RNA–Protein interactions for RNA: YDR189W

SLY1, Transcript of Hydrophilic protein involved in ER/Golgi vesicle trafficking, yeast

Gene SLY1, Length 2,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLY1	YDR189W	YFL019C	P43576	117 aa		0.55	□□□□□ -2.32
SLY1	YDR189W	YFH7	P43591	353 aa		0.55	□□□□□ -2.32
SLY1	YDR189W	TDA4	P47153	279 aa		0.55	□□□□□ -2.32
SLY1	YDR189W	RPL37A	P49166	88 aa	Known RBP	0.55	□□□□□ -2.32
SLY1	YDR189W	YNL247W	P53852	767 aa	Known RBP	0.55	□□□□□ -2.32
SLY1	YDR189W	DIG2	Q03373	323 aa	Known RBP	0.55	□□□□□ -2.32
SLY1	YDR189W	VPS71	Q03433	280 aa		0.55	□□□□□ -2.32
SLY1	YDR189W	AIM34	Q03673	198 aa		0.55	□□□□□ -2.32
SLY1	YDR189W	GRX8	Q05926	109 aa		0.55	□□□□□ -2.32
SLY1	YDR189W	FYV12	Q08559	129 aa		0.55	□□□□□ -2.32
SLY1	YDR189W	FIT2	Q08906	153 aa		0.55	□□□□□ -2.32
SLY1	YDR189W	RPS24A	P0CX31	135 aa	Known RBP	0.54	□□□□□ -2.32
SLY1	YDR189W	RPS24B	P0CX32	135 aa	Known RBP	0.54	□□□□□ -2.32
SLY1	YDR189W	YHR212W-A	P0CX91	67 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	IDP1	P21954	428 aa	Known RBP	0.54	□□□□□ -2.32
SLY1	YDR189W	SOK1	P40317	901 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	GPI14	P47088	403 aa	Known RBP	0.54	□□□□□ -2.32
SLY1	YDR189W	TMA22	P47089	198 aa	Predicted RBP	0.54	□□□□□ -2.32
SLY1	YDR189W	SBH1	P52870	82 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	HOP2	P53187	214 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	NRK1	P53915	240 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	YNL033W	P53964	284 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	DAD4	P69851	72 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	CWC27	Q02770	301 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	YMR315W	Q04869	349 aa	Known RBP	0.54	□□□□□ -2.32
SLY1	YDR189W	BRX1	Q08235	291 aa	Known RBP	0.54	□□□□□ -2.32
SLY1	YDR189W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.54	□□□□□ -2.32
SLY1	YDR189W	BUD4	P47136	1447 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	POL1	P13382	1468 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	YCL042W	P25572	119 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	GSP2	P32836	220 aa	Known RBP	0.54	□□□□□ -2.32
SLY1	YDR189W	SHG1	P38337	142 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	YHL042W	P38729	150 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	SPC25	P40014	221 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	YFL065C	P43539	102 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	GIM3	P53900	129 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	SNO1	Q03144	224 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	YOR342C	Q12182	319 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	YPR014C	Q6B0W2	109 aa		0.54	□□□□□ -2.32
SLY1	YDR189W	CAT8	P39113	1433 aa		0.53	□□□□□ -2.32
SLY1	YDR189W	PHO85	P17157	305 aa		0.53	□□□□□ -2.32
SLY1	YDR189W	ARO7	P32178	256 aa		0.53	□□□□□ -2.32
SLY1	YDR189W	RPB7	P34087	171 aa		0.53	□□□□□ -2.32
SLY1	YDR189W	SFK1	P35735	353 aa		0.53	□□□□□ -2.32
SLY1	YDR189W	FMP23	P38231	175 aa		0.53	□□□□□ -2.32
SLY1	YDR189W	THG1	P53215	237 aa	Known RBP	0.53	□□□□□ -2.32
SLY1	YDR189W	PGA1	P53896	198 aa		0.53	□□□□□ -2.32
SLY1	YDR189W	UPS3	Q04006	179 aa		0.53	□□□□□ -2.32
SLY1	YDR189W	YMR252C	Q04814	134 aa		0.53	□□□□□ -2.32
SLY1	YDR189W	SHH4	Q06236	168 aa		0.53	□□□□□ -2.32
SLY1	YDR189W	GRE1	Q08969	168 aa		0.53	□□□□□ -2.32
SLY1	YDR189W	PST2	Q12335	198 aa	Known RBP	0.53	□□□□□ -2.32
SLY1	YDR189W	TOR2	P32600	2474 aa	Known RBP	0.53	□□□□□ -2.32
SLY1	YDR189W	TY1B-DR4	Q07793	1604 aa		0.53	□□□□□ -2.32
SLY1	YDR189W	AHC2	P25649	128 aa		0.52	□□□□□ -2.33
SLY1	YDR189W	ATP7	P30902	174 aa		0.52	□□□□□ -2.33
SLY1	YDR189W	NSG1	P38837	291 aa		0.52	□□□□□ -2.33
SLY1	YDR189W	HPA3	P39979	161 aa		0.52	□□□□□ -2.33
SLY1	YDR189W	FMP32	P43557	207 aa		0.52	□□□□□ -2.33
SLY1	YDR189W	MPD1	Q12404	318 aa	Known RBP	0.52	□□□□□ -2.33
SLY1	YDR189W	ECM5	Q03214	1411 aa		0.52	□□□□□ -2.33
SLY1	YDR189W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.52	□□□□□ -2.33	not detected
SLY1	YDR189W	STP22	P25604	385 aa		0.52	□□□□□ -2.33
SLY1	YDR189W	YKL102C	P34249	101 aa		0.52	□□□□□ -2.33
SLY1	YDR189W	YKR041W	P36134	250 aa		0.52	□□□□□ -2.33
SLY1	YDR189W	NSA2	P40078	261 aa	Known RBP	0.52	□□□□□ -2.33
SLY1	YDR189W	HUA1	P40325	198 aa		0.52	□□□□□ -2.33
SLY1	YDR189W	ALB1	P47019	175 aa	Predicted RBP	0.52	□□□□□ -2.33
SLY1	YDR189W	PIR1	Q03178	341 aa		0.52	□□□□□ -2.33
SLY1	YDR189W	ATP20	Q12233	115 aa		0.52	□□□□□ -2.33
SLY1	YDR189W	DGK1	Q12382	290 aa		0.52	□□□□□ -2.33
SLY1	YDR189W	YLR412C-A	Q3E742	68 aa		0.52	□□□□□ -2.33
SLY1	YDR189W	DUR1,2	P32528	1835 aa	Known RBP	0.51	□□□□□ -2.33
SLY1	YDR189W	YLR460C	P54007	376 aa		0.51	□□□□□ -2.33
SLY1	YDR189W	RRP17	Q04031	235 aa	Predicted RBP	0.51	□□□□□ -2.33
SLY1	YDR189W	YET3	Q07451	203 aa		0.51	□□□□□ -2.33
SLY1	YDR189W	TAO3	P40468	2376 aa		0.51	□□□□□ -2.33
SLY1	YDR189W	RKR1	Q04781	1562 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	ULS1	Q08562	1619 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	SEC14	P24280	304 aa	Known RBP	0.5	□□□□□ -2.33
SLY1	YDR189W	YCR023C	P25351	611 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	CPR5	P35176	225 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	NVJ1	P38881	321 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	SEC72	P39742	193 aa	Known RBP	0.5	□□□□□ -2.33
SLY1	YDR189W	RFC2	P40348	353 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	MET31	Q03081	177 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	YMR007W	Q03675	126 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	GPI17	Q04080	534 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	GAL83	Q04739	417 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	DAS2	Q12084	232 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	COA3	Q3E7B2	85 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	CHC1	P22137	1653 aa	Known RBP	0.5	□□□□□ -2.33
SLY1	YDR189W	SNT2	P53127	1403 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	SEN2	P16658	377 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	STF2	P16965	84 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	RRT1	P38192	103 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	POG1	P40473	351 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	YGL235W	P53071	178 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	VPS28	Q02767	242 aa		0.5	□□□□□ -2.33
SLY1	YDR189W	YOR015W	Q12169	119 aa		0.5	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms