RNA–Protein interactions for RNA: ENST00000504290.5

TP53-208, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-208ENST00000504290 NEK3P51956 506 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 USP46P62068 366 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 TCP10Q12799 353 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 ITGA9Q13797 1035 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 RASA2Q15283 850 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 PLEKHG4Q58EX7 1191 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 CCDC62Q6P9F0 684 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 IZUMO2Q6UXV1 221 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 PHLDB2Q86SQ0 1253 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 C1orf54Q8WWF1 131 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 SYNPO2Q9UMS6 1093 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 GSTTP1A0A1W2PQM5 241 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 BTBD19C9JJ37 291 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 TYROBPO43914 113 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 ATG7O95352 703 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 BCRP11274 1271 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 EEF2P13639 858 aaKnown RBP12.59□□□□□ -0.39
TP53-208ENST00000504290 VAV1P15498 845 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 CETN2P41208 172 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 HNRNPDQ14103 355 aaKnown RBP12.59□□□□□ -0.39
TP53-208ENST00000504290 ACAD11Q709F0 780 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 ANKS1BQ7Z6G8 1248 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 SPATA24Q86W54 205 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 TRIM55Q9BYV6 548 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 OSBPL8Q9BZF1 889 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 HEY2Q9UBP5 337 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 MTO1Q9Y2Z2 717 aaKnown RBP12.59□□□□□ -0.39
TP53-208ENST00000504290 NUMBLQ9Y6R0 609 aa12.59□□□□□ -0.39
TP53-208ENST00000504290 CLDN3O15551 220 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 ITGA2BP08514 1039 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 RARBP10826 455 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 ESRRAP11474 423 aaPredicted RBP12.58□□□□□ -0.4
TP53-208ENST00000504290 GZMAP12544 262 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 ANPEPP15144 967 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 KRT15P19012 456 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 MAGEA4P43358 317 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 INHBCP55103 352 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 AP2B1P63010 937 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 MAP3K10Q02779 954 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 VAC14Q08AM6 782 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 R3HDM1Q15032 1099 aaKnown RBP12.58□□□□□ -0.4
TP53-208ENST00000504290 SLC1A5Q15758 541 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 IER5LQ5T953 404 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 C6orf163Q5TEZ5 329 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 FAM91A1Q658Y4 838 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 SLFN13Q68D06 897 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 TTBK2Q6IQ55 1244 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 SH3BP5LQ7L8J4 393 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 NET1Q7Z628 596 aaPredicted RBP12.58□□□□□ -0.4
TP53-208ENST00000504290 ANKRD23Q86SG2 305 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 RTKN2Q8IZC4 609 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 CCDC89Q8N998 374 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 SYT2Q8N9I0 419 aaPredicted RBP12.58□□□□□ -0.4
TP53-208ENST00000504290 GMCL1P1Q8NEA9 526 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 PSPC1Q8WXF1 523 aaKnown RBP12.58□□□□□ -0.4
TP53-208ENST00000504290 C9orf72Q96LT7 481 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 INTS2Q9H0H0 1204 aaKnown RBP12.58□□□□□ -0.4
TP53-208ENST00000504290 ZDHHC7Q9NXF8 308 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 WASF2Q9Y6W5 498 aa12.58□□□□□ -0.4
TP53-208ENST00000504290 FOXN3O00409 490 aaPredicted RBP12.57□□□□□ -0.4
TP53-208ENST00000504290 CLIC2O15247 247 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 PPP1R11O60927 126 aaPredicted RBP12.57□□□□□ -0.4
TP53-208ENST00000504290 ZBED4O75132 1171 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 LGR5O75473 907 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 GCAP28676 217 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 PGM1P36871 562 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 RGS2P41220 211 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 CACNB3P54284 484 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 ABCB5Q2M3G0 1257 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 TRMT5Q32P41 509 aaKnown RBP12.57□□□□□ -0.4
TP53-208ENST00000504290 KLC3Q6P597 504 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 LVRNQ6Q4G3 990 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 RINLQ6ZS11 566 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 KCTD1Q719H9 257 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 MYLK4Q86YV6 388 aaPredicted RBP12.57□□□□□ -0.4
TP53-208ENST00000504290 PIP4K2CQ8TBX8 421 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 REEP2Q9BRK0 252 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 VPS33BQ9H267 617 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 NDE1Q9NXR1 346 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 TMOD2Q9NZR1 351 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 KANSL3Q9P2N6 904 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 PCDHAC2Q9Y5I4 1007 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 USP17L10C9JJH3 530 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 ATP6V1G1O75348 118 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 SLC34A2O95436 690 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 ARFIP2P53365 341 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 ARHGAP44Q17R89 818 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.57□□□□□ -0.4
TP53-208ENST00000504290 ZNF564Q8TBZ8 553 aaPredicted RBP12.57□□□□□ -0.4
TP53-208ENST00000504290 SKA1Q96BD8 255 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 GMCL1Q96IK5 515 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 DYDC2Q96IM9 177 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 GPAMQ9HCL2 828 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 CHST7Q9NS84 486 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 ETNK2Q9NVF9 386 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 PTTG2Q9NZH5 202 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 UVRAGQ9P2Y5 699 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 DNM3Q9UQ16 869 aa12.57□□□□□ -0.4
TP53-208ENST00000504290 EIF3DO15371 548 aaKnown RBP eCLIP12.56□□□□□ -0.4
TP53-208ENST00000504290 HNRNPRO43390 633 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms