RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 FAM160B1Q5W0V3 765 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 LYSMD4Q5XG99 296 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 LPCAT2Q7L5N7 544 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 CATSPER4Q7RTX7 472 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 SIRT2Q8IXJ6 389 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 TSTD1Q8NFU3 115 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 MED8Q96G25 268 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 GCOM2Q9BZD3 368 aaPredicted RBP7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 NUCKS1Q9H1E3 243 aaKnown RBP7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 ECHDC1Q9NTX5 307 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 MAN2B2Q9Y2E5 1009 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 SETD2Q9BYW2 2564 aaPredicted RBP7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 NFASCO94856 1347 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 CNTNAP2Q9UHC6 1331 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 OTOGQ6ZRI0 2925 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 TADA2AO75478 443 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 KIF4AO95239 1232 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 LRG1P02750 347 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 SFPQP23246 707 aaKnown RBP eCLIP7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 TMOD1P28289 359 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 CHRNA4P43681 627 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 GRSF1Q12849 480 aaKnown RBP eCLIP7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 DUOXA1Q1HG43 343 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 MFSD6Q6ZSS7 791 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 C11orf74Q86VG3 221 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 RASSF3Q86WH2 238 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 TTC30AQ86WT1 665 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 KSR1Q8IVT5 923 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 CMTR1Q8N1G2 835 aaKnown RBP7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 GALNT15Q8N3T1 639 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 SETD7Q8WTS6 366 aaKnown RBP7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 SLITRK6Q9H5Y7 841 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 LY9Q9HBG7 655 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 AGO4Q9HCK5 861 aaKnown RBP7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 CDY1Q9Y6F8 540 aa7.69□□□□□ -1.18
SCAMP1-206ENST00000618166 SF3B1O75533 1304 aaKnown RBP eCLIP7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 PNMA6FA0A0J9YX94 578 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 ARHGEF37A1IGU5 675 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 PALM3A6NDB9 673 aaPredicted RBP7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 ZNF197O14709 1029 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 MAGEB2O15479 319 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 MICAL2O94851 1124 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 SEC24AO95486 1093 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 ITGA4P13612 1032 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 HNRNPLP14866 589 aaKnown RBP eCLIP7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 HOXA11P31270 313 aaPredicted RBP7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 P2RY2P41231 377 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 SLC14A1Q13336 389 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 SMAD1Q15797 465 aaKnown RBP7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 TRIM68Q6AZZ1 485 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 DHRS13Q6UX07 377 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 GSTCDQ8NEC7 633 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 OLIG1Q8TAK6 271 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 SHKBP1Q8TBC3 707 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 BAHD1Q8TBE0 780 aaPredicted RBP7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 CUL5Q93034 780 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 NXPE2Q96DL1 559 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 LIN37Q96GY3 246 aaPredicted RBP7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 NAF1Q96HR8 494 aaKnown RBP7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 ZSCAN10Q96SZ4 725 aaPredicted RBP7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 MXRA8Q9BRK3 442 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 EIF2AQ9BY44 585 aaKnown RBP7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 RIOX1Q9H6W3 641 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 IL21RQ9HBE5 538 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 AGPAT5Q9NUQ2 364 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 CEP72Q9P209 647 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 IPPQ9Y573 584 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 MAFBQ9Y5Q3 323 aaPredicted RBP7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 HEMK1Q9Y5R4 338 aaPredicted RBP7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 HELZP42694 1942 aaKnown RBP7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 POLQO75417 2590 aa7.68□□□□□ -1.18
SCAMP1-206ENST00000618166 BLACEA4D250 179 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 PIK3CDO00329 1044 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 PIK3R2O00459 728 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 TRDMT1O14717 391 aaKnown RBP7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 MAFGO15525 162 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 PRAMEF12O95522 483 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 KIF5BP33176 963 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 GALK1P51570 392 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 PSMD2Q13200 908 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 HSP90AA2PQ14568 343 aaPredicted RBP7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 ALX1Q15699 326 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 ITPRIPL2Q3MIP1 535 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 CYP4A22Q5TCH4 519 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 KIAA1614Q5VZ46 1190 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 ZNF746Q6NUN9 644 aaPredicted RBP7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 ARID3BQ8IVW6 561 aaPredicted RBP7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 LRRN4Q8WUT4 740 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 ESR2Q92731 530 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 PGBD1Q96JS3 809 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 CNOT6LQ96LI5 555 aaKnown RBP7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 SH2D3AQ9BRG2 576 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 POLR3CQ9BUI4 534 aaPredicted RBP7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 FAM117AQ9C073 453 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 ZNF768Q9H5H4 540 aaKnown RBP7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 CYLDQ9NQC7 956 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 HPS4Q9NQG7 708 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 AK5Q9Y6K8 562 aa7.67□□□□□ -1.18
SCAMP1-206ENST00000618166 GOLGA4Q13439 2230 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms