RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 PHLDB3Q6NSJ2 640 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 POTEHQ6S545 545 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 DPH6Q7L8W6 267 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 LRRTM3Q86VH5 581 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 WDR49Q8IV35 697 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 NELFCDQ8IXH7 590 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 GRAMD1CQ8IYS0 662 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 HS6ST3Q8IZP7 471 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 TMEM86AQ8N2M4 240 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 TMEM105Q8N8V8 129 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 XXYLT1Q8NBI6 393 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 PRSS33Q8NF86 280 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 GOLGA5Q8TBA6 731 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 GPR152Q8TDT2 470 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 NOC3LQ8WTT2 800 aaKnown RBP11.33□□□□□ -0.6
CCDC9-203ENST00000596938 ING5Q8WYH8 240 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 TCEAL4Q96EI5 215 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 ANKRD36BP1Q96IX9 119 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 ACBD6Q9BR61 282 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 LRRC3Q9BY71 257 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 GPR88Q9GZN0 384 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 IRF2BPLQ9H1B7 796 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 DNAJC25Q9H1X3 360 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 SIX4Q9UIU6 781 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 MYH11P35749 1972 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 DENND4AQ7Z401 1863 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.32□□□□□ -0.6
CCDC9-203ENST00000596938 TULP1O00294 542 aaPredicted RBP11.32□□□□□ -0.6
CCDC9-203ENST00000596938 GABRDO14764 452 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 CLIC2O15247 247 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 GALR2O43603 387 aaPredicted RBP11.32□□□□□ -0.6
CCDC9-203ENST00000596938 HUS1O60921 280 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 PRPF40AO75400 957 aaKnown RBP11.32□□□□□ -0.6
CCDC9-203ENST00000596938 MOSPD3O75425 235 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 TNNC2P02585 160 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 KRT19P08727 400 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 TMEM191BP0C7N4 346 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 CEBPBP17676 345 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 AOC1P19801 751 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 SYKP43405 635 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 NDUFA8P51970 172 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 PFKPQ01813 784 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 TCF15Q12870 199 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 MYO1EQ12965 1108 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 STK4Q13043 487 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 PSMD6Q15008 389 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 SLC39A12Q504Y0 691 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 SCARA3Q6AZY7 606 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 LIMS2Q7Z4I7 341 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 DNAJB7Q7Z6W7 309 aaPredicted RBP11.32□□□□□ -0.6
CCDC9-203ENST00000596938 DCP1BQ8IZD4 617 aaKnown RBP11.32□□□□□ -0.6
CCDC9-203ENST00000596938 PDCL2Q8N4E4 241 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 TOP6BLQ8N6T0 577 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 RDH13Q8NBN7 331 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 FLCNQ8NFG4 579 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 ST13P5Q8NFI4 369 aaPredicted RBP11.32□□□□□ -0.6
CCDC9-203ENST00000596938 OR5B17Q8NGF7 314 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 SPPL2BQ8TCT7 592 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 PSMG2Q969U7 264 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 ELSPBP1Q96BH3 223 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 CHAMP1Q96JM3 812 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 MTMR12Q9C0I1 747 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 TRPV4Q9HBA0 871 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 ASAH2Q9NR71 780 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 EXOC1Q9NV70 894 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 L1RE1Q9UN81 338 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 R3HCC1Q9Y3T6 440 aaKnown RBP11.32□□□□□ -0.6
CCDC9-203ENST00000596938 MTCL1Q9Y4B5 1905 aaKnown RBP11.32□□□□□ -0.6
CCDC9-203ENST00000596938 TRIP11Q15643 1979 aa11.32□□□□□ -0.6
CCDC9-203ENST00000596938 CITO14578 2027 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 PI15O43692 258 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 FGF19O95750 216 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 FAM163BP0C2L3 166 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 HAPLN1P10915 354 aaPredicted RBP11.31□□□□□ -0.6
CCDC9-203ENST00000596938 MYL4P12829 197 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 HOXD11P31277 338 aaPredicted RBP11.31□□□□□ -0.6
CCDC9-203ENST00000596938 LHX1P48742 406 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 CYP2J2P51589 502 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 STARD6P59095 220 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 CYP24A1Q07973 514 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 NFE2Q16621 373 aaPredicted RBP11.31□□□□□ -0.6
CCDC9-203ENST00000596938 KMT5BQ4FZB7 885 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 FAM78AQ5JUQ0 283 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 CWF19L1Q69YN2 538 aaKnown RBP11.31□□□□□ -0.6
CCDC9-203ENST00000596938 TANGO2Q6ICL3 276 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 TRAPPC11Q7Z392 1133 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 ITIH5Q86UX2 942 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 TMC8Q8IU68 726 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 SMARCD2Q92925 531 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 HPDLQ96IR7 371 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 SHDQ96IW2 340 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 ZSWIM3Q96MP5 696 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 ASB16Q96NS5 453 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 FNBP1Q96RU3 617 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 KXD1Q9BQD3 176 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 ZFP14Q9HCL3 533 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 DMAC2Q9NW81 257 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 CA14Q9ULX7 337 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 SNX9Q9Y5X1 595 aa11.31□□□□□ -0.6
CCDC9-203ENST00000596938 MUC6Q6W4X9 2439 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms