RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC18	YBR080C	NAT3	Q06504	195 aa		4.6	□□□□□ -1.67
SEC18	YBR080C	MCP1	Q12106	302 aa		4.6	□□□□□ -1.67
SEC18	YBR080C	YOR214C	Q12282	236 aa		4.6	□□□□□ -1.67
SEC18	YBR080C	SNC2	P33328	115 aa		4.6	□□□□□ -1.67
SEC18	YBR080C	YHR140W	P38842	239 aa		4.6	□□□□□ -1.67
SEC18	YBR080C	YJL028W	P47062	111 aa		4.6	□□□□□ -1.67
SEC18	YBR080C	FMP42	Q04991	504 aa		4.6	□□□□□ -1.67
SEC18	YBR080C	ATG39	Q06159	398 aa		4.6	□□□□□ -1.67
SEC18	YBR080C	CRC1	Q12289	327 aa		4.6	□□□□□ -1.67
SEC18	YBR080C	YER039C-A	P0CD97	72 aa		4.59	□□□□□ -1.67
SEC18	YBR080C	RPB3	P16370	318 aa	Known RBP	4.59	□□□□□ -1.67
SEC18	YBR080C	ERG2	P32352	222 aa		4.59	□□□□□ -1.67
SEC18	YBR080C	AIM36	Q03798	255 aa		4.59	□□□□□ -1.67
SEC18	YBR080C	YDR415C	Q04033	374 aa	Predicted RBP	4.59	□□□□□ -1.67
SEC18	YBR080C	KRE5	P22023	1365 aa		4.59	□□□□□ -1.67
SEC18	YBR080C	PDR11	P40550	1411 aa		4.59	□□□□□ -1.67
SEC18	YBR080C	NSP1	P14907	823 aa	Known RBP	4.58	□□□□□ -1.68
SEC18	YBR080C	YBR242W	P38331	238 aa		4.58	□□□□□ -1.68
SEC18	YBR080C	FYV4	P38783	130 aa	Predicted RBP	4.58	□□□□□ -1.68
SEC18	YBR080C	YFL019C	P43576	117 aa		4.58	□□□□□ -1.68
SEC18	YBR080C	SWT21	P53873	357 aa	Predicted RBP	4.58	□□□□□ -1.68
SEC18	YBR080C	SHB17	P36136	271 aa	Known RBP	4.58	□□□□□ -1.68
SEC18	YBR080C	ETR1	P38071	380 aa		4.58	□□□□□ -1.68
SEC18	YBR080C	MOH1	P38191	138 aa		4.58	□□□□□ -1.68
SEC18	YBR080C	YPL247C	Q12523	523 aa		4.58	□□□□□ -1.68
SEC18	YBR080C	HAP1	P0CE41	1502 aa		4.58	□□□□□ -1.68
SEC18	YBR080C	SNF2	P22082	1703 aa		4.58	□□□□□ -1.68
SEC18	YBR080C	ATP15	P21306	62 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	SNM1	P40993	198 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	PGU1	P47180	361 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	CLD1	P53264	445 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	YLR042C	Q07990	161 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	NAG1	Q8TGN9	163 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	HTL1	Q9URQ5	78 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	YLR462W	O13556	202 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	VAR1	P02381	398 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	ATP5	P09457	212 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	CPR1	P14832	162 aa	Known RBP	4.57	□□□□□ -1.68
SEC18	YBR080C	CDC43	P18898	376 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	YEL075C	P39972	122 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	SNO3	P43544	222 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	YGL262W	P53054	175 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	ECM19	Q06011	112 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	YDL211C	Q12121	372 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	SPC3	Q12133	184 aa		4.57	□□□□□ -1.68
SEC18	YBR080C	MLP1	Q02455	1875 aa	Known RBP	4.57	□□□□□ -1.68
SEC18	YBR080C	TIR1	P10863	254 aa		4.56	□□□□□ -1.68
SEC18	YBR080C	HYR1	P40581	163 aa	Known RBP	4.56	□□□□□ -1.68
SEC18	YBR080C	STB1	P42845	420 aa		4.56	□□□□□ -1.68
SEC18	YBR080C	ALG9	P53868	555 aa	Known RBP	4.56	□□□□□ -1.68
SEC18	YBR080C	YMR253C	Q04835	414 aa		4.56	□□□□□ -1.68
SEC18	YBR080C	RPO21	P04050	1733 aa	Known RBP	4.56	□□□□□ -1.68
SEC18	YBR080C	BNR1	P40450	1375 aa		4.56	□□□□□ -1.68
SEC18	YBR080C	YIL177C	P40434	1758 aa		4.56	□□□□□ -1.68
SEC18	YBR080C	YJL225C	P40889	1758 aa		4.56	□□□□□ -1.68
SEC18	YBR080C	REP2	P03872	296 aa		4.56	□□□□□ -1.68
SEC18	YBR080C	PHO89	P38361	574 aa		4.56	□□□□□ -1.68
SEC18	YBR080C	AVT6	P40074	448 aa		4.56	□□□□□ -1.68
SEC18	YBR080C	YIL152W	P40455	235 aa		4.56	□□□□□ -1.68
SEC18	YBR080C	APJ1	P53940	528 aa		4.56	□□□□□ -1.68
SEC18	YBR080C	YER078W-A	Q3E7A2	54 aa		4.56	□□□□□ -1.68
SEC18	YBR080C	NTE1	Q04958	1679 aa		4.56	□□□□□ -1.68
SEC18	YBR080C	VTC1	P40046	129 aa	RIP-Chip data	4.55	□□□□□ -1.68	not detected
SEC18	YBR080C	YNL033W	P53964	284 aa		4.55	□□□□□ -1.68
SEC18	YBR080C	YNL019C	P53975	284 aa		4.55	□□□□□ -1.68
SEC18	YBR080C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
SEC18	YBR080C	YNL277W-A	Q3E7Z0	62 aa		4.55	□□□□□ -1.68
SEC18	YBR080C	YPR014C	Q6B0W2	109 aa		4.55	□□□□□ -1.68
SEC18	YBR080C	SPS2	P08459	502 aa		4.55	□□□□□ -1.68
SEC18	YBR080C	RPB9	P27999	122 aa		4.55	□□□□□ -1.68
SEC18	YBR080C	YND1	P40009	630 aa		4.55	□□□□□ -1.68
SEC18	YBR080C	YNL208W	P40159	199 aa	Known RBP	4.55	□□□□□ -1.68
SEC18	YBR080C	BUD25	P85052	153 aa		4.55	□□□□□ -1.68
SEC18	YBR080C	YPR114W	Q06107	315 aa		4.55	□□□□□ -1.68
SEC18	YBR080C	ROM2	P51862	1356 aa	Known RBP	4.54	□□□□□ -1.68
SEC18	YBR080C	YAE1	P47118	141 aa	Predicted RBP	4.54	□□□□□ -1.68
SEC18	YBR080C	SMT3	Q12306	101 aa	Known RBP	4.54	□□□□□ -1.68
SEC18	YBR080C	RPL21B	Q12672	160 aa	Known RBP	4.54	□□□□□ -1.68
SEC18	YBR080C	CHC1	P22137	1653 aa	Known RBP	4.54	□□□□□ -1.68
SEC18	YBR080C	YPR170W-B	P0C5R9	85 aa		4.53	□□□□□ -1.68
SEC18	YBR080C	YLR156W	P0CE96	114 aa		4.53	□□□□□ -1.68
SEC18	YBR080C	YLR159W	P0CE97	114 aa		4.53	□□□□□ -1.68
SEC18	YBR080C	YLR161W	P0CE98	114 aa		4.53	□□□□□ -1.68
SEC18	YBR080C	TOM40	P23644	387 aa	Known RBP	4.53	□□□□□ -1.68
SEC18	YBR080C	SRP21	P32342	167 aa		4.53	□□□□□ -1.68
SEC18	YBR080C	OMA1	P36163	345 aa		4.53	□□□□□ -1.68
SEC18	YBR080C	NSG1	P38837	291 aa		4.53	□□□□□ -1.68
SEC18	YBR080C	PRE5	P40302	234 aa	Known RBP	4.53	□□□□□ -1.68
SEC18	YBR080C	SYS1	P41544	203 aa		4.53	□□□□□ -1.68
SEC18	YBR080C	VPS28	Q02767	242 aa		4.53	□□□□□ -1.68
SEC18	YBR080C	YMR099C	Q03161	297 aa	Known RBP	4.53	□□□□□ -1.68
SEC18	YBR080C	TVP18	Q04767	167 aa		4.53	□□□□□ -1.68
SEC18	YBR080C	SCW10	Q04951	389 aa		4.53	□□□□□ -1.68
SEC18	YBR080C	YTH1	Q06102	208 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC18	YBR080C	OCA6	Q12454	224 aa		4.53	□□□□□ -1.68
SEC18	YBR080C	BUD3	P25558	1636 aa		4.53	□□□□□ -1.68
SEC18	YBR080C	VMR1	P38735	1592 aa		4.53	□□□□□ -1.68
SEC18	YBR080C	DIE2	P50076	525 aa		4.53	□□□□□ -1.68
SEC18	YBR080C	FCY1	Q12178	158 aa		4.53	□□□□□ -1.68
SEC18	YBR080C	IZH2	Q12442	317 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms