RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 LAG3P18627 525 aa17.7■□□□□ 0.42
TPM1-219ENST00000559397 LILRA4P59901 499 aa17.7■□□□□ 0.42
TPM1-219ENST00000559397 GNG11P61952 73 aa17.7■□□□□ 0.42
TPM1-219ENST00000559397 ARID5AQ03989 594 aa17.7■□□□□ 0.42
TPM1-219ENST00000559397 PTK2Q05397 1052 aa17.7■□□□□ 0.42
TPM1-219ENST00000559397 SLC18A3Q16572 532 aa17.7■□□□□ 0.42
TPM1-219ENST00000559397 SGSM1Q2NKQ1 1148 aa17.7■□□□□ 0.42
TPM1-219ENST00000559397 SPOUT1Q5T280 376 aaKnown RBP17.7■□□□□ 0.42
TPM1-219ENST00000559397 KCNT2Q6UVM3 1135 aa17.7■□□□□ 0.42
TPM1-219ENST00000559397 ZNF571Q7Z3V5 609 aaPredicted RBP17.7■□□□□ 0.42
TPM1-219ENST00000559397 KIAA1328Q86T90 577 aa17.7■□□□□ 0.42
TPM1-219ENST00000559397 TMEM173Q86WV6 379 aaPredicted RBP17.7■□□□□ 0.42
TPM1-219ENST00000559397 COLGALT1Q8NBJ5 622 aa17.7■□□□□ 0.42
TPM1-219ENST00000559397 COLEC11Q9BWP8 271 aa17.7■□□□□ 0.42
TPM1-219ENST00000559397 MYO1AQ9UBC5 1043 aa17.7■□□□□ 0.42
TPM1-219ENST00000559397 NT5C1B-RDH14C9J2C7 533 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 GFPT2O94808 682 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 CA3P07451 260 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 PNPLA4P41247 253 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 ALDH7A1P49419 539 aaKnown RBP17.69■□□□□ 0.42
TPM1-219ENST00000559397 AARSP49588 968 aaKnown RBP eCLIP17.69■□□□□ 0.42
TPM1-219ENST00000559397 TAF6P49848 677 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 SPOPLQ6IQ16 392 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 ZNF592Q92610 1267 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 TAF4BQ92750 862 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 ZNF560Q96MR9 790 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 KREMEN1Q96MU8 473 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 ZNF558Q96NG5 402 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 NT5C1BQ96P26 610 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 WDR24Q96S15 920 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 SYT11Q9BT88 431 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 IRX2Q9BZI1 471 aaPredicted RBP17.69■□□□□ 0.42
TPM1-219ENST00000559397 LACRTQ9GZZ8 138 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 APOBEC3GQ9HC16 384 aaKnown RBP17.69■□□□□ 0.42
TPM1-219ENST00000559397 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.69■□□□□ 0.42
TPM1-219ENST00000559397 DNAI1Q9UI46 699 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 NENFQ9UMX5 172 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 NLRC5Q86WI3 1866 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 CHD9Q3L8U1 2897 aa17.69■□□□□ 0.42
TPM1-219ENST00000559397 FOXN3O00409 490 aaPredicted RBP17.68■□□□□ 0.42
TPM1-219ENST00000559397 PJA2O43164 708 aa17.68■□□□□ 0.42
TPM1-219ENST00000559397 KIF5CO60282 957 aa17.68■□□□□ 0.42
TPM1-219ENST00000559397 PNMA6AP0CW24 399 aaPredicted RBP17.68■□□□□ 0.42
TPM1-219ENST00000559397 NOP14P78316 857 aaKnown RBP17.68■□□□□ 0.42
TPM1-219ENST00000559397 GFPT1Q06210 699 aaPredicted RBP17.68■□□□□ 0.42
TPM1-219ENST00000559397 MYO1EQ12965 1108 aa17.68■□□□□ 0.42
TPM1-219ENST00000559397 ZNF699Q32M78 642 aa17.68■□□□□ 0.42
TPM1-219ENST00000559397 SV2CQ496J9 727 aa17.68■□□□□ 0.42
TPM1-219ENST00000559397 SLC39A11Q8N1S5 342 aa17.68■□□□□ 0.42
TPM1-219ENST00000559397 OLIG1Q8TAK6 271 aa17.68■□□□□ 0.42
TPM1-219ENST00000559397 HASPINQ8TF76 798 aa17.68■□□□□ 0.42
TPM1-219ENST00000559397 BCL7CQ8WUZ0 217 aaPredicted RBP17.68■□□□□ 0.42
TPM1-219ENST00000559397 JAKMIP2Q96AA8 810 aa17.68■□□□□ 0.42
TPM1-219ENST00000559397 COLQQ9Y215 455 aaPredicted RBP17.68■□□□□ 0.42
TPM1-219ENST00000559397 NUB1Q9Y5A7 615 aa17.68■□□□□ 0.42
TPM1-219ENST00000559397 A0A087X0T9 212 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 A0A1W2PPC1 479 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 CARNS1A5YM72 827 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 EFEMP2O95967 443 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 CCDC172P0C7W6 258 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 FAM228BP0C875 321 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 MAGEA1P43355 309 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 ARHGAP44Q17R89 818 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 TIGD5Q53EQ6 642 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 SPRED2Q7Z698 418 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 SHC3Q92529 594 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 TATDN2Q93075 761 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 IGSF21Q96ID5 467 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 FAM81BQ96LP2 452 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 TSGA10Q9BZW7 698 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 AAASQ9NRG9 546 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 GDAP2Q9NXN4 497 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 TRIM10Q9UDY6 481 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 ADAM28Q9UKQ2 775 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 TFR2Q9UP52 801 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 KPNA7A9QM74 516 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 KRT86O43790 486 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 TADA2AO75478 443 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 PAX3P23760 479 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 BRCC3P46736 316 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 MFAP3P55082 362 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 GCNT1Q02742 428 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 KIF5AQ12840 1032 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 RAB30Q15771 203 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 WDR44Q5JSH3 913 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 CCDC122Q5T0U0 273 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 ENOSF1Q7L5Y1 443 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 FAM71AQ8IYT1 594 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 KAT5Q92993 513 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 C17orf80Q9BSJ5 609 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 IMPG2Q9BZV3 1241 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 ADAMTS1Q9UHI8 967 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 MSRAQ9UJ68 235 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 PCDHB12Q9Y5F1 795 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 CHD7Q9P2D1 2997 aa17.67■□□□□ 0.42
TPM1-219ENST00000559397 ATP8B3O60423 1300 aa17.66■□□□□ 0.42
TPM1-219ENST00000559397 BMPR1AP36894 532 aa17.66■□□□□ 0.42
TPM1-219ENST00000559397 SMAD3P84022 425 aaKnown RBP17.66■□□□□ 0.42
TPM1-219ENST00000559397 TAP1Q03518 808 aa17.66■□□□□ 0.42
TPM1-219ENST00000559397 WDR72Q3MJ13 1102 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms