RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 AP3M2P53677 418 aa18.65■□□□□ 0.58
USP35-202ENST00000528910 EDRF1Q3B7T1 1238 aa18.65■□□□□ 0.58
USP35-202ENST00000528910 GET4Q7L5D6 327 aaPredicted RBP18.65■□□□□ 0.58
USP35-202ENST00000528910 SMYD4Q8IYR2 804 aaPredicted RBP18.65■□□□□ 0.58
USP35-202ENST00000528910 TMC2Q8TDI7 906 aa18.65■□□□□ 0.58
USP35-202ENST00000528910 ZNF516Q92618 1163 aa18.65■□□□□ 0.58
USP35-202ENST00000528910 SMARCE1Q969G3 411 aa18.65■□□□□ 0.58
USP35-202ENST00000528910 HPDLQ96IR7 371 aa18.65■□□□□ 0.58
USP35-202ENST00000528910 MYADMQ96S97 322 aa18.65■□□□□ 0.58
USP35-202ENST00000528910 GTPBP4Q9BZE4 634 aaKnown RBP18.65■□□□□ 0.58
USP35-202ENST00000528910 CRISPLD1Q9H336 500 aa18.65■□□□□ 0.58
USP35-202ENST00000528910 HCFC1R1Q9NWW0 138 aa18.65■□□□□ 0.58
USP35-202ENST00000528910 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.65■□□□□ 0.58
USP35-202ENST00000528910 DNMT3BQ9UBC3 853 aaKnown RBP18.65■□□□□ 0.58
USP35-202ENST00000528910 SNX9Q9Y5X1 595 aa18.65■□□□□ 0.58
USP35-202ENST00000528910 DENND4CQ5VZ89 1909 aa18.64■□□□□ 0.58
USP35-202ENST00000528910 TULP1O00294 542 aaPredicted RBP18.64■□□□□ 0.57
USP35-202ENST00000528910 GABRDO14764 452 aa18.64■□□□□ 0.57
USP35-202ENST00000528910 GPR37L1O60883 481 aa18.64■□□□□ 0.57
USP35-202ENST00000528910 HUS1O60921 280 aa18.64■□□□□ 0.57
USP35-202ENST00000528910 FSHRP23945 695 aa18.64■□□□□ 0.57
USP35-202ENST00000528910 UBE2HP62256 183 aa18.64■□□□□ 0.57
USP35-202ENST00000528910 NTHL1P78549 312 aa18.64■□□□□ 0.57
USP35-202ENST00000528910 ENPEPQ07075 957 aa18.64■□□□□ 0.57
USP35-202ENST00000528910 SMARCB1Q12824 385 aa18.64■□□□□ 0.57
USP35-202ENST00000528910 PABPC1LQ4VXU2 614 aaKnown RBP18.64■□□□□ 0.57
USP35-202ENST00000528910 CENPPQ6IPU0 288 aa18.64■□□□□ 0.57
USP35-202ENST00000528910 DPH6Q7L8W6 267 aa18.64■□□□□ 0.57
USP35-202ENST00000528910 THEM5Q8N1Q8 247 aa18.64■□□□□ 0.57
USP35-202ENST00000528910 C2orf15Q8WU43 125 aaKnown RBP18.64■□□□□ 0.57
USP35-202ENST00000528910 EDAQ92838 391 aa18.64■□□□□ 0.57
USP35-202ENST00000528910 ERCC4Q92889 916 aaPredicted RBP18.64■□□□□ 0.57
USP35-202ENST00000528910 PGLYRP2Q96PD5 576 aa18.64■□□□□ 0.57
USP35-202ENST00000528910 POLIQ9UNA4 740 aa18.64■□□□□ 0.57
USP35-202ENST00000528910 SORCS3Q9UPU3 1222 aa18.64■□□□□ 0.57
USP35-202ENST00000528910 FRMD4BQ9Y2L6 1034 aa18.64■□□□□ 0.57
USP35-202ENST00000528910 R3HCC1Q9Y3T6 440 aaKnown RBP18.64■□□□□ 0.57
USP35-202ENST00000528910 ZFP37Q9Y6Q3 630 aaPredicted RBP18.64■□□□□ 0.57
USP35-202ENST00000528910 NUP210Q8TEM1 1887 aaPredicted RBP18.63■□□□□ 0.57
USP35-202ENST00000528910 AKAP3O75969 853 aa18.63■□□□□ 0.57
USP35-202ENST00000528910 RPL13P26373 211 aaKnown RBP18.63■□□□□ 0.57
USP35-202ENST00000528910 GBP2P32456 591 aaPredicted RBP18.63■□□□□ 0.57
USP35-202ENST00000528910 PRCPP42785 496 aa18.63■□□□□ 0.57
USP35-202ENST00000528910 ZXDAP98168 799 aa18.63■□□□□ 0.57
USP35-202ENST00000528910 TWF1Q12792 350 aa18.63■□□□□ 0.57
USP35-202ENST00000528910 PLD1Q13393 1074 aa18.63■□□□□ 0.57
USP35-202ENST00000528910 SOWAHAQ2M3V2 549 aa18.63■□□□□ 0.57
USP35-202ENST00000528910 TDRD10Q5VZ19 366 aaKnown RBP18.63■□□□□ 0.57
USP35-202ENST00000528910 CEP135Q66GS9 1140 aa18.63■□□□□ 0.57
USP35-202ENST00000528910 OSTM1Q86WC4 334 aa18.63■□□□□ 0.57
USP35-202ENST00000528910 ADGRF2Q8IZF7 708 aa18.63■□□□□ 0.57
USP35-202ENST00000528910 XYLT2Q9H1B5 865 aa18.63■□□□□ 0.57
USP35-202ENST00000528910 VRTNQ9H8Y1 702 aa18.63■□□□□ 0.57
USP35-202ENST00000528910 GREB1Q4ZG55 1949 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 RHOP08100 348 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 ATICP31939 592 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 EPHA5P54756 1037 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 MCCD1P59942 119 aaPredicted RBP18.62■□□□□ 0.57
USP35-202ENST00000528910 DUSP4Q13115 394 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 MTMR3Q13615 1198 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 SLC5A9Q2M3M2 681 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 SLC39A12Q504Y0 691 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 INTS6LQ5JSJ4 861 aaKnown RBP18.62■□□□□ 0.57
USP35-202ENST00000528910 PRSS36Q5K4E3 855 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 C1orf220Q5T0J3 134 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 CLEC17AQ6ZS10 378 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 LRRTM3Q86VH5 581 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 ZC3H3Q8IXZ2 948 aaKnown RBP18.62■□□□□ 0.57
USP35-202ENST00000528910 TTC9BQ8N6N2 239 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 ATAD1Q8NBU5 361 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 SPPL2BQ8TCT7 592 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 KBTBD7Q8WVZ9 684 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 PKMYT1Q99640 499 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 ACBD6Q9BR61 282 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 MKNK1Q9BUB5 465 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 DNAJC25Q9H1X3 360 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 DDX43Q9NXZ2 648 aaKnown RBP18.62■□□□□ 0.57
USP35-202ENST00000528910 CEP72Q9P209 647 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 IGSF9Q9P2J2 1179 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 LIMD1Q9UGP4 676 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 RAPGEFL1Q9UHV5 662 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 MAN1B1Q9UKM7 699 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 CDH7Q9ULB5 785 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 KMT2EQ8IZD2 1858 aa18.62■□□□□ 0.57
USP35-202ENST00000528910 IKBKBO14920 756 aa18.61■□□□□ 0.57
USP35-202ENST00000528910 CST3P01034 146 aaPredicted RBP18.61■□□□□ 0.57
USP35-202ENST00000528910 C4BPAP04003 597 aaKnown RBP18.61■□□□□ 0.57
USP35-202ENST00000528910 ASGR2P07307 311 aa18.61■□□□□ 0.57
USP35-202ENST00000528910 LAMP2P13473 410 aa18.61■□□□□ 0.57
USP35-202ENST00000528910 PTPN2P17706 415 aa18.61■□□□□ 0.57
USP35-202ENST00000528910 LHX1P48742 406 aa18.61■□□□□ 0.57
USP35-202ENST00000528910 DLG4P78352 724 aa18.61■□□□□ 0.57
USP35-202ENST00000528910 MYL7Q01449 175 aa18.61■□□□□ 0.57
USP35-202ENST00000528910 TSPY1Q01534 308 aa18.61■□□□□ 0.57
USP35-202ENST00000528910 ZACNQ401N2 412 aa18.61■□□□□ 0.57
USP35-202ENST00000528910 TMEM31Q5JXX7 168 aa18.61■□□□□ 0.57
USP35-202ENST00000528910 INTS8Q75QN2 995 aaKnown RBP18.61■□□□□ 0.57
USP35-202ENST00000528910 NPAS3Q8IXF0 933 aa18.61■□□□□ 0.57
USP35-202ENST00000528910 UBALD2Q8IYN6 164 aa18.61■□□□□ 0.57
USP35-202ENST00000528910 DCP1BQ8IZD4 617 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms