RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 BAG1Q99933 345 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P15-201ENST00000507326 EIF2AK1Q9BQI3 630 aaKnown RBP4.06□□□□□ -1.76
HMGB3P15-201ENST00000507326 CPEB1Q9BZB8 566 aaKnown RBP4.06□□□□□ -1.76
HMGB3P15-201ENST00000507326 TRIM6Q9C030 488 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P15-201ENST00000507326 ENKD1Q9H0I2 346 aa4.06□□□□□ -1.76
HMGB3P15-201ENST00000507326 CCDC8Q9H0W5 538 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P15-201ENST00000507326 KCNH6Q9H252 994 aa4.06□□□□□ -1.76
HMGB3P15-201ENST00000507326 CCDC68Q9H2F9 335 aa4.06□□□□□ -1.76
HMGB3P15-201ENST00000507326 SUDS3Q9H7L9 328 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P15-201ENST00000507326 PLEKHA5Q9HAU0 1116 aa4.06□□□□□ -1.76
HMGB3P15-201ENST00000507326 TOPORSQ9NS56 1045 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P15-201ENST00000507326 TOMM22Q9NS69 142 aa4.06□□□□□ -1.76
HMGB3P15-201ENST00000507326 RRN3Q9NYV6 651 aa4.06□□□□□ -1.76
HMGB3P15-201ENST00000507326 PDP2Q9P2J9 529 aa4.06□□□□□ -1.76
HMGB3P15-201ENST00000507326 B4GALT6Q9UBX8 382 aa4.06□□□□□ -1.76
HMGB3P15-201ENST00000507326 RABL2BQ9UNT1 228 aa4.06□□□□□ -1.76
HMGB3P15-201ENST00000507326 MASP2O00187 686 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 FOXN3O00409 490 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 IPO5O00410 1097 aaKnown RBP4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 TOR1BO14657 336 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 GABRDO14764 452 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 NRP1O14786 923 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 CTNND1O60716 968 aaKnown RBP4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 DKC1O60832 514 aaKnown RBP eCLIP4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 ULK1O75385 1050 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 TIPRLO75663 272 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 OFD1O75665 1012 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 KIAA0754O94854 1291 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 APOA4P06727 396 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 PARP1P09874 1014 aaKnown RBP4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 HOXC13P31276 330 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 APOBEC3AP31941 199 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 HOXD12P35452 270 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 CHKAP35790 457 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 CASRP41180 1078 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 FAM189BP81408 668 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 TMF1P82094 1093 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 ICA1Q05084 483 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 GRM3Q14832 879 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 DDB1Q16531 1140 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 STRIP1Q5VSL9 837 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 TAF3Q5VWG9 929 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 TLDC1Q6P9B6 456 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 ZNF449Q6P9G9 518 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 OLFML1Q6UWY5 402 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 RAPH1Q70E73 1250 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 CCDC91Q7Z6B0 441 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 ADGRG3Q86Y34 549 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 DZIP1Q86YF9 867 aaKnown RBP4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 SAMD14Q8IZD0 417 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 CPA6Q8N4T0 437 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 OR52N2Q8NGI0 321 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 GSDMBQ8TAX9 411 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 DEPTORQ8TB45 409 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 NTN5Q8WTR8 489 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 BBC3Q96PG8 261 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 RMDN3Q96TC7 470 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 OSBPL5Q9H0X9 879 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 TOR3AQ9H497 397 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 PRKRIP1Q9H875 184 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 SYNPO2LQ9H987 977 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 ZNF277Q9NRM2 450 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 BLOC1S4Q9NUP1 217 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 TRPM5Q9NZQ8 1165 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 ANKFY1Q9P2R3 1169 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 MTRRQ9UBK8 725 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 SLC13A4Q9UKG4 626 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 AGTPBP1Q9UPW5 1226 aa4.05□□□□□ -1.76
HMGB3P15-201ENST00000507326 TNKSO95271 1327 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 SYNJ2BP-COX16A0A087WUM0 186 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 CBX4O00257 560 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 KIAA0355O15063 1070 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 NCAM2O15394 837 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 IRAK2O43187 625 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 USO1O60763 962 aaKnown RBP4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 PCDH8O95206 1070 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 JMJD7P0C870 316 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 EEF2P13639 858 aaKnown RBP4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 POU3F2P20265 443 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 CAPN3P20807 821 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 SMARCA1P28370 1054 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 STT3AP46977 705 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 ATXN1P54253 815 aaKnown RBP4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 C21orf58P58505 322 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 RNASE9P60153 205 aaKnown RBP4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 CD69Q07108 199 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 GRM1Q13255 1194 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 BLMHQ13867 455 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 CFAP100Q494V2 611 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 DNAJC21Q5F1R6 531 aaKnown RBP4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 HECTD3Q5T447 861 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 IFIT1BQ5T764 474 aaKnown RBP4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 CREB3L3Q68CJ9 461 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 CDCA2Q69YH5 1023 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 XRRA1Q6P2D8 792 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 PGBD2Q6P3X8 592 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 C16orf54Q6UWD8 224 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 ABRAXAS1Q6UWZ7 409 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 Q6YL49 198 aa4.04□□□□□ -1.76
HMGB3P15-201ENST00000507326 DPP9Q86TI2 863 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms