RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 PSMD2Q13200 908 aa10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 ZNF211Q13398 564 aaPredicted RBP10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 HSP90AA2PQ14568 343 aaPredicted RBP10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 KNOP1Q1ED39 458 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 C11orf91Q3C1V1 193 aa10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 ZCWPW2Q504Y3 356 aa10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 RTP2Q5QGT7 225 aa10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 PLPP4Q5VZY2 271 aa10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 LMBRD2Q68DH5 695 aaPredicted RBP10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 ARMCX5Q6P1M9 558 aa10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 VPS52Q8N1B4 723 aa10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 CXorf38Q8TB03 319 aa10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 FBXL18Q96ME1 805 aa10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 FAM193BQ96PV7 902 aaPredicted RBP10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 TCF25Q9BQ70 676 aa10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 RUBCNLQ9H714 662 aa10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 TMEM206Q9H813 350 aa10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 PDE11AQ9HCR9 933 aa10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 TLR9Q9NR96 1032 aa10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 TOPORSQ9NS56 1045 aaPredicted RBP10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 DMAC2Q9NW81 257 aa10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 EXOC7Q9UPT5 735 aa10.27□□□□□ -0.77
NPLOC4-219ENST00000576713 TRIP11Q15643 1979 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 A0A1W2PNR3 127 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 BIN1O00499 593 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 EXTL3O43909 919 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 GLP2RO95838 553 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 ABCD1P33897 745 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 PPM1AP35813 382 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 PRCPP42785 496 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 BRCC3P46736 316 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 PPP2R3AQ06190 1150 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 DLX2Q07687 328 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 MTMR3Q13615 1198 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 PTPN14Q15678 1187 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 SLFN12LQ6IEE8 588 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 KANK3Q6NY19 840 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 RIPOR1Q6ZS17 1223 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 APBB1IPQ7Z5R6 666 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 DDX53Q86TM3 631 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 RBM23Q86U06 439 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 BRSK2Q8IWQ3 736 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 ELOA2Q8IYF1 753 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 NOC3LQ8WTT2 800 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 RSPH1Q8WYR4 309 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 EEF2KMTQ96G04 330 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 TMEM169Q96HH4 297 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 POP1Q99575 1024 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 LMAN2LQ9H0V9 348 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 RPF1Q9H9Y2 349 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 RBAKQ9NYW8 714 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 LMCD1Q9NZU5 365 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 ADAM28Q9UKQ2 775 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 LZTS1Q9Y250 596 aa10.26□□□□□ -0.77
NPLOC4-219ENST00000576713 TRIM49BA6NDI0 452 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 C2orf71A6NGG8 1288 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 DLL1O00548 723 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 PODXLO00592 558 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 ICMTO60725 284 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 LTBRP36941 435 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 TFF2Q03403 129 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 UBE3AQ05086 875 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 KCNC3Q14003 757 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 MORC3Q14149 939 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 COL19A1Q14993 1142 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 C1orf220Q5T0J3 134 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 ZNF658Q5TYW1 1059 aaPredicted RBP10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 KIAA0319Q5VV43 1072 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 SPATA1Q5VX52 437 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 FUT10Q6P4F1 479 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 PRSS55Q6UWB4 352 aaPredicted RBP10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 RSPO2Q6UXX9 243 aaPredicted RBP10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 STXBP4Q6ZWJ1 553 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 C12orf56Q8IXR9 622 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 PGBD3Q8N328 593 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 GPD1LQ8N335 351 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 GUF1Q8N442 669 aaKnown RBP10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 MRPL43Q8N983 215 aaKnown RBP10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 OR5B17Q8NGF7 314 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 SMARCE1Q969G3 411 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 SUSD3Q96L08 255 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 GSDMAQ96QA5 445 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 MED15Q96RN5 788 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 HERC2P3Q9BVR0 1158 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 COL25A1Q9BXS0 654 aaPredicted RBP10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 CLSTN2Q9H4D0 955 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 NSUN3Q9H649 340 aaKnown RBP10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 PLEKHA5Q9HAU0 1116 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 CHST7Q9NS84 486 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 STIM2Q9P246 746 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 TRIOO75962 3097 aa10.25□□□□□ -0.77
NPLOC4-219ENST00000576713 ANO9A1A5B4 782 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 SOWAHDA6NJG2 315 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 TMEM189-UBE2V1I3L0A0 370 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 C2CD2LO14523 706 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 ADAM12O43184 909 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 TBX10O75333 385 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 B3GAT3O94766 335 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 CXCL14O95715 111 aa10.24□□□□□ -0.77
NPLOC4-219ENST00000576713 SOD2P04179 222 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms