RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 BPIFB1Q8TDL5 484 aa15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 SEPT5Q99719 369 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 SMOC1Q9H4F8 434 aa15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 PLEKHA5Q9HAU0 1116 aa15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 UBQLN1Q9UMX0 589 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 ASB3Q9Y575 518 aa15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 PCDHB6Q9Y5E3 794 aa15.22■□□□□ 0.03
SMARCA4-206ENST00000538456 FGF19O95750 216 aa15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 CCDC192P0DO97 292 aa15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 PLS3P13797 630 aa15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 GUCY2CP25092 1073 aa15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 HOXA6P31267 233 aa15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 CACNB1Q02641 598 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 MYBPC2Q14324 1141 aa15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 IL17AQ16552 155 aa15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 ITPRIPL2Q3MIP1 535 aa15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 ARMCX5Q6P1M9 558 aa15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 ITIH5Q86UX2 942 aa15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 KBTBD6Q86V97 674 aa15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 SYNPOQ8N3V7 929 aa15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 FBXO18Q8NFZ0 1043 aa15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 SPIRE2Q8WWL2 714 aa15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 GAB3Q8WWW8 586 aa15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 NTPCRQ9BSD7 190 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 MMTAG2Q9BU76 263 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 OBP2AQ9NY56 170 aa15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 RALYQ9UKM9 306 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-206ENST00000538456 TCHHQ07283 1943 aa15.21■□□□□ 0.02
SMARCA4-206ENST00000538456 DENND4CQ5VZ89 1909 aa15.21■□□□□ 0.02
SMARCA4-206ENST00000538456 LACTBL1A8MY62 500 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 EPN2O95208 641 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 ODC1P11926 461 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 TYMPP19971 482 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 CYP3A5P20815 502 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 PMLP29590 882 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 MCM2P49736 904 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 TOB1P50616 345 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 LIMK1P53667 647 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 PLCB2Q00722 1185 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 ZBTB6Q15916 424 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 ENOX2Q16206 610 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 MGAT5BQ3V5L5 792 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 SLC39A12Q504Y0 691 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 CACNA2D4Q7Z3S7 1137 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 OR10T2Q8NGX3 314 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 FAM212AQ96EL1 285 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 GCNAQ96QF7 691 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 PLIN2Q99541 437 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 TIPINQ9BVW5 301 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 TASP1Q9H6P5 420 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 POLR3BQ9NW08 1133 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 THG1LQ9NWX6 298 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 SCN1AP35498 2009 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 OBSL1O75147 1896 aa15.2■□□□□ 0.02
SMARCA4-206ENST00000538456 NPHP3-ACAD11A0A0J9YXS1 232 aa15.19■□□□□ 0.02
SMARCA4-206ENST00000538456 HNRNPDLO14979 420 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-206ENST00000538456 XPOTO43592 962 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-206ENST00000538456 ZNF806P0C7X5 589 aa15.19■□□□□ 0.02
SMARCA4-206ENST00000538456 ATF6P18850 670 aa15.19■□□□□ 0.02
SMARCA4-206ENST00000538456 LIG4P49917 911 aa15.19■□□□□ 0.02
SMARCA4-206ENST00000538456 LILRA4P59901 499 aa15.19■□□□□ 0.02
SMARCA4-206ENST00000538456 VEPH1Q14D04 833 aa15.19■□□□□ 0.02
SMARCA4-206ENST00000538456 TAF12Q16514 161 aa15.19■□□□□ 0.02
SMARCA4-206ENST00000538456 STPG1Q5TH74 334 aa15.19■□□□□ 0.02
SMARCA4-206ENST00000538456 FAM184AQ8NB25 1140 aa15.19■□□□□ 0.02
SMARCA4-206ENST00000538456 SENP8Q96LD8 212 aa15.19■□□□□ 0.02
SMARCA4-206ENST00000538456 GKN1Q9NS71 199 aa15.19■□□□□ 0.02
SMARCA4-206ENST00000538456 LIMCH1Q9UPQ0 1083 aa15.19■□□□□ 0.02
SMARCA4-206ENST00000538456 SLC8A2Q9UPR5 921 aa15.19■□□□□ 0.02
SMARCA4-206ENST00000538456 TM4SF5O14894 197 aa15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 CDC25CP30307 473 aa15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 NMT1P30419 496 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 RAP1GAPP47736 663 aa15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 GRSF1Q12849 480 aaKnown RBP eCLIP15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 TRIM68Q6AZZ1 485 aa15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 JADE1Q6IE81 842 aa15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 TCEAL6Q6IPX3 200 aa15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 FSTL4Q6MZW2 842 aa15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 DTHD1Q6ZMT9 781 aa15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 GIPC2Q8TF65 315 aa15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 TCEAL3Q969E4 200 aa15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 LOXL4Q96JB6 756 aa15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 LLPHQ9BRT6 129 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 SLC46A2Q9BY10 475 aa15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 EBF3Q9H4W6 596 aa15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 RPF1Q9H9Y2 349 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 IL21Q9HBE4 155 aa15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 CCL26Q9Y258 94 aa15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 GTF3C3Q9Y5Q9 886 aa15.18■□□□□ 0.02
SMARCA4-206ENST00000538456 FAM208BQ5VWN6 2430 aa15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 OTOL1A6NHN0 477 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 LAD1O00515 517 aa15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 FAM189A1O60320 539 aa15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 RNF40O75150 1001 aa15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 NFICP08651 508 aa15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 U2AF2P26368 475 aaKnown RBP eCLIP15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 MPLP40238 635 aa15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 TUFMP49411 452 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-206ENST00000538456 PTPAQ15257 358 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms