RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 PPEF2O14830 753 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 ATMINO43313 823 aaPredicted RBP10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 THAP12O43422 761 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 CILPO75339 1184 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 PAEPP09466 180 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 MYBL1P10243 752 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 CD58P19256 250 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 AKAP5P24588 427 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 YWHAEP62258 255 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 PTPN11Q06124 597 aaPredicted RBP10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 WDR72Q3MJ13 1102 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 NAA35Q5VZE5 725 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 SCARA5Q6ZMJ2 495 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 DAAM2Q86T65 1068 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 PCSK9Q8NBP7 692 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 SLC4A11Q8NBS3 891 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 ACTRT1Q8TDG2 376 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 UBE2Q2Q8WVN8 375 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 CD101Q93033 1021 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 C18orf25Q96B23 403 aaPredicted RBP10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 ZNF653Q96CK0 615 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 TWNKQ96RR1 684 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 RPS6KC1Q96S38 1066 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 NUP85Q9BW27 656 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 ELOVL4Q9GZR5 314 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 CRISPLD2Q9H0B8 497 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 SMYD3Q9H7B4 428 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 CTTNBP2NLQ9P2B4 639 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 TUBGCP4Q9UGJ1 667 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 IPPQ9Y573 584 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 KAT6AQ92794 2004 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 SMIM28A0A1B0GU29 152 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 PIRO00625 290 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 RPLP2P05387 115 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 RRM1P23921 792 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 BRD2P25440 801 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 SSTR3P32745 418 aaPredicted RBP10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 MAGEA10P43363 369 aaPredicted RBP10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 YARSP54577 528 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 C2orf54Q08AI8 447 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 INCA1Q0VD86 236 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 ZNF394Q53GI3 561 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 FAM26DQ5JW98 314 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 DCAF12L1Q5VU92 463 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 PLEKHA7Q6IQ23 1121 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 LIMS2Q7Z4I7 341 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 CPNE8Q86YQ8 564 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 SLC43A3Q8NBI5 491 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 ZNF564Q8TBZ8 553 aaPredicted RBP10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 DIS3LQ8TF46 1054 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 PNKPQ96T60 521 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 LHX5Q9H2C1 402 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 ERVK-5Q9HDB9 667 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 TTC7AQ9ULT0 858 aaPredicted RBP10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 UBQLN1Q9UMX0 589 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 ST3GAL5Q9UNP4 418 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 NME7Q9Y5B8 376 aa10.09□□□□□ -0.79
HNRNPC-223ENST00000556142 RALGAPA2Q2PPJ7 1873 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 KCNK3O14649 394 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 RPS6KA5O75582 802 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 CABYRO75952 493 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 LSM8O95777 96 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 SYN1P17600 705 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 CYP3A5P20815 502 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 COMTP21964 271 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 MMP8P22894 467 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 CTNNA2P26232 953 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 PAFAH1B1P43034 410 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 PEX5P50542 639 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 ACLYP53396 1101 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 SOX4Q06945 474 aaPredicted RBP10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 PTK7Q13308 1070 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 ITGA7Q13683 1181 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 DSC3Q14574 896 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 PTGISQ16647 500 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 PTPROQ16827 1216 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 CFAP221Q4G0U5 840 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 FAM47CQ5HY64 1035 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 C9orf57Q5W0N0 161 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 PPP1R2P3Q6NXS1 205 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 LLGL2Q6P1M3 1020 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 DENND1BQ6P3S1 775 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 MRPL10Q7Z7H8 261 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 RSPH3Q86UC2 560 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 PASD1Q8IV76 773 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 LRRC52Q8N7C0 313 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 ANKLE1Q8NAG6 615 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 BEST2Q8NFU1 509 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 TRIM11Q96F44 468 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 TMEM176AQ96HP8 235 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 BTBD6Q96KE9 485 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 TSEN34Q9BSV6 310 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 UBE2OQ9C0C9 1292 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 ZNF518BQ9C0D4 1074 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 AGO3Q9H9G7 860 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 CHST12Q9NRB3 414 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 RNF19AQ9NV58 838 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 HMGXB4Q9UGU5 601 aa10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 TRIP12Q14669 1992 aaPredicted RBP10.08□□□□□ -0.8
HNRNPC-223ENST00000556142 ALPK3Q96L96 1907 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms