
YPT1YFL038C YDR114CQ04597 100 aa5.41□□□□□ -1.54
YPT1YFL038C SEN15Q04675 128 aa5.41□□□□□ -1.54
YPT1YFL038C LOA1Q06508 300 aa5.41□□□□□ -1.54
YPT1YFL038C MCH1Q07376 486 aa5.41□□□□□ -1.54
YPT1YFL038C DCN1Q12395 269 aa5.41□□□□□ -1.54
YPT1YFL038C YOS1Q3E834 85 aa5.41□□□□□ -1.54
YPT1YFL038C YNR034W-AQ3E841 98 aa5.41□□□□□ -1.54
YPT1YFL038C SCM4P32564 187 aa5.4□□□□□ -1.54
YPT1YFL038C YBR184WP38299 523 aa5.4□□□□□ -1.54
YPT1YFL038C YAR068WP39564 161 aa5.4□□□□□ -1.54
YPT1YFL038C PIC2P40035 300 aa5.4□□□□□ -1.54
YPT1YFL038C SSU72P53538 206 aaPredicted RBP5.4□□□□□ -1.54
YPT1YFL038C ERF2Q06551 359 aa5.4□□□□□ -1.54
YPT1YFL038C IRA1P18963 3092 aa5.39□□□□□ -1.55
YPT1YFL038C NOP1P15646 327 aaKnown RBP5.39□□□□□ -1.55
YPT1YFL038C ATP10P18496 279 aa5.39□□□□□ -1.55
YPT1YFL038C MRPL44P19956 98 aa5.39□□□□□ -1.55
YPT1YFL038C YGL010WP25338 174 aa5.39□□□□□ -1.55
YPT1YFL038C SOR1P35497 357 aaKnown RBP5.39□□□□□ -1.55
YPT1YFL038C ICS2P38284 255 aa5.39□□□□□ -1.55
YPT1YFL038C YBR220CP38318 560 aa5.39□□□□□ -1.55
YPT1YFL038C YFL051CP43552 160 aa5.39□□□□□ -1.55
YPT1YFL038C PIR5P46999 287 aa5.39□□□□□ -1.55
YPT1YFL038C OST3P48439 350 aa5.39□□□□□ -1.55
YPT1YFL038C DSK2P48510 373 aa5.39□□□□□ -1.55
YPT1YFL038C CPD1P53314 239 aa5.39□□□□□ -1.55
YPT1YFL038C CRZ1P53968 678 aa5.39□□□□□ -1.55
YPT1YFL038C NAT3Q06504 195 aa5.39□□□□□ -1.55
YPT1YFL038C MRL1Q06815 381 aa5.39□□□□□ -1.55
YPT1YFL038C POS5Q06892 414 aa5.39□□□□□ -1.55
YPT1YFL038C SOR2Q07786 357 aa5.39□□□□□ -1.55
YPT1YFL038C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
YPT1YFL038C SMT3Q12306 101 aaKnown RBP5.39□□□□□ -1.55
YPT1YFL038C YMR105W-AQ8TGS8 64 aa5.39□□□□□ -1.55
YPT1YFL038C SEN1Q00416 2231 aaKnown RBP5.38□□□□□ -1.55
YPT1YFL038C RPI1P23250 407 aaKnown RBP5.38□□□□□ -1.55
YPT1YFL038C SUA7P29055 345 aaPredicted RBP5.38□□□□□ -1.55
YPT1YFL038C RAD23P32628 398 aaKnown RBP5.38□□□□□ -1.55
YPT1YFL038C SRP14P38985 146 aa5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms