RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 CHRDQ9H2X0 955 aa14.5□□□□□ -0.09
SPG7-207ENST00000563218 CUEDC2Q9H467 287 aa14.5□□□□□ -0.09
SPG7-207ENST00000563218 KIAA1468Q9P260 1216 aa14.5□□□□□ -0.09
SPG7-207ENST00000563218 AFF4Q9UHB7 1163 aaKnown RBP14.5□□□□□ -0.09
SPG7-207ENST00000563218 DNM3Q9UQ16 869 aa14.5□□□□□ -0.09
SPG7-207ENST00000563218 HELZP42694 1942 aaKnown RBP14.5□□□□□ -0.09
SPG7-207ENST00000563218 KMT2BQ9UMN6 2715 aaPredicted RBP14.5□□□□□ -0.09
SPG7-207ENST00000563218 ARNTLO00327 626 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 PPEF2O14830 753 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 MAPTP10636 758 aaKnown RBP14.49□□□□□ -0.09
SPG7-207ENST00000563218 RPL9P32969 192 aaKnown RBP14.49□□□□□ -0.09
SPG7-207ENST00000563218 SOX9P48436 509 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 EPHA5P54756 1037 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 TYRO3Q06418 890 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 DMWDQ09019 674 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 POSTNQ15063 836 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 TPGS2Q68CL5 300 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 GAS2L3Q86XJ1 694 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 TTC9BQ8N6N2 239 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 TMEM161BQ8NDZ6 487 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 LRRC15Q8TF66 581 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 SMARCD2Q92925 531 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 DRC1Q96MC2 740 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 FUCA2Q9BTY2 467 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 LRRC3Q9BY71 257 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 MAGEF1Q9HAY2 307 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 PCDHB8Q9UN66 801 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 PIAS3Q9Y6X2 628 aa14.49□□□□□ -0.09
SPG7-207ENST00000563218 HEPACAM2A8MVW5 462 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 ZNF197O14709 1029 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 NCAM2O15394 837 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 SOAT2O75908 522 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 PSMC3P17980 439 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 PLCG1P19174 1290 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 AFMP43652 599 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 ATXN1P54253 815 aaKnown RBP14.48□□□□□ -0.09
SPG7-207ENST00000563218 SATB1Q01826 763 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 PNOCQ13519 176 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 STX1AQ16623 288 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 FAM3CQ92520 227 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 PAGE5Q96GU1 130 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 TMEM209Q96SK2 561 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 NELL2Q99435 816 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 LMAN1LQ9HAT1 526 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 ASAH2Q9NR71 780 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 RBM12Q9NTZ6 932 aaKnown RBP14.48□□□□□ -0.09
SPG7-207ENST00000563218 C2orf42Q9NWW7 574 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 STK17AQ9UEE5 414 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 USP18Q9UMW8 372 aa14.48□□□□□ -0.09
SPG7-207ENST00000563218 MRPS17Q9Y2R5 130 aaKnown RBP14.48□□□□□ -0.09
SPG7-207ENST00000563218 A0A1W2PRU2 124 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 M0QZQ0 153 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 TOM1L1O75674 476 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 MICAL2O94851 1124 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 SMC2O95347 1197 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 PLS3P13797 630 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 CCNE1P24864 410 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 GUCY2CP25092 1073 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 MCL1Q07820 350 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 SRSF5Q13243 272 aaKnown RBP14.47□□□□□ -0.09
SPG7-207ENST00000563218 CYP4A22Q5TCH4 519 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 Q6ZS52 159 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 GRAMD1CQ8IYS0 662 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 ELMOD1Q8N336 334 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 BEST2Q8NFU1 509 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 TTC8Q8TAM2 541 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 ERCC4Q92889 916 aaPredicted RBP14.47□□□□□ -0.09
SPG7-207ENST00000563218 IRF7Q92985 503 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 SMARCE1Q969G3 411 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 ZNF512Q96ME7 567 aaPredicted RBP14.47□□□□□ -0.09
SPG7-207ENST00000563218 LRRC3BQ96PB8 259 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 MKNK1Q9BUB5 465 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 ANO10Q9NW15 660 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 SDK1Q7Z5N4 2213 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 LAMA1P25391 3075 aa14.47□□□□□ -0.09
SPG7-207ENST00000563218 TTC26A0AVF1 554 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 DCDC2BA2VCK2 349 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 SLC38A8A6NNN8 435 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 MAN2B1O00754 1011 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 ZNF263O14978 683 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 FAM189A1O60320 539 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 PRR29P0C7W0 189 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 CHRNB1P11230 501 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 MATR3P43243 847 aaKnown RBP eCLIP14.46□□□□□ -0.09
SPG7-207ENST00000563218 AARSP49588 968 aaKnown RBP eCLIP14.46□□□□□ -0.09
SPG7-207ENST00000563218 SLC12A3P55017 1021 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 YWHAHQ04917 246 aaPredicted RBP14.46□□□□□ -0.09
SPG7-207ENST00000563218 SPEM2Q0P670 501 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 STRN3Q13033 797 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 DUSP4Q13115 394 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 ZBTB6Q15916 424 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 TMEM119Q4V9L6 283 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 HYIQ5T013 277 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 L1TD1Q5T7N2 865 aaKnown RBP14.46□□□□□ -0.09
SPG7-207ENST00000563218 IQCEQ6IPM2 695 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 TXNDC11Q6PKC3 985 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 MFSD6LQ8IWD5 586 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 APPL2Q8NEU8 664 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 SPIRE2Q8WWL2 714 aa14.46□□□□□ -0.09
SPG7-207ENST00000563218 KIF12Q96FN5 646 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms