RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 CASP5P51878 434 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 WNT7BP56706 349 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 NTHL1P78549 312 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 FAM160A1Q05DH4 1040 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 MYBPC2Q14324 1141 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 STX1AQ16623 288 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 ZC2HC1CQ53FD0 456 aaPredicted RBP7.45□□□□□ -1.22
SPG11-224ENST00000561268 SPECC1Q5M775 1068 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 C9orf57Q5W0N0 161 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 ADALQ6DHV7 355 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 JADE1Q6IE81 842 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 SLFN12LQ6IEE8 588 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 PHLDB3Q6NSJ2 640 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 CCDC73Q6ZRK6 1079 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 MTSS1LQ765P7 747 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 GRASPQ7Z6J2 395 aaPredicted RBP7.45□□□□□ -1.22
SPG11-224ENST00000561268 TMC8Q8IU68 726 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 BRSK2Q8IWQ3 736 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 CCDC105Q8IYK2 499 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 SLC44A3Q8N4M1 653 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 MYCT1Q8N699 235 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 RNF214Q8ND24 703 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 APPL2Q8NEU8 664 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 ITFG1Q8TB96 612 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 KCNG4Q8TDN1 519 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 FGF14Q92915 247 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 BICD1Q96G01 975 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 TIGD1Q96MW7 591 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 KCNK17Q96T54 332 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 TCHPQ9BT92 498 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 LRRC3Q9BY71 257 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 FGFBP2Q9BYJ0 223 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 DNAJC25Q9H1X3 360 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 CUEDC2Q9H467 287 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 RPF1Q9H9Y2 349 aaKnown RBP7.45□□□□□ -1.22
SPG11-224ENST00000561268 MAGEF1Q9HAY2 307 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 ANO10Q9NW15 660 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 HCFC1R1Q9NWW0 138 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 DLGAP2Q9P1A6 1054 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 YIPF1Q9Y548 306 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 NUMBLQ9Y6R0 609 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 NCANO14594 1321 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 UBE4BO95155 1302 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 TNRC6BQ9UPQ9 1833 aaKnown RBP7.45□□□□□ -1.22
SPG11-224ENST00000561268 MYOFQ9NZM1 2061 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 ATG2BQ96BY7 2078 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 MTMR11A4FU01 709 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 OR6C75A6NL08 312 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 SHISA7A6NL88 538 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 SPTLC1O15269 473 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 EIF3DO15371 548 aaKnown RBP eCLIP7.44□□□□□ -1.22
SPG11-224ENST00000561268 CCL16O15467 120 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 MOSPD3O75425 235 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 RHOP08100 348 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 GARTP22102 1010 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 NBL1P41271 181 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 CCR2P41597 374 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 STAT6P42226 847 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 ZNF165P49910 485 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 GUCY2FP51841 1108 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 STARD6P59095 220 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 LILRA4P59901 499 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 YWHAHQ04917 246 aaPredicted RBP7.44□□□□□ -1.22
SPG11-224ENST00000561268 KCNA1Q09470 495 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 GPR17Q13304 367 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 TMEM132DQ14C87 1099 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 CTXN3Q4LDR2 81 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 PABPC1LQ4VXU2 614 aaKnown RBP7.44□□□□□ -1.22
SPG11-224ENST00000561268 CT47A1Q5JQC4 288 aaPredicted RBP7.44□□□□□ -1.22
SPG11-224ENST00000561268 RRAGBQ5VZM2 374 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 SHC4Q6S5L8 630 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 EPM2AIP1Q7L775 607 aaPredicted RBP7.44□□□□□ -1.22
SPG11-224ENST00000561268 LEMD2Q8NC56 503 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 ENGASEQ8NFI3 743 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 SPATA18Q8TC71 538 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 RSAD2Q8WXG1 361 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 BORCS6Q96GS4 357 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 RTP3Q9BQQ7 232 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 MSTO1Q9BUK6 570 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 TRIM9Q9C026 710 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 IRF2BPLQ9H1B7 796 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 IKZF4Q9H2S9 585 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 CRISPLD1Q9H336 500 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 PIDD1Q9HB75 910 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 TRPV4Q9HBA0 871 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 GDPD2Q9HCC8 539 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 ARHGEF3Q9NR81 526 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 GDE1Q9NZC3 331 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 AGO2Q9UKV8 859 aaKnown RBP7.44□□□□□ -1.22
SPG11-224ENST00000561268 NUB1Q9Y5A7 615 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 NUP205Q92621 2012 aa7.44□□□□□ -1.22
SPG11-224ENST00000561268 NYNRINQ9P2P1 1898 aaKnown RBP7.43□□□□□ -1.22
SPG11-224ENST00000561268 SMTNL1A8MU46 457 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 ARNTLO00327 626 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 KIAA0391O15091 583 aaKnown RBP7.43□□□□□ -1.22
SPG11-224ENST00000561268 SPTLC2O15270 562 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 CCP110O43303 1012 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 KINO60870 393 aaKnown RBP7.43□□□□□ -1.22
SPG11-224ENST00000561268 CUTAO60888 179 aa7.43□□□□□ -1.22
SPG11-224ENST00000561268 ECI2O75521 394 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms