RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 KPNA7A9QM74 516 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 ATMINO43313 823 aaPredicted RBP12.14□□□□□ -0.47
SMAD4-205ENST00000588745 NBNO60934 754 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 MTA2O94776 668 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 CYP1A2P05177 515 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 MYBL1P10243 752 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 VDRP11473 427 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 COL6A1P12109 1028 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 IBSPP21815 317 aaPredicted RBP12.14□□□□□ -0.47
SMAD4-205ENST00000588745 SSTR3P32745 418 aaPredicted RBP12.14□□□□□ -0.47
SMAD4-205ENST00000588745 CDH5P33151 784 aaPredicted RBP12.14□□□□□ -0.47
SMAD4-205ENST00000588745 AFF1P51825 1210 aaKnown RBP12.14□□□□□ -0.47
SMAD4-205ENST00000588745 LBX1P52954 281 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 ORC1Q13415 861 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 TRIM60Q495X7 471 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 C1orf53Q5VUE5 145 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 SLC24A5Q71RS6 500 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 MON1BQ7L1V2 547 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 LIMS2Q7Z4I7 341 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 RTN4RL1Q86UN2 441 aaPredicted RBP12.14□□□□□ -0.47
SMAD4-205ENST00000588745 UNC93AQ86WB7 457 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 PHF13Q86YI8 300 aaPredicted RBP12.14□□□□□ -0.47
SMAD4-205ENST00000588745 MCOLN2Q8IZK6 566 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 SYCE1Q8N0S2 351 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 ANKLE1Q8NAG6 615 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 C1orf131Q8NDD1 294 aaKnown RBP12.14□□□□□ -0.47
SMAD4-205ENST00000588745 CPA5Q8WXQ8 436 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 TOX2Q96NM4 488 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 NT5C1AQ9BXI3 368 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 AVENQ9NQS1 362 aaPredicted RBP12.14□□□□□ -0.47
SMAD4-205ENST00000588745 CTTNBP2NLQ9P2B4 639 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 CNOT8Q9UFF9 292 aaKnown RBP12.14□□□□□ -0.47
SMAD4-205ENST00000588745 COG5Q9UP83 839 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 CEP83Q9Y592 693 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 SAR1BQ9Y6B6 198 aa12.14□□□□□ -0.47
SMAD4-205ENST00000588745 DNAH12Q6ZR08 3092 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 MYH10P35580 1976 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 DCDC2CA8MYV0 355 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 PODXLO00592 558 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 NCK2O43639 380 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 SLU7O95391 586 aaKnown RBP12.13□□□□□ -0.47
SMAD4-205ENST00000588745 EOMESO95936 686 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 FTCDO95954 541 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 GTF2F1P35269 517 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMAD4-205ENST00000588745 GJA8P48165 433 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 CTCFP49711 727 aaPredicted RBP12.13□□□□□ -0.47
SMAD4-205ENST00000588745 LILRA4P59901 499 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 C1QBPQ07021 282 aaKnown RBP12.13□□□□□ -0.47
SMAD4-205ENST00000588745 GPNMBQ14956 572 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 SOWAHAQ2M3V2 549 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 SGO2Q562F6 1265 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 PLEKHG4Q58EX7 1191 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 MEI1Q5TIA1 1274 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 SLFN11Q7Z7L1 901 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 TOP6BLQ8N6T0 577 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 TMEM35BQ8NCS4 154 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 ZNF564Q8TBZ8 553 aaPredicted RBP12.13□□□□□ -0.47
SMAD4-205ENST00000588745 DIS3LQ8TF46 1054 aaKnown RBP12.13□□□□□ -0.47
SMAD4-205ENST00000588745 KBTBD7Q8WVZ9 684 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 APBB2Q92870 758 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 VCPIP1Q96JH7 1222 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 C11orf70Q9BRQ4 267 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 TLR10Q9BXR5 811 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 ZNF518BQ9C0D4 1074 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 UVRAGQ9P2Y5 699 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 KIAA1257Q9ULG3 409 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 SNX12Q9UMY4 172 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 L1RE1Q9UN81 338 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 HYOU1Q9Y4L1 999 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 NME7Q9Y5B8 376 aa12.13□□□□□ -0.47
SMAD4-205ENST00000588745 TSC2P49815 1807 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 UQCRHLA0A096LP55 91 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 CASTOR2A6NHX0 329 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 O00370 1275 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 BUB1BO60566 1050 aaPredicted RBP12.12□□□□□ -0.47
SMAD4-205ENST00000588745 HUS1O60921 280 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 PARNO95453 639 aaKnown RBP12.12□□□□□ -0.47
SMAD4-205ENST00000588745 UQCRHP07919 91 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 RPL9P32969 192 aaKnown RBP12.12□□□□□ -0.47
SMAD4-205ENST00000588745 CLCNKBP51801 687 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 FAM189BP81408 668 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 TLE2Q04725 743 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 FAAP100Q0VG06 881 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 TUSC3Q13454 348 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 WHAMMP3Q1A5X7 153 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 C11orf63Q6NUN7 778 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 DENND1BQ6P3S1 775 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 DPH6Q7L8W6 267 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 DAAM2Q86T65 1068 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 ADGRF2Q8IZF7 708 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 APPL2Q8NEU8 664 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 DBF4BQ8NFT6 615 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 OR6B3Q8NGW1 331 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 SEPT8Q92599 483 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 HEXIM2Q96MH2 286 aaKnown RBP12.12□□□□□ -0.47
SMAD4-205ENST00000588745 UROC1Q96N76 676 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 NUP85Q9BW27 656 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 LHX5Q9H2C1 402 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 HIPK3Q9H422 1215 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 GOLPH3Q9H4A6 298 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms