RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 NIFKQ9BYG3 293 aaKnown RBP15.64■□□□□ 0.09
DDX55-209ENST00000542286 OSBPL8Q9BZF1 889 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 CISHQ9NSE2 258 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 BAIAP2L1Q9UHR4 511 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 NOP56O00567 594 aaKnown RBP15.64■□□□□ 0.09
DDX55-209ENST00000542286 ZC3H11AO75152 810 aaKnown RBP eCLIP15.64■□□□□ 0.095e-6■□□□□ 9.7
DDX55-209ENST00000542286 PRKCBP05771 671 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 CCNHP51946 323 aaPredicted RBP15.64■□□□□ 0.09
DDX55-209ENST00000542286 GKAP1Q5VSY0 366 aaPredicted RBP15.64■□□□□ 0.09
DDX55-209ENST00000542286 WDTC1Q8N5D0 677 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 CHST13Q8NET6 341 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 DNERQ8NFT8 737 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 SEPT1Q8WYJ6 367 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 RSRC1Q96IZ7 334 aaKnown RBP15.64■□□□□ 0.09
DDX55-209ENST00000542286 NOD2Q9HC29 1040 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 NRBP2Q9NSY0 501 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 HMGXB4Q9UGU5 601 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 MGAMO43451 1857 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 KIF3CO14782 793 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 RASGRF2O14827 1237 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 MAFO75444 373 aaPredicted RBP15.64■□□□□ 0.09
DDX55-209ENST00000542286 BANF1O75531 89 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 CNMDO75829 334 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 ATP6V1G2O95670 118 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 CXCL8P10145 99 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 NRLP54845 237 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 IRX1P78414 480 aaPredicted RBP15.64■□□□□ 0.09
DDX55-209ENST00000542286 ELF3P78545 371 aaPredicted RBP15.64■□□□□ 0.09
DDX55-209ENST00000542286 CYP4F22Q6NT55 531 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 HIBCHQ6NVY1 386 aaPredicted RBP15.64■□□□□ 0.09
DDX55-209ENST00000542286 GSTA5Q7RTV2 222 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 CPLX4Q7Z7G2 160 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 CYP4X1Q8N118 509 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 EMC1Q8N766 993 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 MORC4Q8TE76 937 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 CCT6BQ92526 530 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 KIAA1586Q9HCI6 787 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 DNPEPQ9ULA0 475 aa15.64■□□□□ 0.09
DDX55-209ENST00000542286 C5orf60A6NFR6 353 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 CD19P15391 556 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 MKRN3Q13064 507 aaKnown RBP15.63■□□□□ 0.09
DDX55-209ENST00000542286 SLFN12LQ6IEE8 588 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 HOOK3Q86VS8 718 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 RIOX2Q8IUF8 465 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 EGFL6Q8IUX8 553 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 ANKRD42Q8N9B4 389 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 SPATA33Q96N06 139 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 XPO6Q96QU8 1125 aaKnown RBP15.63■□□□□ 0.09
DDX55-209ENST00000542286 GPR20Q99678 358 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 ACO2Q99798 780 aaKnown RBP15.63■□□□□ 0.09
DDX55-209ENST00000542286 RNPEPQ9H4A4 650 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 AVENQ9NQS1 362 aaPredicted RBP15.63■□□□□ 0.09
DDX55-209ENST00000542286 CYTH4Q9UIA0 394 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 CSADQ9Y600 493 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 HGSO14964 777 aaPredicted RBP15.63■□□□□ 0.09
DDX55-209ENST00000542286 DNAJC8O75937 253 aaPredicted RBP15.63■□□□□ 0.09
DDX55-209ENST00000542286 ASS1P00966 412 aaKnown RBP15.63■□□□□ 0.09
DDX55-209ENST00000542286 GH1P01241 217 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 RARGP13631 454 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 SLC8A3P57103 927 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 KLF1Q13351 362 aaPredicted RBP15.63■□□□□ 0.09
DDX55-209ENST00000542286 LIN9Q5TKA1 542 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 TAX1BP1Q86VP1 789 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 BRSK2Q8IWQ3 736 aa15.63■□□□□ 0.09
DDX55-209ENST00000542286 C12orf50Q8NA57 414 aaPredicted RBP15.63■□□□□ 0.09
DDX55-209ENST00000542286 GOLGA8MH3BSY2 632 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 STAM2O75886 525 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 ATF2P15336 505 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 GAD2Q05329 585 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 FASTKD3Q14CZ7 662 aaKnown RBP15.62■□□□□ 0.09
DDX55-209ENST00000542286 RAB6CQ53S08 254 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 SYCP2LQ5T4T6 812 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 PLEKHA7Q6IQ23 1121 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 DENND1BQ6P3S1 775 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 METTL7BQ6UX53 244 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 EXOC3L1Q86VI1 746 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 FEZF2Q8TBJ5 459 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 THOC1Q96FV9 657 aaKnown RBP15.62■□□□□ 0.09
DDX55-209ENST00000542286 WDR90Q96KV7 1748 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 SGIP1Q9BQI5 828 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 RAB6CQ9H0N0 254 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 KDM4CQ9H3R0 1056 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 ZWILCHQ9H900 591 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 ANAPC5Q9UJX4 755 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 PTPRFP10586 1907 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 H0YCG3 227 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 PIGRP01833 764 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 KRT1P04264 644 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 CYP2C8P10632 490 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 EIF3BP55884 814 aaKnown RBP15.62■□□□□ 0.09
DDX55-209ENST00000542286 ZKSCAN8Q15776 578 aaPredicted RBP15.62■□□□□ 0.09
DDX55-209ENST00000542286 C11orf91Q3C1V1 193 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 ZNF568Q3ZCX4 644 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 SH3D19Q5HYK7 790 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 DCUN1D2Q6PH85 259 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 RHOT1Q8IXI2 618 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 LRRC34Q8IZ02 419 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 MAB21L3Q8N8X9 362 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 JOSD2Q8TAC2 188 aa15.62■□□□□ 0.09
DDX55-209ENST00000542286 NSMCE1Q8WV22 266 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms