RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 GCNT3O95395 438 aa21.56■■□□□ 1.04
UBE2D3-220ENST00000505307 IDEP14735 1019 aa21.56■■□□□ 1.04
UBE2D3-220ENST00000505307 GJA1P17302 382 aa21.56■■□□□ 1.04
UBE2D3-220ENST00000505307 GARTP22102 1010 aa21.56■■□□□ 1.04
UBE2D3-220ENST00000505307 VIPR2P41587 438 aa21.56■■□□□ 1.04
UBE2D3-220ENST00000505307 VEPH1Q14D04 833 aa21.56■■□□□ 1.04
UBE2D3-220ENST00000505307 C1orf228Q6PIY5 440 aa21.56■■□□□ 1.04
UBE2D3-220ENST00000505307 SYCP3Q8IZU3 236 aa21.56■■□□□ 1.04
UBE2D3-220ENST00000505307 OR10T2Q8NGX3 314 aa21.56■■□□□ 1.04
UBE2D3-220ENST00000505307 CACTINQ8WUQ7 758 aaKnown RBP21.56■■□□□ 1.04
UBE2D3-220ENST00000505307 MSANTD3Q96H12 275 aa21.56■■□□□ 1.04
UBE2D3-220ENST00000505307 PYM1Q9BRP8 204 aaKnown RBP21.56■■□□□ 1.04
UBE2D3-220ENST00000505307 LRRC27Q9C0I9 530 aa21.56■■□□□ 1.04
UBE2D3-220ENST00000505307 GVINP1Q7Z2Y8 2422 aa21.56■■□□□ 1.04
UBE2D3-220ENST00000505307 HEPACAM2A8MVW5 462 aa21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 KPNA7A9QM74 516 aa21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 K7ELQ4 463 aaPredicted RBP21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 NRG2O14511 850 aaPredicted RBP21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 STX6O43752 255 aa21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 KINO60870 393 aaKnown RBP21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 NASPP49321 788 aaPredicted RBP21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 SLC39A12Q504Y0 691 aa21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 ARHGAP15Q53QZ3 475 aa21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 MAMSTRQ6ZN01 415 aa21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 BRSK2Q8IWQ3 736 aa21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 YAF2Q8IY57 180 aa21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 EFCAB13Q8IY85 973 aa21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 SPPL2BQ8TCT7 592 aa21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 TMEM209Q96SK2 561 aa21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 BACH2Q9BYV9 841 aa21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 TMEM206Q9H813 350 aa21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 TBC1D7Q9P0N9 293 aa21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 ZMYM5Q9UJ78 669 aa21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 PCDHGA2Q9Y5H1 932 aa21.55■■□□□ 1.04
UBE2D3-220ENST00000505307 F5P12259 2224 aa21.54■■□□□ 1.04
UBE2D3-220ENST00000505307 KIAA0391O15091 583 aaKnown RBP21.54■■□□□ 1.04
UBE2D3-220ENST00000505307 WEE1P30291 646 aa21.54■■□□□ 1.04
UBE2D3-220ENST00000505307 KCNA1Q09470 495 aa21.54■■□□□ 1.04
UBE2D3-220ENST00000505307 STXBP4Q6ZWJ1 553 aa21.54■■□□□ 1.04
UBE2D3-220ENST00000505307 CCDC65Q8IXS2 484 aa21.54■■□□□ 1.04
UBE2D3-220ENST00000505307 DCP1BQ8IZD4 617 aaKnown RBP21.54■■□□□ 1.04
UBE2D3-220ENST00000505307 FAM213AQ9BRX8 229 aa21.54■■□□□ 1.04
UBE2D3-220ENST00000505307 ATXN3LQ9H3M9 355 aa21.54■■□□□ 1.04
UBE2D3-220ENST00000505307 PANK4Q9NVE7 773 aa21.54■■□□□ 1.04
UBE2D3-220ENST00000505307 OBP2AQ9NY56 170 aa21.54■■□□□ 1.04
UBE2D3-220ENST00000505307 EP300Q09472 2414 aaPredicted RBP21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 SHISA7A6NL88 538 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 CHADO15335 359 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 PDIA4P13667 645 aaKnown RBP21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 CDC25CP30307 473 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 FOXK2Q01167 660 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 CSTF1Q05048 431 aaKnown RBP21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 FCHO2Q0JRZ9 810 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 FZD5Q13467 585 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 STK38Q15208 465 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 MGAT5BQ3V5L5 792 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 WSCD1Q658N2 575 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 GAREM2Q75VX8 874 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 ARID3BQ8IVW6 561 aaPredicted RBP21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 FAM200AQ8TCP9 573 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 CSGALNACT1Q8TDX6 532 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 ATRIPQ8WXE1 791 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 FAM3CQ92520 227 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 GCNAQ96QF7 691 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 SEPT5Q99719 369 aaPredicted RBP21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 FAM126AQ9BYI3 521 aaPredicted RBP21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 PANK2Q9BZ23 570 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 IKZF4Q9H2S9 585 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 CUEDC2Q9H467 287 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 PIAS3Q9Y6X2 628 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 ANK1P16157 1881 aa21.53■■□□□ 1.04
UBE2D3-220ENST00000505307 SCN1AP35498 2009 aa21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 FANCMQ8IYD8 2048 aa21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 DPYSL4O14531 572 aa21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 EXTL3O43909 919 aa21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 GABRR2P28476 465 aa21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 TFAMQ00059 246 aaKnown RBP21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 TSPY1Q01534 308 aa21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 TAF12Q16514 161 aa21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 NFE2Q16621 373 aaPredicted RBP21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 ZNF687Q8N1G0 1237 aa21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 TTC9BQ8N6N2 239 aa21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 LRRC52Q8N7C0 313 aa21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 LINC00301Q8NCQ3 95 aa21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 SPATA18Q8TC71 538 aa21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 ZNF396Q96N95 335 aaPredicted RBP21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 TNMDQ9H2S6 317 aa21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 CHRDQ9H2X0 955 aa21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 C8orf33Q9H7E9 229 aaPredicted RBP21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 ZSCAN32Q9NX65 697 aa21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 RBAKQ9NYW8 714 aaPredicted RBP21.52■■□□□ 1.04
UBE2D3-220ENST00000505307 ARNTLO00327 626 aa21.51■■□□□ 1.03
UBE2D3-220ENST00000505307 PPP6R2O75170 966 aa21.51■■□□□ 1.03
UBE2D3-220ENST00000505307 HAPLN1P10915 354 aaPredicted RBP21.51■■□□□ 1.03
UBE2D3-220ENST00000505307 CASP5P51878 434 aa21.51■■□□□ 1.03
UBE2D3-220ENST00000505307 AMPD3Q01432 767 aa21.51■■□□□ 1.03
UBE2D3-220ENST00000505307 PPP2R5DQ14738 602 aa21.51■■□□□ 1.03
UBE2D3-220ENST00000505307 GPR158Q5T848 1215 aa21.51■■□□□ 1.03
UBE2D3-220ENST00000505307 TMEM86AQ8N2M4 240 aa21.51■■□□□ 1.03
UBE2D3-220ENST00000505307 RUBCNQ92622 972 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms