RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 ASB7Q9H672 318 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 RPF1Q9H9Y2 349 aaKnown RBP10.98□□□□□ -0.65
PHGDH-224ENST00000641711 TMEM8AQ9HCN3 771 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 SNTG2Q9NY99 539 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 PARP2Q9UGN5 583 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 CPSF3Q9UKF6 684 aaKnown RBP10.98□□□□□ -0.65
PHGDH-224ENST00000641711 YBX2Q9Y2T7 364 aaKnown RBP10.98□□□□□ -0.65
PHGDH-224ENST00000641711 DERAQ9Y315 318 aa10.98□□□□□ -0.65
PHGDH-224ENST00000641711 GRXCR1A8MXD5 290 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 ZNF185O15231 689 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 BUB1O43683 1085 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 EXTL3O43909 919 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 THP07101 528 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 PAX3P23760 479 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 MLH1P40692 756 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 GCLMP48507 274 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 RABGGTBP53611 331 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 CLDN10P78369 228 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 TAP1Q03518 808 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 UBE3AQ05086 875 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 RNASELQ05823 741 aaKnown RBP10.97□□□□□ -0.65
PHGDH-224ENST00000641711 CYP24A1Q07973 514 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 DSC1Q08554 894 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 TCEAL1Q15170 157 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 ENOX2Q16206 610 aaKnown RBP10.97□□□□□ -0.65
PHGDH-224ENST00000641711 LONRF2Q1L5Z9 754 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 BEND6Q5SZJ8 279 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-224ENST00000641711 KRT39Q6A163 491 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 FAM117BQ6P1L5 589 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 ALKAL1Q6UXT8 129 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 THNSL1Q8IYQ7 743 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 GPD1LQ8N335 351 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 LRRC57Q8N9N7 239 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 COG1Q8WTW3 980 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 UBE2Q2Q8WVN8 375 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 LPPQ93052 612 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 ZBTB45Q96K62 511 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-224ENST00000641711 CAPZA3Q96KX2 299 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 UROC1Q96N76 676 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 GAD1Q99259 594 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 C11orf84Q9BUA3 381 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-224ENST00000641711 NKX2-4Q9H2Z4 354 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 TBC1D13Q9NVG8 400 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 C2CD2Q9Y426 696 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 HES2Q9Y543 173 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 PCDHB12Q9Y5F1 795 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 NCANO14594 1321 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 COL4A4P53420 1690 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-224ENST00000641711 LAMA3Q16787 3333 aa10.97□□□□□ -0.65
PHGDH-224ENST00000641711 GOLGA8IPA6NC78 632 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 GOLGA8JA6NMD2 632 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 LRRIQ3A6PVS8 624 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-224ENST00000641711 FOXN3O00409 490 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-224ENST00000641711 MAP2K7O14733 419 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 ZC3H11AO75152 810 aaKnown RBP eCLIP10.96□□□□□ -0.65
PHGDH-224ENST00000641711 RHOXF2BP0C7M4 288 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 TMEM253P0C7T8 217 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 LINC00271P0C7V0 271 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 HARSP12081 509 aaKnown RBP10.96□□□□□ -0.65
PHGDH-224ENST00000641711 CYP3A5P20815 502 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 PAFAH1B1P43034 410 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 SCNN1GP51170 649 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 NAP1L1P55209 391 aaKnown RBP10.96□□□□□ -0.65
PHGDH-224ENST00000641711 VSNL1P62760 191 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 TUSC3Q13454 348 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 TMCO2Q7Z6W1 182 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-224ENST00000641711 ZBTB33Q86T24 672 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 ARHGEF19Q8IW93 802 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 FAM71AQ8IYT1 594 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 CEP120Q8N960 986 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 GSTCDQ8NEC7 633 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 ZSWIM2Q8NEG5 633 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 SPATA4Q8NEY3 305 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 TPCN2Q8NHX9 752 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 FAM81BQ96LP2 452 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 ZNF558Q96NG5 402 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 FAM193BQ96PV7 902 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-224ENST00000641711 PPP1R10Q96QC0 940 aaKnown RBP10.96□□□□□ -0.65
PHGDH-224ENST00000641711 RHOXF2Q9BQY4 288 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 APOL6Q9BWW8 343 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 FUT8Q9BYC5 575 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 UBXN6Q9BZV1 441 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 HAPLN2Q9GZV7 340 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 LMAN2LQ9H0V9 348 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 CWH43Q9H720 699 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 UBE2TQ9NPD8 197 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-224ENST00000641711 UBQLN1Q9UMX0 589 aaKnown RBP10.96□□□□□ -0.65
PHGDH-224ENST00000641711 LZTS1Q9Y250 596 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 INPP5FQ9Y2H2 1132 aa10.96□□□□□ -0.65
PHGDH-224ENST00000641711 MRPL42Q9Y6G3 142 aaKnown RBP10.96□□□□□ -0.65
PHGDH-224ENST00000641711 MYH10P35580 1976 aa10.96□□□□□ -0.66
PHGDH-224ENST00000641711 LCHNA4D1U4 455 aa10.95□□□□□ -0.66
PHGDH-224ENST00000641711 ZNF233A6NK53 670 aa10.95□□□□□ -0.66
PHGDH-224ENST00000641711 SPDYE4A6NLX3 237 aa10.95□□□□□ -0.66
PHGDH-224ENST00000641711 MEIS3P2A8K0S8 358 aa10.95□□□□□ -0.66
PHGDH-224ENST00000641711 TMEM189-UBE2V1I3L0A0 370 aa10.95□□□□□ -0.66
PHGDH-224ENST00000641711 PTGESO14684 152 aa10.95□□□□□ -0.66
PHGDH-224ENST00000641711 SEC31AO94979 1220 aaKnown RBP10.95□□□□□ -0.66
PHGDH-224ENST00000641711 CXCL8P10145 99 aa10.95□□□□□ -0.66
PHGDH-224ENST00000641711 TNFAIP3P21580 790 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms