RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 TMEM173Q86WV6 379 aaPredicted RBP11.4□□□□□ -0.58
SMAD4-214ENST00000592186 CEP57Q86XR8 500 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 ARHGEF19Q8IW93 802 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 DRC7Q8IY82 874 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 ADGRF2Q8IZF7 708 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 VPS52Q8N1B4 723 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 TMEM130Q8N3G9 435 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 OR6B3Q8NGW1 331 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 SPPL3Q8TCT6 385 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 TNIP3Q96KP6 325 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 SPAG5Q96R06 1193 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 ACBD6Q9BR61 282 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 HERC2P3Q9BVR0 1158 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 NAA15Q9BXJ9 866 aaKnown RBP11.4□□□□□ -0.58
SMAD4-214ENST00000592186 LMAN2LQ9H0V9 348 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 GANQ9H2C0 597 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 NGRNQ9NPE2 291 aaKnown RBP11.4□□□□□ -0.58
SMAD4-214ENST00000592186 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.4□□□□□ -0.58
SMAD4-214ENST00000592186 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.4□□□□□ -0.58
SMAD4-214ENST00000592186 MRPL17Q9NRX2 175 aaKnown RBP11.4□□□□□ -0.58
SMAD4-214ENST00000592186 CISHQ9NSE2 258 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 CAPN11Q9UMQ6 739 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 L1RE1Q9UN81 338 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 POLIQ9UNA4 740 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 CNTN6Q9UQ52 1028 aa11.4□□□□□ -0.58
SMAD4-214ENST00000592186 LUC7L2Q9Y383 392 aaKnown RBP11.4□□□□□ -0.58
SMAD4-214ENST00000592186 OR6C75A6NL08 312 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 F8W810 466 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 I3L4J1 428 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 LPXNO60711 386 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 URODP06132 367 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 CTSAP10619 480 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 STAT1P42224 750 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 GLUD2P49448 558 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 KLK7P49862 253 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 CDH8P55286 799 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 ZBED6P86452 979 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 DSG1Q02413 1049 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 GPM6BQ13491 265 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 RAPGEF1Q13905 1077 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 MAPRE1Q15691 268 aaKnown RBP11.39□□□□□ -0.59
SMAD4-214ENST00000592186 TSR1Q2NL82 804 aaKnown RBP11.39□□□□□ -0.59
SMAD4-214ENST00000592186 VARS2Q5ST30 1063 aaKnown RBP11.39□□□□□ -0.59
SMAD4-214ENST00000592186 KIAA0319Q5VV43 1072 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 IQCEQ6IPM2 695 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 CRYBG2Q8N1P7 616 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 BCL7CQ8WUZ0 217 aaPredicted RBP11.39□□□□□ -0.59
SMAD4-214ENST00000592186 PIK3R5Q8WYR1 880 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 SHC3Q92529 594 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 SYN2Q92777 582 aaPredicted RBP11.39□□□□□ -0.59
SMAD4-214ENST00000592186 KREMEN1Q96MU8 473 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 NT5C1AQ9BXI3 368 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 DDX43Q9NXZ2 648 aaKnown RBP11.39□□□□□ -0.59
SMAD4-214ENST00000592186 IMPACTQ9P2X3 320 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 STXBP5LQ9Y2K9 1186 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 BACE2Q9Y5Z0 518 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 IRAK3Q9Y616 596 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 CEP290O15078 2479 aa11.39□□□□□ -0.59
SMAD4-214ENST00000592186 TDRD15B5MCY1 1934 aaKnown RBP11.39□□□□□ -0.59
SMAD4-214ENST00000592186 A8MXQ7 604 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 FOXN3O00409 490 aaPredicted RBP11.38□□□□□ -0.59
SMAD4-214ENST00000592186 CILPO75339 1184 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 CXCL14O95715 111 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 C1RP00736 705 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 PAEPP09466 180 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 KRT5P13647 590 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 CD58P19256 250 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 ACO1P21399 889 aaKnown RBP11.38□□□□□ -0.59
SMAD4-214ENST00000592186 TKTP29401 623 aaKnown RBP11.38□□□□□ -0.59
SMAD4-214ENST00000592186 TSPY1Q01534 308 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 PTK2Q05397 1052 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 SMARCB1Q12824 385 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 SMC1AQ14683 1233 aaKnown RBP11.38□□□□□ -0.59
SMAD4-214ENST00000592186 DRAP1Q14919 205 aaPredicted RBP11.38□□□□□ -0.59
SMAD4-214ENST00000592186 PTPROQ16827 1216 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 ARHGAP44Q17R89 818 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 CTXN3Q4LDR2 81 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 ZNF280DQ6N043 979 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 SCARA5Q6ZMJ2 495 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 TAS1R1Q7RTX1 841 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 TMC7Q7Z402 723 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 TMC6Q7Z403 805 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 CNGA4Q8IV77 575 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 FAM71AQ8IYT1 594 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 DCP1BQ8IZD4 617 aaKnown RBP11.38□□□□□ -0.59
SMAD4-214ENST00000592186 MRPL43Q8N983 215 aaKnown RBP11.38□□□□□ -0.59
SMAD4-214ENST00000592186 KBTBD7Q8WVZ9 684 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 RIN2Q8WYP3 895 aaPredicted RBP11.38□□□□□ -0.59
SMAD4-214ENST00000592186 TMEM176AQ96HP8 235 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 MRPL45Q9BRJ2 306 aaKnown RBP11.38□□□□□ -0.59
SMAD4-214ENST00000592186 VN1R3Q9BXE9 311 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 ZNF576Q9H609 170 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 SMYD3Q9H7B4 428 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 NLRC4Q9NPP4 1024 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 TLR9Q9NR96 1032 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 FNIP2Q9P278 1114 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 CDH9Q9ULB4 789 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 MTUS1Q9ULD2 1270 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 MAFFQ9ULX9 164 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 PCDHB4Q9Y5E5 795 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms